source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	5531769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B102,B12,B22,D7
typical_cds_rare	Chr1	5531794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B118,B24,C45
typical_cds_rare	Chr1	5531795	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	D6
typical_cds_rare	Chr1	5531804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B52,B60,B8,B85
typical_cds_rare	Chr1	5531817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B22
typical_cds_rare	Chr1	5531818	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B128,B75,C73
typical_cds_rare	Chr1	5531822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B52,B60,B8,B85
typical_cds_rare	Chr1	5531823	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	C35
typical_cds_rare	Chr1	5531833	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	C18,C19,C82
lof_cds	Chr1	5531868	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B137,B43,B52,C77,D8
typical_cds_rare	Chr1	5531868	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B137,B43,B52,C77,D8
lof_cds	Chr1	5531872	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	42	A10,A14,A19,A3,A9,B1,B100,B108,B109,B11,B117,B123,B126,B137,B138,B20,B26,B28,B32,B37,B42,B46,B49,B61,B7,B81,B87,B89,B9,B90,C22,C23,C26,C34,C40,C49,C53,C57,C60,C70,C75,D4
typical_cds_rare	Chr1	5531882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B139,B4,B97
typical_cds_rare	Chr1	5531906	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B14
typical_cds_rare	Chr1	5531908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	A5
typical_cds_rare	Chr1	5531914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B59
typical_cds_rare	Chr1	5531917	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B102,B12,B22,B4,D7
typical_cds_rare	Chr1	5531920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B103,C42,C75
typical_cds_rare	Chr1	5531925	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B129,B55,B94,D8
typical_cds_rare	Chr1	5531931	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B13
typical_cds_rare	Chr1	5531942	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	A5,B129
typical_cds_rare	Chr1	5531943	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	A5,B104,B63
typical_cds_rare	Chr1	5531958	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B126
typical_cds_rare	Chr1	5531967	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B49,B50,C9
lof_cds	Chr1	5531988	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	A15,A20,B48,C81,D10
typical_cds_rare	Chr1	5531988	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	A15,A20,B48,C81,D10
typical_cds_rare	Chr1	5532007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	A5,C58,D10
typical_cds_rare	Chr1	5532011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B104,B106,B124,B66,C55
typical_cds_rare	Chr1	5532021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B104,B9,C5,C66
typical_cds_rare	Chr1	5532033	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	A5,C58,D10
typical_cds_rare	Chr1	5532036	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B12
typical_cds_rare	Chr1	5532044	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B117,C18,D1
typical_cds_rare	Chr1	5532047	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B104,B128
lof_cds	Chr1	5532053	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	24	A11,A2,A24,A6,B103,B104,B119,B127,B138,B15,B29,B40,B56,B57,B85,B94,B96,C1,C24,C37,C49,C56,C74,C86
typical_cds_rare	Chr1	5532076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B15,B4,B41,B69,C15
lof_cds	Chr1	5532078	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B81,B98,C55
typical_cds_rare	Chr1	5532078	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B81,B98,C55
typical_cds_rare	Chr1	5532121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B63
typical_cds_rare	Chr1	5532130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	A25,B117,C12
typical_cds_rare	Chr1	5532146	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	A8,B84,B97,C39,C56
typical_cds_rare	Chr1	5532159	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B135,B28,D9
typical_cds_rare	Chr1	5532160	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B81
typical_cds_rare	Chr1	5532161	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B20,B40,C58,C82
typical_cds_rare	Chr1	5532221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B135,D9
typical_cds_rare	Chr1	5532227	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B139,B97
typical_cds_rare	Chr1	5532248	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B82,B85,C30
lof_cds	Chr1	5532268	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B12,B22,B4,D11,D7
typical_cds_rare	Chr1	5532268	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B12,B22,B4,D11,D7
typical_cds_rare	Chr1	5532272	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	A1,B105,C73,C86
typical_cds_rare	Chr1	5532293	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	A23,B86
typical_cds_rare	Chr1	5532302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	A25,B130,C12
typical_cds_rare	Chr1	5532312	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B85,C30
typical_cds_rare	Chr1	5532329	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B75,D11
typical_cds_rare	Chr1	5532357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B140
typical_cds_rare	Chr1	5532384	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	A18,C42
typical_cds_rare	Chr1	5532400	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B41,B49,B50,C9
lof_cds	Chr1	5532418	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B52,B57,C28,C55
typical_cds_rare	Chr1	5532418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B52,B57,C28,C55
typical_cds_rare	Chr1	5532425	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B1,B106,B66,C55,C83
typical_cds_rare	Chr1	5532447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B104,B128,B83,C73
typical_cds_rare	Chr1	5532461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	A23,B86
typical_cds_rare	Chr1	5532462	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B1,B106,B66,C55,C83
typical_cds_rare	Chr1	5532508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B135,B28,C78,D9
typical_cds_rare	Chr1	5532533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B101,B109
typical_cds_rare	Chr1	5532543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B127,B44
typical_cds_rare	Chr1	5532582	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B63
lof_cds	Chr1	5532587	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	148	A1,A10,A11,A13,A2,A22,A23,A24,A3,A5,A6,A8,A9,B10,B101,B105,B106,B107,B109,B110,B111,B114,B117,B118,B122,B123,B124,B125,B128,B129,B130,B131,B133,B134,B135,B136,B137,B138,B139,B14,B140,B17,B18,B19,B20,B21,B23,B24,B25,B27,B29,B3,B30,B31,B32,B33,B35,B36,B38,B39,B4,B45,B46,B47,B49,B5,B50,B53,B54,B55,B56,B57,B58,B59,B64,B66,B67,B68,B7,B74,B75,B76,B77,B79,B8,B80,B83,B84,B85,B87,B88,B98,C12,C13,C14,C16,C17,C18,C20,C22,C24,C25,C27,C30,C31,C32,C33,C36,C37,C38,C4,C40,C41,C43,C44,C45,C47,C48,C49,C50,C51,C52,C53,C57,C58,C59,C6,C60,C61,C63,C65,C67,C68,C69,C70,C72,C73,C75,C77,C79,C8,C83,C84,C86,C9,D1,D4,D5
typical_cds_rare	Chr1	5532589	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B106,B124,B66,C55,C83
typical_cds_rare	Chr1	5532604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	C37
typical_cds_rare	Chr1	5532629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B99
typical_cds_rare	Chr1	5532633	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B140,B78
lof_cds	Chr1	5532655	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	22	A11,B1,B103,B104,B129,B20,B36,B38,B53,B57,B71,C12,C13,C25,C30,C31,C51,C54,C6,C66,C74,C77
typical_cds_rare	Chr1	5532659	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	C23,C26
typical_cds_rare	Chr1	5532664	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	C58
lof_cds	Chr1	5532665	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	10	A11,A2,B78,B93,C2,C61,C64,C65,C66,D11
lof_cds	Chr1	5532675	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	81	A10,A14,A22,A4,A7,A9,B1,B100,B103,B108,B11,B111,B115,B117,B120,B121,B125,B126,B127,B132,B133,B135,B14,B18,B2,B20,B23,B26,B3,B32,B42,B43,B46,B47,B48,B54,B56,B59,B60,B61,B63,B65,B66,B72,B73,B78,B81,B85,B86,B87,B89,B90,B91,B92,B93,B95,B96,C1,C14,C16,C20,C21,C22,C26,C3,C34,C44,C48,C5,C53,C54,C57,C61,C66,C70,C77,C8,C84,C85,C87,D10
lof_cds	Chr1	5532676	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	122	A1,A11,A13,A15,A16,A18,A2,A21,A24,A25,A3,A4,A5,A8,B102,B106,B107,B109,B111,B112,B113,B117,B121,B123,B124,B126,B129,B13,B130,B131,B133,B136,B138,B139,B14,B140,B16,B17,B19,B21,B22,B25,B29,B31,B34,B35,B36,B4,B41,B44,B47,B49,B51,B52,B55,B58,B59,B6,B61,B64,B66,B68,B69,B7,B70,B74,B75,B77,B78,B79,B8,B80,B83,B84,B88,B92,B97,B98,C10,C12,C13,C15,C17,C18,C19,C20,C24,C25,C27,C28,C29,C30,C31,C36,C37,C41,C42,C43,C45,C47,C48,C49,C56,C58,C59,C6,C60,C63,C67,C73,C76,C78,C8,C86,C87,C9,D1,D10,D2,D5,D7,D9
lof_cds	Chr1	5532685	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B136,B83
typical_cds_rare	Chr1	5532685	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B136,B83
typical_cds_rare	Chr1	5532707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B102,B12,B22,B4
typical_cds_rare	Chr1	5532712	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B135,B28
typical_cds_rare	Chr1	5532714	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B2
typical_cds_rare	Chr1	5532755	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B101,B136,B83
typical_cds_rare	Chr1	5532760	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B1,B106,B97,C83
typical_cds_rare	Chr1	5532761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	C87
typical_cds_rare	Chr1	5532772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B104,B128,C73
typical_cds_rare	Chr1	5532811	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	C1,C6
lof_cds	Chr1	5532817	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	C35
typical_cds_rare	Chr1	5532817	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	C35
typical_cds_rare	Chr1	5532829	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B104,B46,B82,C61
typical_cds_rare	Chr1	5532831	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	A11,B139,B4,B66,B97
typical_cds_rare	Chr1	5532896	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	A21,B122,B22,B68,C42
typical_cds_rare	Chr1	5532902	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	C23,C26
typical_cds_rare	Chr1	5532915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	B126,B9,B95,C44
typical_cds_rare	Chr1	5532941	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B128
typical_cds_rare	Chr1	5532956	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B66
typical_cds_rare	Chr1	5532965	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B131,B76
typical_cds_rare	Chr1	5532982	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	A24,B104,B4,B97
typical_cds_rare	Chr1	5532984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B131,B76
lof_cds	Chr1	5532987	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	68	A14,A16,A19,A25,A5,B100,B108,B111,B112,B113,B115,B119,B121,B122,B123,B126,B128,B13,B133,B136,B16,B18,B20,B31,B33,B34,B35,B40,B41,B42,B43,B48,B49,B5,B51,B52,B58,B60,B62,B7,B72,B73,B75,B79,B80,B98,C11,C15,C24,C30,C36,C38,C43,C46,C47,C49,C6,C63,C67,C69,C76,C8,C83,D1,D2,D4,D6,D9
typical_cds_rare	Chr1	5533001	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B11,C27,C41
lof_cds	Chr1	5533013	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	124	A15,A19,A23,A24,A5,A7,B1,B10,B100,B102,B103,B105,B106,B107,B11,B112,B120,B123,B124,B125,B126,B127,B13,B131,B133,B134,B136,B139,B14,B16,B17,B19,B22,B23,B25,B28,B29,B30,B31,B34,B35,B36,B37,B38,B39,B40,B41,B42,B43,B45,B46,B48,B49,B51,B55,B56,B6,B60,B62,B63,B64,B67,B69,B71,B72,B78,B79,B8,B84,B86,B88,B9,B90,B92,B96,B99,C1,C10,C12,C14,C17,C18,C19,C20,C21,C23,C25,C27,C28,C3,C31,C33,C36,C38,C39,C42,C44,C49,C5,C54,C56,C57,C58,C6,C62,C63,C64,C65,C66,C67,C7,C70,C71,C73,C76,C77,C78,C79,C9,D2,D3,D6,D7,D9
lof_cds	Chr1	5533062	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	A23,B125,B86,C17
typical_cds_rare	Chr1	5533062	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	A23,B125,B86,C17
lof_cds	Chr1	5533063	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	11	A10,A16,A2,B122,B125,B128,B33,B44,C36,C39,C73
typical_cds_rare	Chr1	5533068	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B104
typical_cds_rare	Chr1	5533077	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	4	A7,B78,C19,C73
lof_cds	Chr1	5533109	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	24	A7,B106,B120,B130,B25,B35,B51,B59,B66,B74,B8,B80,B81,B82,B83,B95,C24,C25,C28,C31,C34,C53,C78,C8
typical_cds_rare	Chr1	5533132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B104
typical_cds_rare	Chr1	5533141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B138
typical_cds_rare	Chr1	5533166	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B41
typical_cds_rare	Chr1	5533178	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	A25,C18
typical_cds_rare	Chr1	5533197	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	1	B135
lof_cds	Chr1	5533198	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	7	A21,B122,B22,B31,B68,B88,C42
typical_cds_rare	Chr1	5533208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B44,D9
typical_cds_rare	Chr1	5533209	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B85,C84
typical_cds_rare	Chr1	5533220	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B85,C84
typical_cds_rare	Chr1	5533229	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	5	B52,B57,B83,B98,C55
typical_cds_rare	Chr1	5533244	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	B104,B128
lof_cds	Chr1	5533251	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	35	A15,A2,A20,A23,B102,B121,B140,B22,B26,B34,B44,B48,B53,B58,B63,B64,B7,B70,B83,B99,C1,C15,C19,C20,C23,C26,C29,C40,C59,C77,C79,C81,C87,D10,D5
lof_cds	Chr1	5533256	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B10,B65,B71
typical_cds_rare	Chr1	5533256	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	3	B10,B65,B71
typical_cds_rare	Chr1	5533266	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008189	SmilChr01G000282	131008189	rna-XM_057935101.1	2	C23,C26