source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	8561675	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	3	A10,B75,C71
lof_cds	Chr1	8561734	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B12,B55
typical_cds_rare	Chr1	8561734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B12,B55
typical_cds_rare	Chr1	8561740	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	B11,C27,C72,D2,D5
typical_cds_rare	Chr1	8561774	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B122,B2
typical_cds_rare	Chr1	8561783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	B11,C27,C72,D2,D5
lof_cds	Chr1	8561832	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	49	A19,A2,A5,A6,B101,B11,B112,B113,B12,B121,B123,B124,B125,B129,B136,B14,B16,B25,B35,B5,B51,B62,B73,B8,B93,B94,B98,B99,C11,C13,C21,C25,C26,C29,C3,C30,C36,C40,C42,C43,C48,C5,C52,C56,C58,C69,C74,C87,C9
lof_cds	Chr1	8561833	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B32,C16,C62,D3
typical_cds_rare	Chr1	8561833	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B32,C16,C62,D3
typical_cds_rare	Chr1	8561847	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	C61
typical_cds_rare	Chr1	8561898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	3	B58,C61,D9
lof_cds	Chr1	8561929	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B106,C11,C35,C54
typical_cds_rare	Chr1	8561929	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B106,C11,C35,C54
lof_cds	Chr1	8561943	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B1
typical_cds_rare	Chr1	8561943	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B1
typical_cds_rare	Chr1	8561961	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	A13,A20,B67,B84,C22
typical_cds_rare	Chr1	8561982	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B67,B84
lof_cds	Chr1	8562022	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	40	A11,A15,A18,B106,B111,B117,B126,B130,B134,B2,B22,B23,B33,B41,B54,B58,B65,B76,B86,B91,B95,C11,C18,C2,C20,C21,C35,C39,C4,C45,C51,C54,C58,C61,C79,C80,C83,D11,D8,D9
lof_cds	Chr1	8562031	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	6	B136,B41,B94,B98,C17,C24
typical_cds_rare	Chr1	8562051	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B104
lof_cds	Chr1	8562056	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B114
typical_cds_rare	Chr1	8562056	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B114
lof_cds	Chr1	8562116	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	3	B25,C26,C80
typical_cds_rare	Chr1	8562116	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	3	B25,C26,C80
typical_cds_rare	Chr1	8562118	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	B118,B140,B44,B60,C82
typical_cds_rare	Chr1	8562137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B137,B24,C43,C59
lof_cds	Chr1	8562237	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B14,B97
typical_cds_rare	Chr1	8562237	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B14,B97
typical_cds_rare	Chr1	8562274	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	B118,B140,B44,B60,C82
lof_cds	Chr1	8562311	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B90,B92,C19,D11
typical_cds_rare	Chr1	8562311	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B90,B92,C19,D11
typical_cds_rare	Chr1	8562359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	B118,B140,B44,B60,C82
typical_cds_rare	Chr1	8562386	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	3	B129,B89,C26
typical_cds_rare	Chr1	8562389	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B90,B92
lof_cds	Chr1	8562392	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	73	A18,A20,A4,B101,B102,B111,B117,B121,B123,B125,B127,B128,B129,B130,B131,B140,B15,B16,B17,B18,B20,B21,B23,B26,B27,B28,B3,B4,B44,B48,B59,B6,B61,B63,B65,B67,B69,B7,B71,B72,B73,B77,B8,B81,B88,B90,B92,B98,C1,C13,C16,C20,C21,C29,C38,C44,C46,C48,C5,C50,C7,C70,C73,C75,C78,C81,C83,C85,D1,D10,D4,D5,D6
lof_cds	Chr1	8562401	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B90,B92
typical_cds_rare	Chr1	8562401	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B90,B92
typical_cds_rare	Chr1	8562421	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	C6
lof_cds	Chr1	8562455	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B115,B16,B24,C6
typical_cds_rare	Chr1	8562455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B115,B16,B24,C6
typical_cds_rare	Chr1	8562487	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	B9,C11,C45,C7,C77
typical_cds_rare	Chr1	8562508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B36,C12,C54,C85
lof_cds	Chr1	8562534	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	12	A1,A11,A20,B103,B113,B26,B84,C54,C63,C77,D4,D7
typical_cds_rare	Chr1	8562554	AAC	*	INDEL	2bp_deletion	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	C39
lof_cds	Chr1	8562560	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	A16,A7,B34,B90,C8
typical_cds_rare	Chr1	8562560	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	A16,A7,B34,B90,C8
typical_cds_rare	Chr1	8562569	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B126
lof_cds	Chr1	8562713	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	10	B105,B135,B137,B138,B34,B61,B78,B86,B91,B99
typical_cds_rare	Chr1	8562762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	C49
typical_cds_rare	Chr1	8562774	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B131,B52
typical_cds_rare	Chr1	8562847	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B22,C44,C56,C67
typical_cds_rare	Chr1	8562849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	B10,B26
typical_cds_rare	Chr1	8562851	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	D11
lof_cds	Chr1	8562853	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	10	B122,B32,B68,B75,B89,C32,C36,C43,C59,C71
lof_cds	Chr1	8562882	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	C54,C74
typical_cds_rare	Chr1	8562882	T	TAC	INDEL	2bp_insertion	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	C54,C74
lof_cds	Chr1	8562896	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B104
typical_cds_rare	Chr1	8562896	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	B104
typical_cds_rare	Chr1	8562949	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	4	B57,B93,C49,C53
lof_cds	Chr1	8563094	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	8	B11,B133,B70,B9,C1,C3,C39,C71
typical_cds_rare	Chr1	8563096	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	C65
typical_cds_rare	Chr1	8563099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	5	B99,C16,C20,C83,C9
typical_cds_rare	Chr1	8563106	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	2	C26,C80
typical_cds_rare	Chr1	8563118	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014673	SmilChr01G000427	131014673	rna-XM_057942748.1	1	C65