source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	16669121	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	A16,B29,C16
typical_cds_rare	Chr1	16669128	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	2	B126,B33
typical_cds_rare	Chr1	16669130	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B12
typical_cds_rare	Chr1	16669131	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	2	B65,D6
lof_cds	Chr1	16669187	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	2	A21,C19
typical_cds_rare	Chr1	16669187	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	2	A21,C19
typical_cds_rare	Chr1	16669199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	2	B14,C16
typical_cds_rare	Chr1	16669212	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	B121,C35,C4
lof_cds	Chr1	16669338	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B44
typical_cds_rare	Chr1	16669338	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B44
lof_cds	Chr1	16669360	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	87	A16,A19,A20,A23,A24,A3,A4,A8,B1,B10,B102,B107,B111,B113,B114,B117,B12,B122,B126,B128,B129,B134,B135,B137,B18,B20,B22,B24,B36,B39,B42,B45,B46,B48,B54,B59,B60,B61,B62,B64,B65,B66,B67,B68,B75,B76,B77,B78,B8,B81,B88,B89,B98,B99,C11,C12,C16,C23,C24,C27,C28,C3,C31,C33,C34,C39,C40,C43,C44,C46,C47,C5,C51,C55,C60,C61,C71,C76,C79,C8,C80,C82,C87,D1,D11,D2,D4
typical_cds_rare	Chr1	16669371	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B131
typical_cds_rare	Chr1	16669379	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	A21,B131,C19
lof_cds	Chr1	16669393	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B36
typical_cds_rare	Chr1	16669393	C	CCG	INDEL	2bp_insertion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B36
typical_cds_rare	Chr1	16669457	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	A16,B29,C16
typical_cds_rare	Chr1	16669515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	5	A22,C34,C63,C67,D4
typical_cds_rare	Chr1	16669536	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	5	B53,B60,B83,C30,C60
typical_cds_rare	Chr1	16669576	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B15
typical_cds_rare	Chr1	16669595	CT	*	INDEL	1bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	2	A9,D8
typical_cds_rare	Chr1	16669621	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	D7
lof_cds	Chr1	16669669	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	59	A1,A10,A16,A18,A2,A22,A23,A3,A6,B100,B104,B105,B106,B122,B127,B140,B15,B16,B2,B24,B26,B34,B35,B37,B47,B54,B56,B71,B80,B85,B90,B92,B94,B95,B96,C13,C20,C21,C22,C23,C26,C29,C33,C40,C42,C47,C54,C58,C59,C60,C61,C65,C7,C77,C84,C85,C9,D2,D7
typical_cds_rare	Chr1	16669691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	A10
typical_cds_rare	Chr1	16669715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	C34,C63,D11
typical_cds_rare	Chr1	16669722	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B41
typical_cds_rare	Chr1	16669746	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	C16
lof_cds	Chr1	16669755	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	12	A18,B114,B128,B22,B25,B52,B69,B95,C41,C57,C70,D10
typical_cds_rare	Chr1	16669758	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	A20,B40,B83
lof_cds	Chr1	16669760	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	66	A10,A11,A20,A3,A8,B1,B107,B114,B117,B118,B121,B126,B128,B13,B130,B138,B16,B17,B20,B24,B25,B37,B39,B4,B42,B44,B46,B54,B55,B57,B61,B66,B67,B74,B75,B80,B88,B9,B96,B98,C1,C17,C19,C23,C24,C3,C31,C33,C35,C38,C40,C43,C46,C48,C55,C68,C71,C72,C74,C76,C8,C87,D10,D2,D3,D4
lof_cds	Chr1	16669821	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B99
typical_cds_rare	Chr1	16669821	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B99
typical_cds_rare	Chr1	16669851	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	B69,C5,D1
typical_cds_rare	Chr1	16669860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B15
lof_cds	Chr1	16669862	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	4	A6,B1,B61,D10
typical_cds_rare	Chr1	16669862	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	4	A6,B1,B61,D10
typical_cds_rare	Chr1	16669868	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B24
typical_cds_rare	Chr1	16669897	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	A6,B1,D10
typical_cds_rare	Chr1	16669898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	B104,B121,C4
typical_cds_rare	Chr1	16669919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	B69,C5,D1
typical_cds_rare	Chr1	16669931	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	A10
typical_cds_rare	Chr1	16669942	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	2	B53,B91
typical_cds_rare	Chr1	16669956	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	1	B99
lof_cds	Chr1	16670056	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	10	A24,B110,B132,B4,B40,B55,B76,B83,B91,C52
typical_cds_rare	Chr1	16670076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	4	B137,B42,B97,C82
typical_cds_rare	Chr1	16670083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1,rna-XM_057933905.1	3	B104,B121,C4
lof_cds	Chr1	16670260	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	2	B21,C50
typical_cds_rare	Chr1	16670260	CCA	C	INDEL	2bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	2	B21,C50
lof_cds	Chr1	16670262	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	10	B117,B119,B81,B92,C23,C62,C67,C80,C87,D1
typical_cds_rare	Chr1	16670269	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	4	A24,B100,B107,C17
typical_cds_rare	Chr1	16670328	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	1	D11
lof_cds	Chr1	16670329	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	2	B21,C50
typical_cds_rare	Chr1	16670329	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	2	B21,C50
lof_cds	Chr1	16670331	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	8	A19,B128,B139,B52,B63,B95,C70,D10
typical_cds_rare	Chr1	16670350	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	2	C32,C68
typical_cds_rare	Chr1	16670379	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933904.1	1	C23
typical_cds_rare	Chr1	16670734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	2	C32,C68
typical_cds_rare	Chr1	16670767	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	3	B85,C64,C66
lof_cds	Chr1	16670989	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1	4	A22,B28,B31,B7
typical_cds_rare	Chr1	16670989	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1	4	A22,B28,B31,B7
lof_cds	Chr1	16670994	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1	4	A22,B28,B31,B7
typical_cds_rare	Chr1	16670994	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1	4	A22,B28,B31,B7
typical_cds_rare	Chr1	16671207	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	5	A22,C34,C63,C67,D4
lof_cds	Chr1	16671219	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	2	B19,B27
typical_cds_rare	Chr1	16671219	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	2	B19,B27
typical_cds_rare	Chr1	16671307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	C23
lof_cds	Chr1	16671537	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	2	B31,C35
typical_cds_rare	Chr1	16671537	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	2	B31,C35
typical_cds_rare	Chr1	16671599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	3	B113,B36,C55
typical_cds_rare	Chr1	16671726	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	2	B19,B27
typical_cds_rare	Chr1	16671786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	C50
typical_cds_rare	Chr1	16671862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	5	B2,B48,B9,C23,C83
lof_cds	Chr1	16671866	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	C26
typical_cds_rare	Chr1	16671866	CAT	C	INDEL	2bp_deletion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	C26
lof_cds	Chr1	16671872	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	C26
typical_cds_rare	Chr1	16671872	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	C26
typical_cds_rare	Chr1	16671894	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	D10
typical_cds_rare	Chr1	16672042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	B97
typical_cds_rare	Chr1	16672054	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	2	B105,C65
typical_cds_rare	Chr1	16672109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006770	SmilChr01G000760	131006770	rna-XM_057933906.1,rna-XM_057933907.1	1	B129