source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	12152237	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	B1
typical_cds_rare	Chr1	12152283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B45,B96
lof_cds	Chr1	12152292	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	9	A13,B122,B13,B29,B90,B95,C5,D2,D5
lof_cds	Chr1	12152299	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	6	B105,B110,B13,B132,B45,B84
typical_cds_rare	Chr1	12152301	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	A4,B140,C14,C87
lof_cds	Chr1	12152307	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	B33,B89,C23
typical_cds_rare	Chr1	12152307	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	B33,B89,C23
typical_cds_rare	Chr1	12152308	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	A4,B140,C14,C78
lof_cds	Chr1	12152326	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	B19
typical_cds_rare	Chr1	12152326	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	B19
typical_cds_rare	Chr1	12152357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	C78
typical_cds_rare	Chr1	12152358	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B14,B46,B65,B66
typical_cds_rare	Chr1	12152376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	C46
typical_cds_rare	Chr1	12152377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	5	B20,B25,B30,B4,C2
typical_cds_rare	Chr1	12152429	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	C59
typical_cds_rare	Chr1	12152438	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	B23,B46,C41
typical_cds_rare	Chr1	12152442	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	B46
typical_cds_rare	Chr1	12152452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B134,B22,B5,C76
typical_cds_rare	Chr1	12152474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B56,C45
lof_cds	Chr1	12152485	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	C31,C33,D3
typical_cds_rare	Chr1	12152485	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	C31,C33,D3
typical_cds_rare	Chr1	12152499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B9,C2
typical_cds_rare	Chr1	12152517	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B119,B56
typical_cds_rare	Chr1	12152518	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	B13
typical_cds_rare	Chr1	12152570	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	B102,C23,D6
lof_cds	Chr1	12152614	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	24	A1,A19,A20,B100,B103,B110,B113,B121,B13,B132,B15,B42,B43,B51,B60,B8,B86,C2,C3,C32,C48,C68,C7,D6
typical_cds_rare	Chr1	12152624	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B119,C18
lof_cds	Chr1	12152625	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	15	A10,A20,B105,B133,B134,B40,B53,B61,B64,B84,C18,C6,C61,C72,C83
typical_cds_rare	Chr1	12152697	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	D5
typical_cds_rare	Chr1	12152703	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	1	A5
lof_cds	Chr1	12152728	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	A15,B34,D8
typical_cds_rare	Chr1	12152728	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	A15,B34,D8
typical_cds_rare	Chr1	12152738	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	5	B110,B118,B135,B84,D4
typical_cds_rare	Chr1	12152743	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	A15,B34,D8
typical_cds_rare	Chr1	12152778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	A4,B66,D10,D7
typical_cds_rare	Chr1	12152817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B111,B21,C53,C56
typical_cds_rare	Chr1	12152850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B14,B47,C21,C84
lof_cds	Chr1	12152859	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	9	B104,B21,B45,B55,B92,B93,C39,C87,D4
typical_cds_rare	Chr1	12152875	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	B101,B102,B88
lof_cds	Chr1	12152877	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	A13,B115,C20,D9
typical_cds_rare	Chr1	12152877	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	A13,B115,C20,D9
lof_cds	Chr1	12152897	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B56,C33
typical_cds_rare	Chr1	12152897	CGA	C	INDEL	2bp_deletion	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B56,C33
typical_cds_rare	Chr1	12152906	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B22,C16,C36,D7
typical_cds_rare	Chr1	12152920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B62,C20
lof_cds	Chr1	12152973	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B25,B58
typical_cds_rare	Chr1	12152973	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	B25,B58
lof_cds	Chr1	12152988	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B100,B114,B67,C58
typical_cds_rare	Chr1	12152988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B100,B114,B67,C58
typical_cds_rare	Chr1	12153005	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	C5,C61,C78
lof_cds	Chr1	12153011	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	C24,C63,D1
typical_cds_rare	Chr1	12153011	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	C24,C63,D1
lof_cds	Chr1	12153012	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	C24,C63,D1
typical_cds_rare	Chr1	12153012	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	3	C24,C63,D1
typical_cds_rare	Chr1	12153063	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	5	B36,B78,C66,C67,D6
typical_cds_rare	Chr1	12153094	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	4	B1,B125,B59,C2
lof_cds	Chr1	12153165	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	23	A13,A23,B104,B128,B137,B139,B21,B24,B30,B54,B64,B79,C30,C31,C42,C5,C50,C55,C58,C75,D3,D8,D9
typical_cds_rare	Chr1	12153170	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006622	SmilChr01G000580	131006622	rna-XM_057933799.1	2	A15,C19
