source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	16117696	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B86,C75
typical_cds_rare	Chr1	16117723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	C28
typical_cds_rare	Chr1	16117735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	C37
typical_cds_rare	Chr1	16117741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	B82,C55,C8
typical_cds_rare	Chr1	16117752	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	C21,C32,C75
lof_cds	Chr1	16117759	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	114	A10,A13,A15,A20,A21,A22,A24,A3,A4,A5,A6,A7,A9,B1,B10,B100,B102,B107,B108,B11,B111,B113,B117,B118,B122,B124,B129,B13,B131,B132,B134,B135,B137,B138,B139,B14,B140,B16,B18,B19,B23,B27,B28,B30,B36,B4,B42,B43,B45,B46,B48,B5,B51,B52,B54,B55,B56,B59,B60,B61,B65,B67,B70,B73,B77,B78,B79,B82,B84,B87,B89,B9,B91,B93,B94,B96,C11,C12,C18,C2,C21,C23,C3,C34,C36,C38,C39,C4,C40,C45,C46,C49,C5,C50,C53,C55,C58,C60,C62,C69,C7,C72,C75,C77,C78,C79,C80,C81,C84,C85,D4,D5,D7,D8
typical_cds_rare	Chr1	16117784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B104,B75
typical_cds_rare	Chr1	16117786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	A15,B91
typical_cds_rare	Chr1	16117791	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	5	B131,B42,B43,C50,D10
typical_cds_rare	Chr1	16117822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	4	B11,C27,C41,C71
lof_cds	Chr1	16117839	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	43	A1,A11,A3,B1,B104,B109,B11,B114,B121,B124,B127,B128,B134,B139,B17,B19,B22,B36,B41,B44,B50,B53,B68,B85,B94,C10,C14,C23,C24,C29,C31,C41,C48,C6,C60,C62,C75,C79,C81,C82,C85,D3,D6
typical_cds_rare	Chr1	16117854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	A19,B76
typical_cds_rare	Chr1	16117860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	4	B42,B43,C50,D10
lof_cds	Chr1	16117866	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	10	A24,B1,B118,B2,B31,B41,B61,C22,C51,C8
lof_cds	Chr1	16117876	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	16	A22,B1,B106,B111,B118,B123,B135,B41,B7,B77,C18,C33,C39,C65,C80,C85
typical_cds_rare	Chr1	16117877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	4	A16,B85,B89,C60
lof_cds	Chr1	16117878	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	12	B11,B24,B68,B75,C27,C41,C64,C66,C71,C83,C85,D11
typical_cds_rare	Chr1	16117892	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	C37
typical_cds_rare	Chr1	16117899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	C11,C69
typical_cds_rare	Chr1	16117911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	B82,C55,C8
typical_cds_rare	Chr1	16117912	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B60
lof_cds	Chr1	16117957	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	42	A1,A11,A3,B1,B104,B109,B111,B114,B121,B124,B127,B128,B134,B139,B17,B19,B22,B36,B41,B44,B50,B68,B85,B91,B94,C10,C14,C24,C29,C3,C31,C41,C48,C6,C60,C75,C79,C81,C82,C85,D3,D8
lof_cds	Chr1	16117975	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	5	C11,C47,C51,C69,D4
typical_cds_rare	Chr1	16117975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	5	C11,C47,C51,C69,D4
typical_cds_rare	Chr1	16117981	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B104,B128
lof_cds	Chr1	16117985	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B42,C50
typical_cds_rare	Chr1	16117985	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B42,C50
lof_cds	Chr1	16117986	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	32	A11,A14,A18,A21,A24,A8,A9,B102,B107,B15,B22,B37,B38,B39,B53,B58,B60,B68,B7,B71,B83,B88,C13,C3,C42,C45,C48,C5,C59,C77,C79,C82
typical_cds_rare	Chr1	16117998	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B125,B90
typical_cds_rare	Chr1	16118008	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B64
typical_cds_rare	Chr1	16118025	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	C62,D6
typical_cds_rare	Chr1	16118046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	C41,C47,C48
typical_cds_rare	Chr1	16118067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	C28
typical_cds_rare	Chr1	16118099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	B11,B135,B64
typical_cds_rare	Chr1	16118141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	C37
typical_cds_rare	Chr1	16118158	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	B122,C12,C31
typical_cds_rare	Chr1	16118172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B55
typical_cds_rare	Chr1	16118176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B64
lof_cds	Chr1	16118195	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	16	B113,B123,B128,B26,B41,B42,B43,B49,B62,B72,B85,B90,C29,C38,C63,C67
typical_cds_rare	Chr1	16118243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B75
typical_cds_rare	Chr1	16118248	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	B122,B75,D11
typical_cds_rare	Chr1	16118250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B135,B64
typical_cds_rare	Chr1	16118294	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	3	B24,B68,C85
typical_cds_rare	Chr1	16118314	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B75
typical_cds_rare	Chr1	16118350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B128,B135
lof_cds	Chr1	16118374	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B135,B64
typical_cds_rare	Chr1	16118374	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B135,B64
lof_cds	Chr1	16118410	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	31	A11,A14,A18,A21,A24,A8,B102,B107,B15,B22,B37,B38,B39,B53,B58,B60,B68,B7,B71,B83,B88,C13,C3,C42,C45,C48,C5,C59,C77,C79,C82
typical_cds_rare	Chr1	16118431	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	4	B11,C27,C41,C71
lof_cds	Chr1	16118443	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	12	B11,B24,B68,B75,C27,C41,C64,C66,C71,C83,C85,D11
lof_cds	Chr1	16118446	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	D11
typical_cds_rare	Chr1	16118446	A	AC	INDEL	1bp_insertion	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	D11
typical_cds_rare	Chr1	16118450	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B23
typical_cds_rare	Chr1	16118481	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B135,C37
typical_cds_rare	Chr1	16118501	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	4	A24,B104,C3,C45
typical_cds_rare	Chr1	16118521	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	5	B133,B134,B70,C21,C63
lof_cds	Chr1	16118526	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	8	B1,B2,B3,B31,B41,B61,C51,C8
typical_cds_rare	Chr1	16118533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	D11
typical_cds_rare	Chr1	16118539	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B104,B128
typical_cds_rare	Chr1	16118586	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B134,B70
typical_cds_rare	Chr1	16118588	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B88
typical_cds_rare	Chr1	16118599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B125,C42
lof_cds	Chr1	16118613	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	89	A10,A15,A20,A21,A22,A24,A3,A5,A9,B1,B10,B102,B107,B108,B11,B111,B113,B117,B118,B122,B124,B129,B132,B135,B137,B139,B14,B16,B23,B27,B28,B30,B36,B4,B42,B43,B46,B48,B51,B52,B54,B55,B56,B59,B60,B61,B70,B73,B78,B79,B82,B87,B9,B93,B94,B96,C11,C18,C2,C21,C23,C3,C31,C34,C36,C38,C39,C40,C45,C46,C49,C5,C50,C53,C55,C58,C60,C62,C7,C72,C75,C77,C79,C80,C81,C84,C85,D4,D7
lof_cds	Chr1	16118616	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	44	A13,A15,A18,A22,A4,B100,B126,B13,B131,B17,B18,B24,B34,B41,B45,B5,B53,B61,B62,B65,B66,B67,B7,B77,B8,B80,B84,B89,B90,C1,C12,C13,C22,C28,C35,C4,C43,C64,C69,C74,C78,C81,C83,D5
typical_cds_rare	Chr1	16118622	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B16
typical_cds_rare	Chr1	16118638	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	1	B16
typical_cds_rare	Chr1	16118641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	2	B16,C37
lof_cds	Chr1	16118642	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130985815	SmilChr01G000720	130985815	rna-XM_057908994.1	70	A13,A15,A16,A18,A19,A22,A4,B100,B124,B125,B126,B13,B130,B131,B134,B138,B139,B140,B16,B17,B18,B2,B24,B34,B40,B41,B45,B5,B53,B6,B61,B62,B65,B66,B67,B7,B72,B77,B8,B80,B84,B89,B90,C1,C10,C12,C13,C18,C22,C28,C29,C35,C4,C42,C43,C45,C56,C59,C63,C64,C67,C69,C74,C76,C78,C83,C9,D5,D8,D9