source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	3383290	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B2
typical_cds_rare	Chr1	3383297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B72
lof_cds	Chr1	3383390	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C9
typical_cds_rare	Chr1	3383390	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C9
lof_cds	Chr1	3383404	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	6	B119,B55,B65,B72,B79,C48
lof_cds	Chr1	3383424	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	B52,D9
typical_cds_rare	Chr1	3383424	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	B52,D9
typical_cds_rare	Chr1	3383442	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	A14,B71
typical_cds_rare	Chr1	3383464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B75
typical_cds_rare	Chr1	3383478	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	A23,B14,B56,C73,C75
lof_cds	Chr1	3383507	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	A21
typical_cds_rare	Chr1	3383507	A	AC	INDEL	1bp_insertion	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	A21
typical_cds_rare	Chr1	3383513	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C73
typical_cds_rare	Chr1	3383528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	A9,B82
typical_cds_rare	Chr1	3383543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	A22,B21,C38
typical_cds_rare	Chr1	3383558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B62
typical_cds_rare	Chr1	3383571	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	B125,B6,D10
typical_cds_rare	Chr1	3383575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	A8,B111
lof_cds	Chr1	3383598	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	7	A13,B104,B14,B20,B23,B6,B88
typical_cds_rare	Chr1	3383603	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	B6,B66
lof_cds	Chr1	3383621	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B130,C27,C8,D6
typical_cds_rare	Chr1	3383621	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B130,C27,C8,D6
typical_cds_rare	Chr1	3383654	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	A15,B59,C32
typical_cds_rare	Chr1	3383655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B75
typical_cds_rare	Chr1	3383671	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	B69,C74
typical_cds_rare	Chr1	3383682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	B123,B138,B67,C23,C87
typical_cds_rare	Chr1	3383685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C14
typical_cds_rare	Chr1	3383687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B93,C16,C33,C65
typical_cds_rare	Chr1	3383756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	B125,B42,B72,C18,C41
typical_cds_rare	Chr1	3383757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C8
typical_cds_rare	Chr1	3383775	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	C10,C6
lof_cds	Chr1	3383777	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	19	A6,A9,B12,B126,B13,B130,B20,B21,B32,B58,C16,C22,C26,C45,C50,C73,C76,C81,D4
typical_cds_rare	Chr1	3383780	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	B73,B89,C22
typical_cds_rare	Chr1	3383785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B14,C56,C64,D8
lof_cds	Chr1	3383794	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B120,B138,C15,C39
typical_cds_rare	Chr1	3383794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B120,B138,C15,C39
lof_cds	Chr1	3383801	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	6	B104,B16,B50,C21,C54,C78
typical_cds_rare	Chr1	3383841	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	B103,B30,C29,C30,C35
typical_cds_rare	Chr1	3383849	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	B38,B78,D9
typical_cds_rare	Chr1	3383854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B63,C49,C5,D7
typical_cds_rare	Chr1	3383859	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B60,B77,C44,C63
typical_cds_rare	Chr1	3383862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	A6,B53,C16,C30
typical_cds_rare	Chr1	3383868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	B63,C49,D7
typical_cds_rare	Chr1	3383881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B10
typical_cds_rare	Chr1	3383882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	B31,B38,B55,B78,D9
typical_cds_rare	Chr1	3383885	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	C51,C55
typical_cds_rare	Chr1	3383887	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B112,B121,C3,C47
typical_cds_rare	Chr1	3383891	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C8
typical_cds_rare	Chr1	3383907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B130
typical_cds_rare	Chr1	3383912	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	B38,C71,C83
typical_cds_rare	Chr1	3383926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C8
typical_cds_rare	Chr1	3383936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B102,B110,C50,C68
typical_cds_rare	Chr1	3383941	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C71
typical_cds_rare	Chr1	3383944	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C46
typical_cds_rare	Chr1	3383958	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B52,B70,B71,C62
typical_cds_rare	Chr1	3384010	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C46
typical_cds_rare	Chr1	3384069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B19
typical_cds_rare	Chr1	3384073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	C48,C86
typical_cds_rare	Chr1	3384092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	B104,B107,B37
typical_cds_rare	Chr1	3384112	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	C68,D10
typical_cds_rare	Chr1	3384121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B19
typical_cds_rare	Chr1	3384136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	A15,B9,C38
typical_cds_rare	Chr1	3384143	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B40
typical_cds_rare	Chr1	3384170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C24
typical_cds_rare	Chr1	3384171	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	B104,B109,B70,B71,C62
typical_cds_rare	Chr1	3384192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B130
typical_cds_rare	Chr1	3384215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	B128,B130
typical_cds_rare	Chr1	3384216	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	B104,B52,B70,B71,C62
typical_cds_rare	Chr1	3384271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B12,B40,B78,D11
typical_cds_rare	Chr1	3384272	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C46
typical_cds_rare	Chr1	3384273	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C17
typical_cds_rare	Chr1	3384278	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B77
lof_cds	Chr1	3384280	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	21	A13,B100,B109,B112,B12,B130,B17,B22,B29,B3,B32,B33,B48,C14,C24,C25,C47,C61,C76,C83,D1
typical_cds_rare	Chr1	3384293	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	C46
typical_cds_rare	Chr1	3384301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B78
typical_cds_rare	Chr1	3384325	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	5	A13,B12,B130,B78,C47
typical_cds_rare	Chr1	3384342	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	4	B36,C51,C6,C77
typical_cds_rare	Chr1	3384345	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	3	A15,B9,C38
typical_cds_rare	Chr1	3384368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	2	B122,C6
typical_cds_rare	Chr1	3384413	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987201	SmilChr01G000197	130987201	rna-XM_057911081.1	1	B130