source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	11991949	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	B110,C16,D4
typical_cds_rare	Chr1	11991950	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	A20,A9,C21,C36
typical_cds_rare	Chr1	11991957	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	A20,B41,C21,C36,D10
typical_cds_rare	Chr1	11991964	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	1	C81
typical_cds_rare	Chr1	11991975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B14,B47,B63,B65,B67
typical_cds_rare	Chr1	11991980	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	A21,B110,B75,D4
typical_cds_rare	Chr1	11992004	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	C13,C41
typical_cds_rare	Chr1	11992027	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	B127,B79
lof_cds	Chr1	11992029	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	43	A10,A23,A7,B10,B109,B117,B123,B21,B23,B27,B4,B41,B46,B59,B6,B62,B69,B70,B85,B86,B9,B91,B95,C13,C14,C17,C20,C21,C40,C42,C44,C5,C52,C57,C6,C63,C67,C75,C76,C8,C86,D3,D7
lof_cds	Chr1	11992030	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B106,B47,B93,C60,C61
typical_cds_rare	Chr1	11992030	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B106,B47,B93,C60,C61
typical_cds_rare	Chr1	11992047	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	1	B50
typical_cds_rare	Chr1	11992050	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	1	B77
typical_cds_rare	Chr1	11992051	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B127,B33,B49,B55,B69
typical_cds_rare	Chr1	11992060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	B43,B86,C68
lof_cds	Chr1	11992068	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	8	B128,B18,B85,C15,C31,C61,C75,D9
lof_cds	Chr1	11992076	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	A9,B75,D4
typical_cds_rare	Chr1	11992076	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	A9,B75,D4
typical_cds_rare	Chr1	11992084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	B98,C31,D5
typical_cds_rare	Chr1	11992092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	B12,B54,C85
typical_cds_rare	Chr1	11992103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B111,B139,B4,B92,B98
typical_cds_rare	Chr1	11992114	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	B21,B93,C23,C26
typical_cds_rare	Chr1	11992126	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	B136,C22,C5,C77
typical_cds_rare	Chr1	11992134	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	C22,C39,C5,C53,C77
typical_cds_rare	Chr1	11992150	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	C27,C75,C8
typical_cds_rare	Chr1	11992155	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	1	B51
typical_cds_rare	Chr1	11992174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	B123,B81,C8,D7
typical_cds_rare	Chr1	11992178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B139,B84,C73,C80,C83
lof_cds	Chr1	11992193	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	58	A1,A18,A22,A23,B10,B100,B102,B110,B113,B121,B125,B132,B134,B16,B18,B19,B22,B25,B30,B36,B42,B43,B45,B48,B51,B52,B54,B55,B70,B73,B75,B79,B85,B87,B9,C15,C28,C32,C33,C34,C46,C49,C52,C56,C6,C7,C72,C75,C77,C79,C81,C84,C85,D10,D5,D6,D8,D9
lof_cds	Chr1	11992196	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	C28,C65
typical_cds_rare	Chr1	11992196	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	C28,C65
typical_cds_rare	Chr1	11992204	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	A3,B21,B48,B75,C35
typical_cds_rare	Chr1	11992207	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	B61,C23,C26
lof_cds	Chr1	11992214	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	10	A2,B140,B16,B20,B40,B69,B70,C11,C66,C80
typical_cds_rare	Chr1	11992222	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	B111,C8
lof_cds	Chr1	11992236	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B110,B131,B70,B82,C78
typical_cds_rare	Chr1	11992236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B110,B131,B70,B82,C78
typical_cds_rare	Chr1	11992240	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	B98,C19,C39,C81
typical_cds_rare	Chr1	11992245	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	1	B21
typical_cds_rare	Chr1	11992258	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	C78,C8
lof_cds	Chr1	11992262	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	26	A1,B100,B108,B11,B110,B117,B124,B127,B139,B16,B25,B36,B41,B44,B73,B85,C27,C31,C44,C60,C64,C65,C70,C75,C81,D4
typical_cds_rare	Chr1	11992267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	1	B68
typical_cds_rare	Chr1	11992306	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	A9,B85,B97,B98
typical_cds_rare	Chr1	11992310	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	A16,B137,C25,C63
typical_cds_rare	Chr1	11992312	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	B37,B98,C41
typical_cds_rare	Chr1	11992321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	B100,B22,B27,B84
lof_cds	Chr1	11992336	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	B85,C15
typical_cds_rare	Chr1	11992336	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	B85,C15
typical_cds_rare	Chr1	11992350	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	5	B100,B111,C29,C49,C5
typical_cds_rare	Chr1	11992358	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	3	B33,B67,C65
typical_cds_rare	Chr1	11992369	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	C53,C75
typical_cds_rare	Chr1	11992382	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	C33,D2
typical_cds_rare	Chr1	11992392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	B19,B74,B77,C71
typical_cds_rare	Chr1	11992393	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	4	C2,C69,C75,D7
typical_cds_rare	Chr1	11992404	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131020837	SmilChr01G000577	131020837	rna-XM_057949913.1	2	C72,D1