source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	19476855	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	B76,B91,C30
typical_cds_rare	Chr1	19476869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B104
typical_cds_rare	Chr1	19476886	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B85
typical_cds_rare	Chr1	19476915	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	C18,D2
typical_cds_rare	Chr1	19476934	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B85
typical_cds_rare	Chr1	19476935	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B85
typical_cds_rare	Chr1	19477046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B65
typical_cds_rare	Chr1	19477054	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B65
typical_cds_rare	Chr1	19477057	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	B11,C51
typical_cds_rare	Chr1	19477089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	B11,B33,C51
typical_cds_rare	Chr1	19477109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	B122,B54,C66
typical_cds_rare	Chr1	19478172	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B29
lof_cds	Chr1	19478182	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	38	A10,A24,B105,B112,B117,B121,B129,B134,B137,B139,B21,B23,B33,B40,B46,B49,B57,B61,B64,B76,B86,B93,C12,C27,C49,C5,C53,C56,C58,C60,C7,C77,C78,C79,C81,C9,D10,D9
typical_cds_rare	Chr1	19478192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B46
typical_cds_rare	Chr1	19478194	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B104
typical_cds_rare	Chr1	19478221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	4	B100,B135,C32,C68
typical_cds_rare	Chr1	19478342	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	B29,B72,B75
lof_cds	Chr1	19478438	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B29
typical_cds_rare	Chr1	19478438	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B29
typical_cds_rare	Chr1	19478474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B32
typical_cds_rare	Chr1	19478609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	D11
typical_cds_rare	Chr1	19478621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	A23,B104
lof_cds	Chr1	19478668	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	17	A10,A24,B117,B137,B139,B23,B40,B46,B57,C12,C31,C5,C56,C60,C78,D10,D4
typical_cds_rare	Chr1	19478698	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	B128,B7,B73
lof_cds	Chr1	19478732	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	12	A10,A24,B137,B139,B23,B46,C31,C5,C60,C78,D10,D4
typical_cds_rare	Chr1	19478869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	D11
typical_cds_rare	Chr1	19478889	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	4	A25,B53,B86,B89
typical_cds_rare	Chr1	19478923	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B29
typical_cds_rare	Chr1	19479063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B66
typical_cds_rare	Chr1	19479138	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B29
typical_cds_rare	Chr1	19479140	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	4	A4,B129,B16,B86
typical_cds_rare	Chr1	19479173	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	B102,B33
typical_cds_rare	Chr1	19479186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	C11,C4,C80
typical_cds_rare	Chr1	19479190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	C11,C4,C80
typical_cds_rare	Chr1	19479223	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	D11
typical_cds_rare	Chr1	19479241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	B33,C61
typical_cds_rare	Chr1	19479242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	C35,C37,C46
typical_cds_rare	Chr1	19479275	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	C35,C46,C60
typical_cds_rare	Chr1	19479280	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	C51
typical_cds_rare	Chr1	19479288	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	5	B119,B84,C13,C16,C54
lof_cds	Chr1	19479291	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	13	A13,B110,B117,B128,B132,B2,B53,B70,C11,C13,C30,C4,C40
lof_cds	Chr1	19479294	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	13	A13,B110,B117,B128,B132,B2,B53,B70,C11,C13,C30,C4,C40
lof_cds	Chr1	19479295	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	C35,C46
typical_cds_rare	Chr1	19479295	ACT	A	INDEL	2bp_deletion	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	C35,C46
typical_cds_rare	Chr1	19479308	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B104
typical_cds_rare	Chr1	19479345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	5	B132,B2,B53,C11,C4
lof_cds	Chr1	19479350	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	5	B112,B16,B81,C35,C46
typical_cds_rare	Chr1	19479350	A	AT	INDEL	1bp_insertion	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	5	B112,B16,B81,C35,C46
lof_cds	Chr1	19479353	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B16
typical_cds_rare	Chr1	19479353	AG	A	INDEL	1bp_deletion	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B16
typical_cds_rare	Chr1	19479392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	B47,B63
lof_cds	Chr1	19479409	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	A22
typical_cds_rare	Chr1	19479409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	A22
typical_cds_rare	Chr1	19479499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	B109,B16
lof_cds	Chr1	19479509	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	61	A1,A13,A20,A22,A3,A6,A8,B109,B111,B118,B119,B120,B124,B126,B13,B135,B14,B16,B20,B3,B39,B6,B60,B71,B79,B8,B83,B85,B91,B94,B99,C11,C13,C16,C18,C2,C23,C26,C27,C30,C32,C35,C36,C38,C39,C4,C44,C46,C48,C55,C62,C69,C76,C82,C85,C87,D1,D11,D2,D3,D7
lof_cds	Chr1	19479513	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	64	A1,A11,A13,A20,A22,A3,A6,A8,B111,B118,B119,B120,B124,B126,B13,B135,B14,B15,B20,B3,B39,B6,B60,B71,B75,B79,B8,B83,B85,B91,B94,B99,C11,C13,C16,C18,C2,C23,C26,C27,C30,C32,C35,C36,C38,C39,C4,C44,C46,C48,C55,C62,C69,C76,C8,C82,C85,C87,D1,D11,D2,D3,D6,D7
typical_cds_rare	Chr1	19479514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	5	B100,B105,B33,C29,C61
typical_cds_rare	Chr1	19479526	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	B119,B14,C39
typical_cds_rare	Chr1	19479585	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	3	B127,B65,B90
typical_cds_rare	Chr1	19479594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	B65,B90
typical_cds_rare	Chr1	19479600	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	2	B65,B90
lof_cds	Chr1	19479604	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	34	A10,A18,A24,B117,B122,B137,B139,B19,B23,B40,B41,B45,B46,B57,B61,B9,B93,C12,C26,C31,C5,C53,C56,C58,C60,C7,C72,C78,C84,C85,C9,D10,D4,D8
typical_cds_rare	Chr1	19479623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B29
typical_cds_rare	Chr1	19479674	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B49
typical_cds_rare	Chr1	19479675	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	5	A3,B54,C10,C82,D8
typical_cds_rare	Chr1	19479768	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B29
typical_cds_rare	Chr1	19479789	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	B65
lof_cds	Chr1	19479875	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	C25
typical_cds_rare	Chr1	19479875	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	1	C25
typical_cds_rare	Chr1	19479880	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	5	B107,B118,B29,C68,C69
lof_cds	Chr1	19479944	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	61	A1,A3,A6,A8,B102,B106,B107,B109,B112,B118,B120,B126,B135,B15,B18,B19,B2,B25,B29,B3,B38,B39,B5,B55,B57,B62,B67,B70,B71,B74,B76,B82,B85,B88,B9,B95,B99,C13,C16,C18,C19,C2,C23,C38,C44,C45,C46,C48,C50,C54,C61,C65,C68,C69,C71,C73,C8,C81,C82,D4,D8
lof_cds	Chr1	19479947	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993794	SmilChr01G000921	130993794	rna-XM_057918854.1	61	A1,A3,A6,A8,B102,B106,B107,B109,B112,B118,B120,B126,B135,B15,B18,B19,B2,B25,B29,B3,B38,B39,B5,B55,B57,B62,B67,B70,B71,B74,B76,B82,B85,B88,B9,B95,B99,C13,C16,C18,C19,C2,C23,C38,C44,C45,C46,C48,C50,C54,C61,C65,C68,C69,C71,C73,C8,C81,C82,D4,D8