source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	4393318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	A4
typical_cds_rare	Chr1	4393330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B113
lof_cds	Chr1	4393357	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	63	A13,A14,A16,A21,A22,A25,A7,B100,B108,B111,B112,B115,B117,B121,B126,B128,B133,B134,B136,B15,B16,B18,B31,B34,B35,B46,B47,B48,B49,B5,B52,B58,B60,B63,B7,B73,B75,B79,B80,B93,B98,C11,C15,C16,C24,C32,C36,C43,C45,C47,C49,C59,C6,C68,C69,C71,C82,C85,D1,D10,D2,D4,D9
typical_cds_rare	Chr1	4393377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
typical_cds_rare	Chr1	4393390	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	C85
typical_cds_rare	Chr1	4393399	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	C77,D1
typical_cds_rare	Chr1	4393403	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	A16
typical_cds_rare	Chr1	4393414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	C85
typical_cds_rare	Chr1	4393434	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	C23
typical_cds_rare	Chr1	4393437	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	C23
typical_cds_rare	Chr1	4393443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	C23
lof_cds	Chr1	4393446	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	10	A16,A19,A6,B43,B58,B82,B97,C26,D3,D8
lof_cds	Chr1	4393460	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	157	A1,A10,A13,A14,A18,A2,A20,A21,A23,A24,A25,A4,A5,A7,A8,A9,B102,B103,B105,B107,B108,B109,B11,B110,B111,B112,B114,B118,B12,B121,B122,B123,B124,B127,B129,B13,B131,B132,B133,B134,B136,B137,B138,B16,B18,B2,B20,B21,B23,B25,B28,B3,B30,B31,B33,B37,B38,B39,B4,B40,B45,B46,B49,B50,B51,B53,B54,B55,B56,B57,B59,B6,B60,B62,B63,B64,B66,B67,B69,B7,B70,B71,B72,B75,B76,B78,B8,B83,B84,B85,B86,B88,B92,B93,B96,B98,B99,C1,C10,C11,C13,C18,C21,C23,C25,C27,C28,C29,C3,C30,C31,C33,C34,C35,C37,C38,C40,C41,C43,C45,C46,C49,C51,C52,C53,C56,C57,C58,C59,C6,C61,C63,C64,C65,C67,C69,C70,C73,C75,C77,C78,C79,C8,C80,C81,C82,C84,C85,C86,C87,D11,D2,D3,D4,D7,D8,D9
typical_cds_rare	Chr1	4393483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	C45,D10
lof_cds	Chr1	4393498	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B10,B17
typical_cds_rare	Chr1	4393498	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B10,B17
lof_cds	Chr1	4393523	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	22	A16,A2,A20,A9,B106,B120,B140,B20,B71,B77,B94,C10,C19,C21,C30,C33,C51,C55,C62,C7,C8,D11
typical_cds_rare	Chr1	4393537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	4	A2,B122,C84,D10
typical_cds_rare	Chr1	4393555	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	C45,D10
lof_cds	Chr1	4393569	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	197	A1,A10,A13,A14,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B10,B100,B101,B102,B103,B105,B106,B107,B108,B109,B11,B110,B111,B112,B114,B115,B117,B118,B119,B12,B121,B122,B123,B124,B127,B128,B129,B130,B131,B132,B133,B134,B136,B137,B138,B14,B15,B16,B17,B18,B19,B2,B20,B21,B23,B24,B25,B28,B29,B3,B30,B31,B33,B34,B37,B38,B39,B4,B40,B45,B46,B49,B50,B51,B53,B54,B55,B56,B57,B59,B6,B60,B62,B63,B64,B66,B67,B69,B7,B70,B71,B72,B74,B75,B76,B78,B79,B8,B82,B83,B84,B85,B86,B87,B88,B9,B90,B92,B93,B96,B98,B99,C1,C10,C11,C13,C16,C18,C19,C2,C20,C21,C23,C25,C27,C28,C29,C3,C30,C31,C33,C34,C35,C36,C37,C38,C39,C40,C41,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C53,C56,C57,C58,C59,C6,C61,C63,C64,C65,C66,C67,C69,C70,C71,C73,C75,C76,C77,C78,C79,C8,C80,C81,C82,C84,C85,C86,C87,C9,D11,D2,D3,D4,D5,D7,D8,D9
typical_cds_rare	Chr1	4393573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B113,B47
typical_cds_rare	Chr1	4393580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	C45,D10
typical_cds_rare	Chr1	4393586	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
typical_cds_rare	Chr1	4393604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	C15
typical_cds_rare	Chr1	4393651	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
lof_cds	Chr1	4393668	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	45	A11,A15,A18,A22,A3,A4,B1,B111,B125,B126,B130,B14,B17,B24,B28,B33,B42,B43,B52,B58,B63,B65,B73,B74,B75,B9,B90,B92,C12,C16,C20,C22,C26,C29,C4,C42,C48,C49,C5,C57,C60,C62,C68,C7,C87
lof_cds	Chr1	4393674	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	17	A16,A6,B126,B139,B22,B30,B32,B42,B43,B58,B82,B97,B99,C26,C35,C9,D3
lof_cds	Chr1	4393713	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B98
typical_cds_rare	Chr1	4393713	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B98
typical_cds_rare	Chr1	4393744	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D11
typical_cds_rare	Chr1	4393757	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	5	A3,B74,B90,C54,C66
typical_cds_rare	Chr1	4393771	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B10,B17
typical_cds_rare	Chr1	4393787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	A14,C82
typical_cds_rare	Chr1	4393795	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B60
lof_cds	Chr1	4393831	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
typical_cds_rare	Chr1	4393831	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
typical_cds_rare	Chr1	4393854	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	3	A4,B13,D7
lof_cds	Chr1	4393856	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B10,B17
typical_cds_rare	Chr1	4393856	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B10,B17
typical_cds_rare	Chr1	4393860	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B64
typical_cds_rare	Chr1	4393868	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	A16,B103
lof_cds	Chr1	4393883	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	5	B77,B94,C51,C62,D11
typical_cds_rare	Chr1	4393883	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	5	B77,B94,C51,C62,D11
lof_cds	Chr1	4393884	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B103
typical_cds_rare	Chr1	4393884	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B103
typical_cds_rare	Chr1	4393896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B113
typical_cds_rare	Chr1	4393931	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	5	B111,B74,B92,C54,C68
typical_cds_rare	Chr1	4393946	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B113
typical_cds_rare	Chr1	4393948	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
typical_cds_rare	Chr1	4393951	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	4	B113,C24,C78,D7
typical_cds_rare	Chr1	4394031	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B109
typical_cds_rare	Chr1	4394084	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	4	B117,B46,B93,C85
typical_cds_rare	Chr1	4394094	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	3	B102,C23,D9
typical_cds_rare	Chr1	4394110	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	3	B102,C23,D9
typical_cds_rare	Chr1	4394150	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	A13,B136
typical_cds_rare	Chr1	4394261	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	4	B11,B124,B8,C31
typical_cds_rare	Chr1	4394273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	4	B81,C21,C30,C62
typical_cds_rare	Chr1	4394289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B13,D7
typical_cds_rare	Chr1	4394315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	C77,D1
lof_cds	Chr1	4394334	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
typical_cds_rare	Chr1	4394334	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	D10
lof_cds	Chr1	4394338	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	7	B20,B81,B92,C19,C21,C30,C62
typical_cds_rare	Chr1	4394347	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	C77,D1
typical_cds_rare	Chr1	4394378	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	3	B125,B90,B92
typical_cds_rare	Chr1	4394453	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B98,B99
typical_cds_rare	Chr1	4394481	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	1	B65
typical_cds_rare	Chr1	4394485	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B68,B71
typical_cds_rare	Chr1	4394772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B126,B61
typical_cds_rare	Chr1	4394778	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	5	B41,B67,B73,C10,C77
typical_cds_rare	Chr1	4394797	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	2	B106,B90
typical_cds_rare	Chr1	4394800	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005691	SmilChr01G000233	131005691	rna-XM_057932757.1	5	A5,B124,B80,C25,C31