source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	3129306	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B31,C40
typical_cds_rare	Chr1	3129308	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	A11,C59
typical_cds_rare	Chr1	3129314	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B68,C4
typical_cds_rare	Chr1	3129315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	C14,C69
typical_cds_rare	Chr1	3129320	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	C14,C69
typical_cds_rare	Chr1	3129342	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C74
typical_cds_rare	Chr1	3129350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B75
typical_cds_rare	Chr1	3129357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	4	C17,C62,C69,D2
lof_cds	Chr1	3129381	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	44	A25,B100,B103,B117,B120,B125,B14,B18,B23,B29,B30,B33,B35,B41,B44,B46,B59,B6,B60,B63,B72,B75,B8,B85,B86,B90,B91,B97,C13,C14,C18,C21,C24,C3,C37,C39,C56,C63,C67,C77,C79,C83,C9,D8
typical_cds_rare	Chr1	3129454	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	D11
typical_cds_rare	Chr1	3129484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C9
typical_cds_rare	Chr1	3129522	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B23
typical_cds_rare	Chr1	3129539	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	4	A23,B22,B65,C6
typical_cds_rare	Chr1	3129550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B103
typical_cds_rare	Chr1	3129609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B103
typical_cds_rare	Chr1	3129611	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B103
typical_cds_rare	Chr1	3129656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B140,C55
typical_cds_rare	Chr1	3129721	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	C33,C37
typical_cds_rare	Chr1	3129860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	3	A19,B6,D9
typical_cds_rare	Chr1	3129863	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	3	A19,B6,D9
typical_cds_rare	Chr1	3129882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	3	B105,C40,C62
typical_cds_rare	Chr1	3129933	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B140,C55
typical_cds_rare	Chr1	3129935	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B113,B28
typical_cds_rare	Chr1	3129952	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C42
lof_cds	Chr1	3129970	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	25	B106,B11,B127,B138,B16,B29,B36,B44,B56,B58,B60,B71,B74,B96,C17,C18,C2,C38,C4,C43,C58,C6,C62,C72,C78
typical_cds_rare	Chr1	3129972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	3	B90,B92,D10
typical_cds_rare	Chr1	3130025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	3	A18,B140,C41
typical_cds_rare	Chr1	3130087	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B104
typical_cds_rare	Chr1	3130143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B92,D10
typical_cds_rare	Chr1	3130203	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C37
lof_cds	Chr1	3130266	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	77	A11,A15,A16,A18,A20,A8,B103,B108,B121,B127,B128,B129,B132,B14,B140,B15,B16,B23,B29,B30,B35,B40,B41,B44,B48,B56,B58,B59,B6,B60,B61,B63,B65,B70,B71,B72,B73,B74,B75,B79,B8,B83,B86,B88,B89,B92,B95,B97,C1,C13,C18,C19,C21,C24,C26,C3,C31,C36,C37,C40,C46,C53,C55,C56,C58,C6,C62,C63,C67,C70,C72,C73,C81,C84,C9,D5,D9
lof_cds	Chr1	3130423	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B100
typical_cds_rare	Chr1	3130423	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B100
lof_cds	Chr1	3130523	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	25	A14,B104,B108,B126,B127,B17,B23,B3,B33,B37,B69,B72,B81,B83,B97,C17,C20,C23,C3,C38,C45,C47,C81,D4,D7
typical_cds_rare	Chr1	3130531	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C37
typical_cds_rare	Chr1	3130540	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	5	A15,A6,B70,C55,C75
typical_cds_rare	Chr1	3130590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	A11,B44
typical_cds_rare	Chr1	3130615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	D7
typical_cds_rare	Chr1	3130671	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B140,C55
lof_cds	Chr1	3130681	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	107	A10,A13,A14,A15,A19,A20,A22,A23,A24,A25,A3,A5,A6,A7,A9,B105,B107,B108,B109,B11,B110,B111,B112,B113,B118,B119,B12,B120,B121,B125,B13,B130,B132,B135,B137,B14,B20,B23,B27,B28,B33,B34,B37,B40,B5,B51,B54,B57,B6,B62,B64,B65,B66,B67,B69,B70,B76,B77,B82,B84,B89,B91,B94,C12,C13,C14,C17,C18,C2,C20,C21,C23,C25,C27,C29,C30,C31,C33,C34,C39,C4,C41,C45,C5,C50,C52,C53,C55,C57,C58,C61,C62,C64,C66,C7,C70,C75,C76,C78,C8,C80,C82,C83,C84,D3,D4,D7
lof_cds	Chr1	3130689	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C53
typical_cds_rare	Chr1	3130689	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C53
lof_cds	Chr1	3130836	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	7	A7,B129,B14,B35,B40,C13,C73
lof_cds	Chr1	3130845	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B138
typical_cds_rare	Chr1	3130845	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B138
typical_cds_rare	Chr1	3130879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B21
typical_cds_rare	Chr1	3130914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	4	A25,B106,B63,B71
typical_cds_rare	Chr1	3130929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B98
typical_cds_rare	Chr1	3131120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	B41
typical_cds_rare	Chr1	3131135	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	4	A25,C17,C29,C74
typical_cds_rare	Chr1	3131161	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	5	B112,B35,B65,B72,C63
typical_cds_rare	Chr1	3131164	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	D2
typical_cds_rare	Chr1	3131172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B28,B41
typical_cds_rare	Chr1	3131174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	B28,B41
typical_cds_rare	Chr1	3131178	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	3	B28,B41,C52
typical_cds_rare	Chr1	3131211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	4	A15,C17,C39,D10
typical_cds_rare	Chr1	3131220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	3	B89,C23,C64
typical_cds_rare	Chr1	3131224	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	2	C49,D3
lof_cds	Chr1	3131229	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C87
typical_cds_rare	Chr1	3131229	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131025928	SmilChr01G000181	131025928	rna-XM_057955894.1	1	C87