source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	9959430	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	C14
lof_cds	Chr1	9959431	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	49	A18,A3,A7,B103,B107,B12,B128,B13,B132,B135,B136,B140,B2,B24,B25,B27,B37,B38,B39,B40,B51,B55,B73,B76,B77,B78,B98,B99,C1,C15,C18,C19,C2,C30,C31,C37,C4,C44,C53,C55,C57,C6,C61,C62,C75,C8,D11,D4,D9
typical_cds_rare	Chr1	9959476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B112,B26,C8
lof_cds	Chr1	9959481	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	30	A15,A2,B105,B11,B112,B12,B16,B27,B47,B50,B59,B64,B68,B69,B78,C10,C2,C35,C39,C50,C53,C56,C60,C62,C63,C65,C67,C81,C82,C85
lof_cds	Chr1	9959488	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	10	A16,A22,A8,B112,B131,B31,B57,B77,B90,D3
typical_cds_rare	Chr1	9959516	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	B54,B92,C1,D11
lof_cds	Chr1	9959538	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	39	A13,A9,B111,B121,B122,B123,B129,B137,B139,B18,B28,B31,B37,B5,B54,B59,B6,B60,B63,B65,B72,B85,B88,B89,C20,C27,C31,C33,C41,C46,C49,C5,C50,C56,C67,C75,C84,C9,D8
typical_cds_rare	Chr1	9959549	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	B7,C35
typical_cds_rare	Chr1	9959570	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	C79,D11
lof_cds	Chr1	9959577	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	10	A24,B12,B127,B2,B55,B85,C20,C38,C71,C83
typical_cds_rare	Chr1	9959580	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	5	B131,B24,C28,C62,D10
typical_cds_rare	Chr1	9959598	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	A22,C79,D11
typical_cds_rare	Chr1	9959616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	A5,C12,C31
typical_cds_rare	Chr1	9959642	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	B73,C55,C71,D3
typical_cds_rare	Chr1	9959653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	A20,B52,B57
lof_cds	Chr1	9959677	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	C82,C9
typical_cds_rare	Chr1	9959677	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	C82,C9
typical_cds_rare	Chr1	9959691	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	B134,C26
typical_cds_rare	Chr1	9959715	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	A24,C40,D3
typical_cds_rare	Chr1	9959743	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	C44,C5
typical_cds_rare	Chr1	9959914	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	C37
typical_cds_rare	Chr1	9959992	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	5	B132,B18,B42,B43,B55
typical_cds_rare	Chr1	9960001	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	5	B132,B18,B42,B43,B55
typical_cds_rare	Chr1	9960020	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	B114,B44,C51,C74
typical_cds_rare	Chr1	9960021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B73
lof_cds	Chr1	9960104	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	33	B107,B113,B128,B137,B138,B18,B37,B52,B53,B57,B6,B66,B7,B73,B77,B85,B91,B98,C19,C25,C26,C37,C53,C54,C62,C64,C67,C7,C80,C84,D11,D4,D5
typical_cds_rare	Chr1	9960119	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B2
typical_cds_rare	Chr1	9960130	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B57,C6,C7
typical_cds_rare	Chr1	9960183	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	A7,C69
typical_cds_rare	Chr1	9960202	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	C27,C46,C52
typical_cds_rare	Chr1	9960216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B57
typical_cds_rare	Chr1	9960249	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	B131,B90
typical_cds_rare	Chr1	9960300	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	B132,B18,B42,B55
lof_cds	Chr1	9960321	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	7	A5,B127,B18,B39,C54,C83,D3
typical_cds_rare	Chr1	9960339	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	B137,B88
typical_cds_rare	Chr1	9960352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B137,B88,C65
typical_cds_rare	Chr1	9960354	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	A16
typical_cds_rare	Chr1	9960355	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	A16,B112
typical_cds_rare	Chr1	9960402	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	C15,C52
typical_cds_rare	Chr1	9960413	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	B100,C55
typical_cds_rare	Chr1	9960415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	B18,B42,B55,D11
typical_cds_rare	Chr1	9960481	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	C2
typical_cds_rare	Chr1	9960492	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	D11
typical_cds_rare	Chr1	9960522	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B21,C27,C5
typical_cds_rare	Chr1	9960595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	C52
typical_cds_rare	Chr1	9960601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B132,B18,B43
typical_cds_rare	Chr1	9960604	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	B26,B47,B57,B92
typical_cds_rare	Chr1	9960663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B20
typical_cds_rare	Chr1	9960765	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	A22,B2,B24,C12
typical_cds_rare	Chr1	9960793	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B69
lof_cds	Chr1	9960885	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	8	A7,B112,B3,B31,B50,B65,B67,C6
typical_cds_rare	Chr1	9960894	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B104,C48,D3
lof_cds	Chr1	9960898	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B104,C48,D3
typical_cds_rare	Chr1	9960898	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B104,C48,D3
typical_cds_rare	Chr1	9960918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B129
typical_cds_rare	Chr1	9960919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B125,B16,C21
typical_cds_rare	Chr1	9960953	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B132,B18,B42
typical_cds_rare	Chr1	9960981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	D3
typical_cds_rare	Chr1	9960998	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	C35
typical_cds_rare	Chr1	9961027	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	C31,C37
typical_cds_rare	Chr1	9961056	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B104
typical_cds_rare	Chr1	9961191	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B132,B18,B42
typical_cds_rare	Chr1	9961397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	5	B20,B54,B74,C1,D11
typical_cds_rare	Chr1	9961669	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	C26,C87
typical_cds_rare	Chr1	9961673	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	C37
typical_cds_rare	Chr1	9961789	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	B27
typical_cds_rare	Chr1	9961812	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	2	A14,B129
typical_cds_rare	Chr1	9961820	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	4	B114,B44,C51,C74
typical_cds_rare	Chr1	9961828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	3	B27,C50,C62
typical_cds_rare	Chr1	9961843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	1	A14
typical_cds_rare	Chr1	9961955	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017520	SmilChr01G000490	131017520	rna-XM_057946331.1	5	B34,B44,B77,C51,C74