source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	9580597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	A11
lof_cds	Chr1	9580629	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	4	B138,B24,B68,C85
typical_cds_rare	Chr1	9580629	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	4	B138,B24,B68,C85
typical_cds_rare	Chr1	9580635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	A10,B71,B75,C49,C71
typical_cds_rare	Chr1	9580639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B130
lof_cds	Chr1	9580644	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	11	A11,B19,B36,B57,B64,B86,C46,C62,C66,C69,C75
typical_cds_rare	Chr1	9580651	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B131
typical_cds_rare	Chr1	9580665	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	B59,B98,C19,C56,C59
typical_cds_rare	Chr1	9580680	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	A18,B63
typical_cds_rare	Chr1	9580699	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	B105,B117,B17,B2,C60
typical_cds_rare	Chr1	9580704	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	B26,C15,C29,D10,D5
typical_cds_rare	Chr1	9580711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	D10
typical_cds_rare	Chr1	9580728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	A20,B138
typical_cds_rare	Chr1	9580731	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	A10,B71,B75,C49,C71
typical_cds_rare	Chr1	9580749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B130,B60
typical_cds_rare	Chr1	9580770	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B71,C49
typical_cds_rare	Chr1	9580784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B105,B17
typical_cds_rare	Chr1	9580786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	A10,B71,B75,C49,C71
typical_cds_rare	Chr1	9580815	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	C14
typical_cds_rare	Chr1	9580828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	C19
lof_cds	Chr1	9580833	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	23	A6,A7,B1,B105,B106,B123,B133,B59,B60,B74,B83,B86,B87,C13,C14,C29,C46,C55,C56,C59,C8,C83,C9
lof_cds	Chr1	9580944	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	95	A10,A13,A15,A19,A22,A24,A25,A3,A6,B1,B102,B103,B104,B105,B107,B11,B110,B111,B117,B118,B12,B121,B132,B135,B137,B139,B14,B22,B23,B25,B26,B27,B28,B33,B34,B35,B38,B39,B46,B47,B5,B52,B53,B54,B55,B58,B61,B63,B65,B66,B67,B68,B70,B80,B82,B83,B84,B89,B93,B95,C13,C16,C18,C2,C21,C3,C30,C34,C35,C39,C4,C40,C42,C45,C48,C5,C50,C53,C55,C58,C59,C61,C62,C70,C75,C77,C78,C79,C8,C80,C83,C84,C85,D10,D8
typical_cds_rare	Chr1	9580946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B19,B27
typical_cds_rare	Chr1	9580962	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B71,C49
typical_cds_rare	Chr1	9580976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B94,C39,C87
typical_cds_rare	Chr1	9581022	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B37,B68,B71
typical_cds_rare	Chr1	9581048	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	A8,B19,B27,C56,C60
lof_cds	Chr1	9581061	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	A14,B93
typical_cds_rare	Chr1	9581061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	A14,B93
typical_cds_rare	Chr1	9581076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B94
typical_cds_rare	Chr1	9581097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B37,B68
lof_cds	Chr1	9581113	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B126,D2,D7
typical_cds_rare	Chr1	9581113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B126,D2,D7
typical_cds_rare	Chr1	9581126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B44
typical_cds_rare	Chr1	9581151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B114
lof_cds	Chr1	9581174	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	A10,B75,C71
typical_cds_rare	Chr1	9581174	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	A10,B75,C71
lof_cds	Chr1	9581181	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	10	A11,B104,B11,B131,B54,C1,C27,C37,C41,D11
typical_cds_rare	Chr1	9581227	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	C16,D10
typical_cds_rare	Chr1	9581252	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B71,C49
lof_cds	Chr1	9581271	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	58	A4,A9,B102,B105,B106,B107,B11,B111,B123,B129,B131,B133,B135,B136,B137,B15,B21,B36,B52,B57,B58,B6,B65,B80,B81,B84,B85,B87,B88,B89,B94,B99,C20,C30,C32,C35,C4,C40,C42,C49,C50,C51,C55,C58,C67,C68,C69,C71,C72,C76,C77,C84,C85,C87,D11,D3,D4,D5
typical_cds_rare	Chr1	9581295	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B7,C59,C79
typical_cds_rare	Chr1	9581309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B103,B107,B25
typical_cds_rare	Chr1	9581317	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B129,D10
lof_cds	Chr1	9581322	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	102	A10,A13,A15,A18,A19,A21,A22,A24,A25,A3,A5,A6,A9,B1,B100,B102,B103,B104,B105,B107,B11,B110,B111,B113,B117,B118,B12,B121,B133,B135,B137,B139,B14,B22,B23,B25,B26,B27,B28,B33,B35,B38,B39,B46,B47,B5,B50,B52,B53,B54,B55,B58,B61,B63,B65,B66,B67,B68,B7,B70,B77,B80,B82,B83,B84,B89,B93,B95,C13,C16,C18,C2,C21,C3,C30,C34,C35,C39,C40,C42,C45,C48,C5,C50,C53,C55,C58,C59,C61,C62,C70,C75,C77,C78,C79,C8,C80,C83,C84,C85,D10,D8
typical_cds_rare	Chr1	9581338	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B130
typical_cds_rare	Chr1	9581351	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	4	B10,B26,B91,C27
lof_cds	Chr1	9581364	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B140,B90,B92
typical_cds_rare	Chr1	9581364	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B140,B90,B92
typical_cds_rare	Chr1	9581376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	A10,B75,C71
lof_cds	Chr1	9581391	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	12	B112,B113,B123,B41,B42,B49,B62,B72,C15,C38,C63,C67
typical_cds_rare	Chr1	9581455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B130
typical_cds_rare	Chr1	9581463	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B129
typical_cds_rare	Chr1	9581502	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	A10
typical_cds_rare	Chr1	9581523	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B71,C49
typical_cds_rare	Chr1	9581547	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	C79,D10
typical_cds_rare	Chr1	9581570	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B124,B129,B94
typical_cds_rare	Chr1	9581585	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B131
typical_cds_rare	Chr1	9581604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B108,B137,C61
typical_cds_rare	Chr1	9581609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B131
typical_cds_rare	Chr1	9581618	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	4	C11,C42,C69,D10
typical_cds_rare	Chr1	9581626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	A10,B75,C71
typical_cds_rare	Chr1	9581630	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	D10
typical_cds_rare	Chr1	9581636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	D10
lof_cds	Chr1	9581651	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	92	A10,A13,A15,A18,A19,A21,A22,A24,A5,A6,A9,B1,B100,B102,B103,B104,B105,B107,B11,B110,B111,B113,B117,B12,B121,B132,B133,B135,B137,B139,B14,B23,B25,B27,B33,B34,B35,B38,B39,B46,B47,B50,B53,B54,B55,B58,B63,B65,B66,B67,B68,B70,B77,B80,B82,B83,B84,B89,B93,B95,C13,C16,C18,C2,C21,C3,C30,C35,C39,C4,C40,C42,C45,C5,C50,C53,C58,C59,C61,C62,C70,C75,C77,C78,C79,C8,C80,C83,C84,C85,D10,D8
typical_cds_rare	Chr1	9581656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	A10,B75,C71
typical_cds_rare	Chr1	9581879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	C32,C68
typical_cds_rare	Chr1	9581882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	C25
typical_cds_rare	Chr1	9582013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	C24
typical_cds_rare	Chr1	9582018	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	C24
lof_cds	Chr1	9582040	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B90,C17,C24
typical_cds_rare	Chr1	9582040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	3	B90,C17,C24
typical_cds_rare	Chr1	9582045	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	B130
typical_cds_rare	Chr1	9582049	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	1	C25
typical_cds_rare	Chr1	9582052	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B90,C24
typical_cds_rare	Chr1	9582064	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	5	A8,B19,B27,C56,C60
lof_cds	Chr1	9582090	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B112,C43
typical_cds_rare	Chr1	9582090	GTC	G	INDEL	2bp_deletion	CDS_variant	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	2	B112,C43
lof_cds	Chr1	9582105	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016677	SmilChr01G000467	131016677	rna-XM_057945416.1	62	A1,A14,A3,A8,B100,B104,B113,B114,B124,B128,B129,B131,B135,B136,B15,B16,B17,B19,B2,B27,B37,B40,B47,B50,B53,B54,B55,B64,B65,B69,B70,B75,B76,B87,B90,B93,B95,C18,C2,C22,C25,C3,C32,C33,C35,C4,C40,C5,C50,C62,C64,C66,C70,C73,C74,C75,C80,C82,C86,C87,D10,D3