source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	8589141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B66
typical_cds_rare	Chr1	8589148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	C3
typical_cds_rare	Chr1	8589155	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	B138,B55
typical_cds_rare	Chr1	8589156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	C3
typical_cds_rare	Chr1	8589157	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	A16
typical_cds_rare	Chr1	8589188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B98,C3,C48,C52
lof_cds	Chr1	8589190	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B98,C3,C48,C52
typical_cds_rare	Chr1	8589190	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B98,C3,C48,C52
lof_cds	Chr1	8589195	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B98,C3,C48,C52
typical_cds_rare	Chr1	8589195	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B98,C3,C48,C52
typical_cds_rare	Chr1	8589199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	B15,D1
typical_cds_rare	Chr1	8589203	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B55,B98,C3
typical_cds_rare	Chr1	8589204	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	5	B55,B98,C3,C48,C52
typical_cds_rare	Chr1	8589206	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B55,B98,C3,C52
typical_cds_rare	Chr1	8589212	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B55,B98,C3,C52
typical_cds_rare	Chr1	8589223	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B55,B98,C3,C52
typical_cds_rare	Chr1	8589226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B55,B98,C3,C52
typical_cds_rare	Chr1	8589248	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	A24
lof_cds	Chr1	8589271	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	6	A13,B137,B98,C21,C3,C52
typical_cds_rare	Chr1	8589293	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	C19
lof_cds	Chr1	8589305	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B102,B21,C34
typical_cds_rare	Chr1	8589305	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B102,B21,C34
typical_cds_rare	Chr1	8589346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B78
typical_cds_rare	Chr1	8589358	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	5	B106,B73,B97,C59,C84
typical_cds_rare	Chr1	8589363	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	A10,B57
typical_cds_rare	Chr1	8589365	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	B15,D1
typical_cds_rare	Chr1	8589397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	C33
lof_cds	Chr1	8589448	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	51	A21,A23,A3,B101,B102,B103,B106,B108,B112,B113,B119,B123,B140,B22,B26,B3,B31,B38,B39,B4,B41,B42,B43,B49,B51,B53,B58,B59,B62,B7,B72,B74,B76,B83,B95,C19,C23,C24,C28,C35,C36,C38,C46,C59,C63,C67,C77,C79,D11,D3,D7
typical_cds_rare	Chr1	8589451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	C46,C48,C71,C73
lof_cds	Chr1	8589611	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	7	B16,B4,B78,B8,B89,C19,C36
typical_cds_rare	Chr1	8589625	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	A19,B51,B66
typical_cds_rare	Chr1	8589634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	C57
typical_cds_rare	Chr1	8589656	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	C11,C69,D9
typical_cds_rare	Chr1	8589662	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B8
lof_cds	Chr1	8589665	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	74	A10,A15,A22,A3,A5,A7,A9,B1,B105,B107,B109,B11,B111,B113,B12,B125,B132,B135,B136,B137,B139,B14,B15,B23,B27,B33,B38,B39,B5,B56,B57,B65,B66,B67,B74,B77,B82,B84,B87,B89,B91,B96,C14,C18,C2,C21,C28,C29,C32,C33,C39,C4,C40,C45,C46,C5,C52,C54,C55,C56,C58,C61,C62,C68,C7,C71,C74,C75,C78,C8,C80,C84,C9,D1
typical_cds_rare	Chr1	8589691	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B46,B53,B78
typical_cds_rare	Chr1	8589692	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B126,C16,C33,C46
typical_cds_rare	Chr1	8589749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	A5,B138,B55
lof_cds	Chr1	8589824	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	C19,D11
typical_cds_rare	Chr1	8589824	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	C19,D11
typical_cds_rare	Chr1	8589835	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B17,B9,D5
typical_cds_rare	Chr1	8589895	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	B130,B9
lof_cds	Chr1	8589905	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	22	B10,B101,B111,B112,B19,B23,B4,B47,B56,B71,B98,B99,C12,C14,C25,C48,C5,C56,C84,C87,D10,D7
lof_cds	Chr1	8589917	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	36	A6,B104,B105,B117,B118,B125,B126,B139,B140,B17,B18,B19,B25,B3,B45,B5,B55,B61,B74,B82,B84,B95,B98,C20,C41,C44,C45,C49,C59,C75,C77,C79,C81,D4,D5,D7
typical_cds_rare	Chr1	8589938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	B138,B55
typical_cds_rare	Chr1	8589945	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B66
lof_cds	Chr1	8589978	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B91
typical_cds_rare	Chr1	8589978	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B91
typical_cds_rare	Chr1	8590004	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B66
typical_cds_rare	Chr1	8590086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	A3,B114,C61,C62
typical_cds_rare	Chr1	8590092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B10,B38,C15
typical_cds_rare	Chr1	8590108	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B66
typical_cds_rare	Chr1	8590114	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B40
typical_cds_rare	Chr1	8590132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	C83
typical_cds_rare	Chr1	8590172	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	C11,C69,D9
typical_cds_rare	Chr1	8590196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B110,B16,B31,B33
typical_cds_rare	Chr1	8590201	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	2	B138,C15
typical_cds_rare	Chr1	8590234	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B126,C33,C46
typical_cds_rare	Chr1	8590270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	4	B114,B18,B24,B33
lof_cds	Chr1	8590282	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	C11,C69,D9
typical_cds_rare	Chr1	8590282	TAC	T	INDEL	2bp_deletion	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	C11,C69,D9
typical_cds_rare	Chr1	8590315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	3	B104,B2,B31
typical_cds_rare	Chr1	8590335	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	1	B66
lof_cds	Chr1	8590393	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	55	A18,A19,A25,A8,A9,B1,B100,B109,B114,B12,B121,B124,B133,B134,B16,B17,B26,B30,B32,B37,B58,B59,B66,B69,B70,B73,B74,B75,B76,B78,B91,B92,B96,C1,C17,C18,C25,C26,C27,C33,C43,C49,C51,C56,C57,C58,C60,C64,C71,C72,C74,C76,C79,C81,D1
lof_cds	Chr1	8590418	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131014899	SmilChr01G000429	131014899	rna-XM_057943090.1	117	A1,A10,A13,A16,A18,A23,A25,A7,A8,A9,B10,B100,B104,B109,B11,B110,B114,B115,B117,B118,B12,B121,B124,B125,B128,B129,B130,B133,B134,B135,B139,B14,B140,B16,B17,B19,B20,B26,B28,B3,B30,B32,B36,B37,B40,B41,B43,B44,B45,B46,B47,B48,B56,B57,B58,B59,B60,B61,B65,B66,B69,B70,B71,B73,B75,B77,B78,B84,B88,B9,B91,B92,B94,B96,C12,C13,C16,C17,C20,C22,C23,C25,C26,C28,C3,C32,C33,C37,C38,C39,C41,C42,C49,C5,C51,C54,C56,C57,C58,C60,C61,C63,C64,C66,C71,C72,C74,C76,C77,C78,C80,C81,C84,D10,D4,D5,D9