source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	17539274	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	2	B23,D10
typical_cds_rare	Chr1	17539274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	2	B23,D10
typical_cds_rare	Chr1	17539280	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	B23
typical_cds_rare	Chr1	17539282	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	C16
lof_cds	Chr1	17539286	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	37	A1,A11,A24,A4,A8,A9,B106,B107,B123,B125,B133,B21,B25,B3,B36,B37,B49,B50,B53,B61,B74,B85,B86,B88,B90,B91,C20,C35,C4,C43,C45,C47,C57,C61,C71,C85,D6
typical_cds_rare	Chr1	17539288	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	B131,B43,C27
typical_cds_rare	Chr1	17539293	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	B104
lof_cds	Chr1	17539302	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	2	B59,C76
typical_cds_rare	Chr1	17539302	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	2	B59,C76
typical_cds_rare	Chr1	17539306	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	5	B111,B131,B53,C57,C66
typical_cds_rare	Chr1	17539307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	B23,B43,C27
lof_cds	Chr1	17539317	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	18	B110,B114,B13,B14,B28,B29,B42,B60,B84,B86,C35,C37,C50,C53,C64,C81,C83,D8
typical_cds_rare	Chr1	17539339	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	5	B25,B45,B79,C52,C71
typical_cds_rare	Chr1	17539355	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	4	B139,B47,B82,D7
lof_cds	Chr1	17539359	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	20	A22,A8,A9,B107,B21,B30,B33,B48,B63,B83,B94,B99,C26,C55,C71,C74,C79,C84,C86,D8
lof_cds	Chr1	17539368	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	20	A16,A7,B138,B16,B17,B20,B53,B71,B75,B85,B92,C12,C14,C22,C5,C53,C58,C66,C72,C85
lof_cds	Chr1	17539371	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	20	A16,A7,B138,B17,B20,B53,B71,B75,B85,B92,C12,C14,C22,C5,C53,C58,C66,C72,C85,D3
typical_cds_rare	Chr1	17539405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	4	A16,A9,B10,B3
lof_cds	Chr1	17539434	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	14	A16,A20,B10,B117,B130,B15,B3,B37,B41,B94,C49,C71,D4,D5
lof_cds	Chr1	17539435	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	4	B1,B70,C29,C68
typical_cds_rare	Chr1	17539435	A	AC	INDEL	1bp_insertion	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	4	B1,B70,C29,C68
typical_cds_rare	Chr1	17539453	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	B136,B48,C64
typical_cds_rare	Chr1	17539454	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	5	B1,B31,B70,C29,C68
lof_cds	Chr1	17539479	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	24	A16,A21,B104,B138,B16,B17,B20,B49,B55,B71,B85,B90,C12,C14,C24,C5,C53,C57,C58,C64,C66,C7,C72,D3
typical_cds_rare	Chr1	17539551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	A19,A4,B24
lof_cds	Chr1	17539566	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	B91
typical_cds_rare	Chr1	17539566	TA	T	INDEL	1bp_deletion	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	B91
lof_cds	Chr1	17539571	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	19	A5,B109,B131,B137,B14,B42,B44,B99,C14,C18,C39,C43,C53,C56,C67,C75,C8,D11,D3
lof_cds	Chr1	17539583	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	22	B102,B120,B126,B130,B134,B135,B139,B28,B51,B59,B69,B84,B98,C13,C21,C28,C33,C4,C56,C68,C72,D11
typical_cds_rare	Chr1	17539591	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	B34
typical_cds_rare	Chr1	17539597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	B34
typical_cds_rare	Chr1	17539610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	B124,B22,C25
typical_cds_rare	Chr1	17539615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	4	A7,B122,C16,C60
lof_cds	Chr1	17539619	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	12	A10,B41,B45,B47,B58,C15,C20,C48,C71,C74,D11,D4
lof_cds	Chr1	17539625	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	10	A10,B41,B47,B58,C20,C63,C71,C74,D11,D4
lof_cds	Chr1	17539629	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	9	A10,B41,B47,B58,C20,C63,C71,C74,D11
lof_cds	Chr1	17539633	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	9	A10,B41,B47,B58,C20,C63,C71,C74,D11
lof_cds	Chr1	17539639	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	10	A1,B137,B44,B99,C18,C39,C56,C8,D2,D3
lof_cds	Chr1	17539643	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	9	A10,B41,B47,B58,C20,C63,C71,C74,D11
typical_cds_rare	Chr1	17539646	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	B34
typical_cds_rare	Chr1	17539756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	A7,C16,C61
typical_cds_rare	Chr1	17539780	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	C15
typical_cds_rare	Chr1	17539784	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	1	A7
typical_cds_rare	Chr1	17539794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	A7,C16,C61
typical_cds_rare	Chr1	17539798	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	2	B17,B30
typical_cds_rare	Chr1	17539827	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	4	A7,B76,B90,C5
typical_cds_rare	Chr1	17539828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	3	A7,B90,C5
lof_cds	Chr1	17539845	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	2	B117,B90
typical_cds_rare	Chr1	17539845	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	2	B117,B90
lof_cds	Chr1	17539854	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	64	A19,A20,A21,A6,B100,B102,B103,B109,B114,B118,B121,B122,B133,B134,B17,B19,B20,B30,B32,B35,B36,B38,B39,B4,B45,B48,B50,B51,B53,B62,B64,B71,B73,B76,B79,B83,B84,B87,B9,B97,B99,C10,C15,C18,C2,C23,C26,C34,C36,C38,C56,C59,C6,C60,C7,C70,C72,C77,C79,C81,C84,D3,D5,D8
lof_cds	Chr1	17539882	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	52	A20,A21,A6,B100,B102,B103,B114,B118,B121,B122,B17,B19,B20,B30,B32,B35,B38,B39,B4,B45,B48,B51,B62,B64,B71,B73,B76,B79,B83,B84,B87,B9,B97,C10,C15,C18,C2,C23,C34,C36,C38,C56,C59,C6,C60,C7,C72,C77,C79,C81,C84,D3
lof_cds	Chr1	17539904	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130989690	SmilChr01G000812	130989690	rna-XM_057913783.1	115	A13,A15,A2,A20,A22,A23,A25,A3,A5,A6,A7,B1,B10,B100,B101,B103,B106,B108,B11,B111,B113,B115,B118,B120,B127,B128,B131,B132,B135,B136,B138,B139,B14,B140,B16,B18,B22,B24,B25,B27,B28,B31,B34,B5,B52,B54,B56,B59,B60,B65,B67,B70,B73,B74,B77,B79,B8,B81,B82,B84,B86,B89,B91,B95,B96,B98,C1,C11,C15,C17,C18,C2,C20,C21,C24,C25,C27,C28,C30,C31,C32,C33,C36,C37,C39,C4,C40,C41,C44,C45,C46,C49,C5,C50,C51,C53,C55,C57,C59,C64,C66,C68,C69,C70,C72,C75,C80,C84,C86,D10,D11,D2,D4,D7,D9