source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	19677734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B139
typical_cds_rare	Chr1	19677761	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C16
typical_cds_rare	Chr1	19677765	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A6,B11,B53,B63,B83
typical_cds_rare	Chr1	19677766	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A6,B11,B53,B63,B83
lof_cds	Chr1	19677831	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	16	B114,B119,B121,B129,B36,B38,B39,B53,B64,B86,B87,C10,C12,C49,C77,C81
typical_cds_rare	Chr1	19677855	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D10
lof_cds	Chr1	19677961	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	21	A16,A19,A5,B1,B105,B108,B49,B50,B58,B69,B77,B8,C10,C16,C23,C26,C56,C61,C65,C70,C85
typical_cds_rare	Chr1	19677978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C85
typical_cds_rare	Chr1	19677980	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D10
typical_cds_rare	Chr1	19677988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B15,B19
typical_cds_rare	Chr1	19678093	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B26,B61
typical_cds_rare	Chr1	19678190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	A14,B33,B99,D10
typical_cds_rare	Chr1	19678191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B37
lof_cds	Chr1	19678226	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	52	A25,A6,B102,B106,B114,B117,B119,B120,B121,B129,B134,B139,B15,B17,B2,B36,B37,B38,B39,B49,B53,B55,B62,B64,B7,B74,B76,B83,B86,B87,B95,B97,C10,C12,C13,C22,C26,C28,C37,C4,C49,C59,C70,C72,C77,C79,C81,C83,C86,C9,D1,D5
typical_cds_rare	Chr1	19678243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	B130,B140,B26,C38
typical_cds_rare	Chr1	19678330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B15,B19,C74
lof_cds	Chr1	19678429	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	13	A4,B127,B26,B34,B41,B68,C1,C31,C45,C65,C7,C78,C86
typical_cds_rare	Chr1	19678451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B37
typical_cds_rare	Chr1	19678455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C73
typical_cds_rare	Chr1	19678466	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	B34,B99,C64,C82
typical_cds_rare	Chr1	19678474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B37
typical_cds_rare	Chr1	19678482	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	A14,B33,B99,D10
lof_cds	Chr1	19678529	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	53	A25,A6,B102,B106,B114,B117,B119,B120,B129,B134,B139,B15,B17,B2,B36,B37,B38,B39,B49,B53,B55,B62,B64,B7,B74,B76,B83,B86,B87,B95,B97,C10,C12,C13,C22,C26,C28,C37,C4,C49,C59,C70,C72,C77,C79,C81,C83,C86,C9,D1,D10,D3,D5
typical_cds_rare	Chr1	19678560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	A3,C37,C7
typical_cds_rare	Chr1	19678583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	A18,D10
typical_cds_rare	Chr1	19678609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C37
lof_cds	Chr1	19678611	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B107
typical_cds_rare	Chr1	19678611	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B107
typical_cds_rare	Chr1	19678618	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C37
typical_cds_rare	Chr1	19678708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B37
typical_cds_rare	Chr1	19678709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C6
typical_cds_rare	Chr1	19678721	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B104
typical_cds_rare	Chr1	19678797	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	A22,B111,B69
typical_cds_rare	Chr1	19678813	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D1
typical_cds_rare	Chr1	19678814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	A14,B19,D10
lof_cds	Chr1	19678819	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B91,C68
typical_cds_rare	Chr1	19678819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B91,C68
typical_cds_rare	Chr1	19678834	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	C13,C74
typical_cds_rare	Chr1	19678855	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B7
typical_cds_rare	Chr1	19678864	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	B24,B32,B89,C71
typical_cds_rare	Chr1	19678871	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D10
typical_cds_rare	Chr1	19678872	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A16,B104,C51,C52,C74
typical_cds_rare	Chr1	19678880	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D10
typical_cds_rare	Chr1	19678913	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B22,B30,B78,C15,C25
lof_cds	Chr1	19678930	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D10
typical_cds_rare	Chr1	19678930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D10
typical_cds_rare	Chr1	19678995	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B32,C42
lof_cds	Chr1	19679020	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A14,A18,A22,B126,C9
typical_cds_rare	Chr1	19679020	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A14,A18,A22,B126,C9
lof_cds	Chr1	19679029	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	A14,A22,B126
typical_cds_rare	Chr1	19679029	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	A14,A22,B126
typical_cds_rare	Chr1	19679039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B1
typical_cds_rare	Chr1	19679049	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	D10
lof_cds	Chr1	19679063	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	18	A24,A3,B10,B100,B111,B115,B118,B50,B70,B89,B98,C11,C15,C38,C5,C75,C84,D5
lof_cds	Chr1	19679064	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	18	A24,A3,B10,B100,B111,B115,B118,B50,B70,B89,B98,C11,C15,C38,C5,C75,C84,D5
typical_cds_rare	Chr1	19679071	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C13
lof_cds	Chr1	19679072	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	19	A10,A24,A3,B10,B100,B111,B115,B118,B50,B70,B89,B98,C11,C15,C38,C5,C75,C84,D5
lof_cds	Chr1	19679157	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	23	A10,A15,B100,B111,B115,B135,B136,B5,B50,B68,B70,B82,B89,C11,C15,C25,C34,C38,C5,C69,C75,D2,D5
lof_cds	Chr1	19679158	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	22	A10,A15,B100,B111,B115,B135,B136,B5,B50,B68,B70,B82,B89,C11,C15,C25,C34,C38,C5,C69,C75,D2
lof_cds	Chr1	19679194	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	45	A10,A11,A15,A18,A3,A7,A9,B109,B111,B115,B117,B121,B122,B123,B129,B135,B136,B18,B20,B31,B54,B59,B6,B70,B77,B82,B85,B9,B93,C1,C15,C34,C38,C40,C46,C5,C50,C51,C55,C65,C67,C69,C84,C9,D2
lof_cds	Chr1	19679200	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	13	A10,A15,B115,B135,B136,B70,B82,C15,C34,C38,C5,C69,D2
typical_cds_rare	Chr1	19679228	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	C40,C65
lof_cds	Chr1	19679304	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	12	A18,A9,B114,B25,B62,B94,C27,C31,C56,C65,C70,C74
lof_cds	Chr1	19679324	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	B93,C12,C18,C62
typical_cds_rare	Chr1	19679324	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	B93,C12,C18,C62
lof_cds	Chr1	19679331	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	65	A10,A11,A19,A20,A23,A24,A4,A5,B102,B111,B121,B123,B13,B130,B135,B20,B24,B25,B27,B3,B30,B35,B40,B42,B43,B44,B45,B47,B51,B53,B60,B66,B71,B75,B86,B94,B98,C1,C14,C23,C31,C33,C34,C4,C42,C44,C5,C52,C54,C55,C57,C58,C6,C62,C72,C73,C74,C77,C8,C84,D1,D11,D2,D7,D9
lof_cds	Chr1	19679346	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B15,B19
typical_cds_rare	Chr1	19679346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B15,B19
typical_cds_rare	Chr1	19679360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B114
typical_cds_rare	Chr1	19679378	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B87
lof_cds	Chr1	19679403	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B1,B21,D1
typical_cds_rare	Chr1	19679403	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B1,B21,D1
typical_cds_rare	Chr1	19679418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B11,B117,B53,B83,B89
lof_cds	Chr1	19679430	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	27	A10,A11,A13,A25,B13,B21,B28,B36,B46,B52,B71,B82,B85,B90,B91,B92,B93,C16,C31,C32,C48,C61,C62,C68,C75,C86,D3
lof_cds	Chr1	19679460	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	A1,B73
typical_cds_rare	Chr1	19679460	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	A1,B73
typical_cds_rare	Chr1	19679464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B13,C74
typical_cds_rare	Chr1	19679489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	A20,C54
lof_cds	Chr1	19679519	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	7	A6,B11,B117,B53,B63,B83,B89
typical_cds_rare	Chr1	19679521	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B66
typical_cds_rare	Chr1	19679530	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B92
typical_cds_rare	Chr1	19679534	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B94
typical_cds_rare	Chr1	19679550	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A3,B113,B119,C31,C70
typical_cds_rare	Chr1	19679580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A4,B117,B129,B18,B26
typical_cds_rare	Chr1	19679614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B3
typical_cds_rare	Chr1	19679616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B3
lof_cds	Chr1	19679640	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	19	A16,A9,B112,B118,B12,B126,B130,B136,B24,B25,B50,B64,B7,B79,B81,C39,C72,C81,C87
typical_cds_rare	Chr1	19679710	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B37
typical_cds_rare	Chr1	19679739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B15
typical_cds_rare	Chr1	19679753	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B53,C42
lof_cds	Chr1	19679833	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	23	A16,A18,A19,A25,A5,B105,B108,B47,B49,B50,B58,B69,B75,B77,B8,C10,C16,C23,C26,C56,C61,C65,C70
lof_cds	Chr1	19679840	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B104
typical_cds_rare	Chr1	19679840	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B104
typical_cds_rare	Chr1	19679917	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	A11
typical_cds_rare	Chr1	19680205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	B100,B140,C11,C69
typical_cds_rare	Chr1	19680208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B139,C67
typical_cds_rare	Chr1	19680212	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B7
typical_cds_rare	Chr1	19680255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A20,B104,B127,C54,C79
typical_cds_rare	Chr1	19680273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B91
typical_cds_rare	Chr1	19680303	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B27,C43,C73
typical_cds_rare	Chr1	19680315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C73
typical_cds_rare	Chr1	19680322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	C56,C73
typical_cds_rare	Chr1	19680327	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B106,B29,C20,C56,C61
typical_cds_rare	Chr1	19680330	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	C56,C73
typical_cds_rare	Chr1	19680343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	A18,B62
typical_cds_rare	Chr1	19680360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B80,C56
typical_cds_rare	Chr1	19680375	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B99,D10
lof_cds	Chr1	19680394	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	111	A1,A14,A16,A19,A20,A22,A23,A4,A9,B1,B102,B108,B110,B111,B112,B115,B117,B118,B119,B12,B120,B122,B123,B125,B126,B127,B128,B133,B134,B140,B16,B18,B22,B23,B24,B26,B27,B28,B3,B30,B32,B33,B35,B36,B37,B40,B42,B43,B50,B54,B55,B61,B63,B64,B69,B70,B8,B80,B81,B82,B85,B86,B87,B88,B89,B91,B93,B97,B99,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C23,C26,C28,C36,C38,C41,C42,C43,C44,C45,C46,C47,C58,C6,C63,C65,C66,C67,C7,C71,C77,C78,C8,C81,C83,C85,D2,D3,D4,D5,D8,D9
typical_cds_rare	Chr1	19680427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	A16,B37,C45,C51
typical_cds_rare	Chr1	19680439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B87
lof_cds	Chr1	19680448	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	6	A4,B125,B86,C19,C45,C65
lof_cds	Chr1	19680452	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B54,C36
typical_cds_rare	Chr1	19680452	GCT	G	INDEL	2bp_deletion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B54,C36
lof_cds	Chr1	19680453	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	26	A9,B100,B110,B138,B22,B45,B58,B59,B63,B72,B74,B85,B9,C24,C33,C34,C4,C40,C48,C55,C56,C77,C82,C85,D2,D4
lof_cds	Chr1	19680455	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	26	A9,B100,B110,B138,B22,B45,B58,B59,B63,B72,B74,B85,B9,C24,C33,C34,C4,C40,C48,C55,C56,C77,C82,C85,D2,D4
lof_cds	Chr1	19680458	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	25	A9,B100,B110,B138,B22,B58,B59,B63,B72,B74,B85,B9,C24,C33,C34,C4,C40,C48,C55,C56,C77,C82,C85,D2,D4
typical_cds_rare	Chr1	19680498	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B22,B72,C53
lof_cds	Chr1	19680503	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B22,B58,B63,B74,C81
typical_cds_rare	Chr1	19680503	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B22,B58,B63,B74,C81
lof_cds	Chr1	19680533	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B136,B24,B61,B78,C64
typical_cds_rare	Chr1	19680533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B136,B24,B61,B78,C64
lof_cds	Chr1	19680537	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B14
typical_cds_rare	Chr1	19680537	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B14
typical_cds_rare	Chr1	19680545	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B63,C24,C34,C40,C77
lof_cds	Chr1	19680554	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B63,C40,C77
typical_cds_rare	Chr1	19680554	TA	T	INDEL	1bp_deletion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B63,C40,C77
lof_cds	Chr1	19680560	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B63,C40,C77
typical_cds_rare	Chr1	19680560	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B63,C40,C77
lof_cds	Chr1	19680572	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	50	A10,A13,A19,A2,A3,A4,A9,B108,B114,B122,B126,B128,B14,B140,B39,B47,B59,B61,B64,B7,B70,B78,B81,B94,B95,B99,C11,C13,C15,C16,C18,C19,C31,C35,C36,C41,C43,C45,C46,C47,C58,C61,C65,C68,C69,C73,C75,C8,C80,D2
lof_cds	Chr1	19680590	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	108	A10,A11,A13,A15,A16,A18,A19,A3,A4,A7,A9,B1,B10,B107,B108,B109,B11,B112,B114,B118,B12,B122,B124,B126,B128,B129,B130,B135,B136,B138,B14,B140,B24,B25,B31,B32,B34,B35,B39,B43,B47,B5,B51,B52,B53,B54,B55,B59,B60,B61,B64,B65,B7,B70,B71,B75,B76,B77,B78,B79,B81,B83,B86,B87,B9,B93,B94,B95,B98,B99,C11,C13,C14,C15,C16,C18,C19,C2,C31,C35,C36,C41,C42,C43,C45,C46,C47,C52,C53,C57,C58,C59,C61,C63,C65,C68,C69,C71,C72,C73,C75,C8,C80,C9,D10,D2,D6,D9
typical_cds_rare	Chr1	19680594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B61,C12
typical_cds_rare	Chr1	19680600	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	C13,C74
typical_cds_rare	Chr1	19680610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C74
lof_cds	Chr1	19680629	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B104,B37
typical_cds_rare	Chr1	19680629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B104,B37
typical_cds_rare	Chr1	19680639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	C9
typical_cds_rare	Chr1	19680641	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	A20,B104,B41,C38,C45
lof_cds	Chr1	19680727	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	17	A10,A20,A3,B13,B132,B39,B51,B52,B65,B66,B87,C30,C35,C50,C54,C64,D3
typical_cds_rare	Chr1	19680785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B100
typical_cds_rare	Chr1	19680787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B71,C47
lof_cds	Chr1	19680809	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	7	A7,B111,B36,B9,C17,C18,C35
typical_cds_rare	Chr1	19680812	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	A23
lof_cds	Chr1	19680816	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	A7,B111,C17,C35
typical_cds_rare	Chr1	19680816	CG	C	INDEL	1bp_deletion	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	4	A7,B111,C17,C35
typical_cds_rare	Chr1	19680855	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B15
typical_cds_rare	Chr1	19680869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	B33,B80
typical_cds_rare	Chr1	19680876	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	C13,C74
typical_cds_rare	Chr1	19680888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	5	B108,C56,C61,C65,C70
lof_cds	Chr1	19680924	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	133	A14,A16,A18,A19,A22,A25,A3,A4,A8,B1,B105,B107,B108,B109,B11,B110,B117,B118,B119,B120,B123,B124,B125,B128,B129,B132,B133,B136,B137,B138,B139,B140,B16,B17,B19,B2,B24,B25,B28,B30,B31,B32,B33,B34,B36,B37,B4,B41,B44,B46,B47,B50,B51,B53,B54,B55,B58,B6,B60,B61,B62,B63,B65,B66,B70,B73,B74,B75,B76,B77,B78,B79,B80,B82,B91,B95,B97,B98,C14,C15,C16,C17,C18,C2,C21,C23,C24,C25,C26,C27,C28,C30,C31,C32,C33,C38,C39,C4,C41,C43,C44,C45,C46,C47,C48,C49,C52,C53,C56,C61,C62,C63,C64,C69,C71,C73,C75,C76,C78,C79,C8,C80,C82,C83,C84,C87,C9,D10,D2,D3,D4,D6,D9
lof_cds	Chr1	19680927	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	131	A14,A16,A18,A19,A22,A25,A3,A4,A8,B1,B105,B107,B108,B109,B11,B110,B117,B118,B119,B120,B123,B124,B125,B128,B129,B132,B133,B136,B137,B138,B139,B140,B16,B17,B19,B2,B24,B25,B28,B30,B31,B32,B33,B34,B36,B37,B4,B41,B44,B46,B47,B50,B51,B53,B54,B55,B58,B6,B60,B61,B62,B63,B65,B66,B70,B73,B74,B75,B76,B77,B78,B79,B80,B82,B91,B95,B97,B98,C14,C15,C16,C17,C18,C2,C21,C23,C24,C25,C26,C27,C28,C30,C32,C33,C38,C39,C4,C41,C43,C44,C45,C46,C47,C48,C49,C52,C53,C61,C62,C63,C64,C69,C71,C73,C75,C76,C78,C79,C8,C80,C82,C83,C84,C87,C9,D10,D2,D3,D4,D6,D9
typical_cds_rare	Chr1	19680957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B18,C72,D3
typical_cds_rare	Chr1	19680997	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B101
typical_cds_rare	Chr1	19681032	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B13,C13,C74
typical_cds_rare	Chr1	19681034	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B1
typical_cds_rare	Chr1	19681035	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	1	B139
lof_cds	Chr1	19681074	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	11	A16,A19,A5,B1,B108,B77,B8,C61,C70,C85,C86
typical_cds_rare	Chr1	19681112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	3	B1,B21,D1
typical_cds_rare	Chr1	19681115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	2	A18,B62
lof_cds	Chr1	19681151	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	167	A1,A10,A13,A14,A19,A2,A20,A21,A22,A23,A25,A3,A4,A6,A7,A8,A9,B1,B10,B100,B101,B102,B104,B105,B106,B108,B109,B110,B111,B112,B114,B115,B117,B120,B121,B122,B123,B125,B126,B127,B128,B13,B131,B132,B134,B136,B137,B139,B14,B140,B16,B17,B18,B19,B2,B22,B23,B25,B26,B27,B28,B3,B30,B31,B33,B37,B38,B40,B41,B42,B43,B44,B45,B46,B47,B5,B50,B51,B54,B55,B58,B59,B6,B61,B65,B66,B67,B68,B69,B7,B70,B71,B73,B74,B77,B78,B80,B81,B82,B85,B87,B90,B91,B92,B95,B98,C11,C13,C15,C16,C17,C18,C19,C2,C21,C22,C23,C27,C28,C3,C30,C31,C32,C34,C35,C36,C38,C40,C41,C43,C44,C45,C46,C47,C48,C49,C52,C53,C55,C56,C58,C6,C61,C62,C64,C65,C66,C67,C68,C69,C73,C74,C75,C77,C78,C79,C8,C80,C81,C87,C9,D10,D11,D2,D3,D5,D7
lof_cds	Chr1	19681154	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130994060	SmilChr01G000930	130994060	rna-XM_057919115.1	167	A1,A10,A13,A14,A19,A2,A20,A21,A22,A23,A25,A3,A4,A6,A7,A8,A9,B1,B10,B100,B101,B102,B104,B105,B106,B108,B109,B110,B111,B112,B114,B115,B117,B120,B121,B122,B123,B125,B126,B127,B128,B13,B131,B132,B134,B136,B137,B139,B14,B140,B16,B17,B18,B19,B2,B22,B23,B25,B26,B27,B28,B3,B30,B31,B33,B37,B38,B40,B41,B42,B43,B44,B45,B46,B47,B5,B50,B51,B54,B55,B58,B59,B6,B61,B65,B66,B67,B68,B69,B7,B70,B71,B73,B74,B77,B78,B80,B81,B82,B85,B87,B90,B91,B92,B95,B98,C11,C13,C15,C16,C17,C18,C19,C2,C21,C22,C23,C27,C28,C3,C30,C31,C32,C34,C35,C36,C38,C40,C41,C43,C44,C45,C46,C47,C48,C49,C52,C53,C55,C56,C58,C6,C61,C62,C64,C65,C66,C67,C68,C69,C73,C74,C75,C77,C78,C79,C8,C80,C81,C87,C9,D10,D11,D2,D3,D5,D7