source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	21924783	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B85
typical_cds_rare	Chr1	21924785	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B53,C18
typical_cds_rare	Chr1	21924786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	5	B124,B140,B7,C58,D4
typical_cds_rare	Chr1	21924828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A18,B128
lof_cds	Chr1	21924834	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	C76
typical_cds_rare	Chr1	21924834	T	TG	INDEL	1bp_insertion	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	C76
lof_cds	Chr1	21924855	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A18,B128
typical_cds_rare	Chr1	21924855	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A18,B128
typical_cds_rare	Chr1	21924875	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A18,B128
lof_cds	Chr1	21924913	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A18,B128
typical_cds_rare	Chr1	21924913	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A18,B128
typical_cds_rare	Chr1	21924915	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	B2,B6,C52,C8
typical_cds_rare	Chr1	21924932	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	B113,B51,B52,C10
typical_cds_rare	Chr1	21924987	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	B2,C52,C8
typical_cds_rare	Chr1	21925001	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B52
typical_cds_rare	Chr1	21925002	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B12
typical_cds_rare	Chr1	21925010	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B52
typical_cds_rare	Chr1	21925053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	5	B2,B27,B52,C25,C69
typical_cds_rare	Chr1	21925066	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B26,B53
lof_cds	Chr1	21925067	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B65
typical_cds_rare	Chr1	21925067	G	GT	INDEL	1bp_insertion	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B65
lof_cds	Chr1	21925112	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	B124,B50,C14,C50
typical_cds_rare	Chr1	21925112	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	B124,B50,C14,C50
lof_cds	Chr1	21925113	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	83	A13,A19,A2,A20,A3,A5,A6,A7,A8,B101,B102,B111,B113,B114,B115,B124,B127,B131,B132,B133,B135,B136,B20,B23,B24,B26,B27,B30,B31,B37,B41,B44,B46,B49,B50,B51,B52,B57,B6,B63,B67,B7,B70,B72,B75,B77,B78,B8,B84,B87,B89,B9,B91,B94,B95,B97,B99,C11,C12,C19,C21,C24,C44,C45,C47,C50,C51,C59,C6,C60,C63,C65,C69,C70,C71,C72,C75,C82,C83,C86,D11,D3,D9
lof_cds	Chr1	21925125	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	10	B1,B17,B19,B36,B53,B68,B94,C10,C14,C79
typical_cds_rare	Chr1	21925150	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B26,D3
typical_cds_rare	Chr1	21925151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B75
typical_cds_rare	Chr1	21925182	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B52
typical_cds_rare	Chr1	21925208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	B1,B94,B98
typical_cds_rare	Chr1	21925264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B75
lof_cds	Chr1	21925270	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	20	A10,B10,B101,B107,B11,B133,B16,B19,B22,B24,B31,B38,B39,B68,B71,B84,B91,C3,C60,C83
lof_cds	Chr1	21925297	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	B2,C52,C8
typical_cds_rare	Chr1	21925297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	B2,C52,C8
typical_cds_rare	Chr1	21925305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	B12,B124,B49,B79
typical_cds_rare	Chr1	21925315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	C20,C44
typical_cds_rare	Chr1	21925328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	C81
typical_cds_rare	Chr1	21925338	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B52
typical_cds_rare	Chr1	21925361	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	A11,B12,B55
lof_cds	Chr1	21925371	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	170	A1,A10,A11,A13,A14,A16,A2,A20,A24,A25,A3,A4,A6,A9,B1,B10,B103,B105,B107,B108,B11,B110,B113,B114,B118,B119,B12,B122,B125,B126,B127,B128,B129,B130,B131,B132,B133,B134,B136,B138,B139,B14,B140,B15,B16,B17,B19,B2,B21,B23,B24,B26,B27,B29,B3,B30,B31,B33,B35,B36,B37,B4,B40,B41,B42,B44,B45,B47,B48,B49,B5,B50,B51,B52,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B67,B69,B70,B71,B72,B73,B74,B75,B76,B77,B78,B8,B82,B85,B87,B9,B90,B92,B93,B94,B95,B96,B98,C10,C14,C15,C17,C19,C2,C21,C22,C24,C26,C29,C30,C31,C32,C33,C36,C38,C4,C40,C41,C42,C45,C47,C48,C49,C5,C50,C51,C52,C53,C54,C56,C57,C58,C59,C6,C61,C62,C64,C65,C66,C68,C7,C70,C71,C72,C73,C74,C76,C77,C78,C79,C8,C82,C83,C85,D1,D11,D5,D7,D9
lof_cds	Chr1	21925429	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	57	A11,A14,A15,A21,A4,A8,B10,B107,B109,B112,B122,B14,B140,B15,B16,B21,B25,B26,B30,B31,B33,B34,B4,B47,B49,B55,B58,B59,B69,B71,B73,B74,B83,B88,B95,C13,C16,C20,C22,C28,C3,C32,C33,C38,C39,C4,C52,C56,C67,C68,C71,C72,C73,C8,C80,C9,D2
lof_cds	Chr1	21925433	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B126
typical_cds_rare	Chr1	21925433	T	TC	INDEL	1bp_insertion	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B126
typical_cds_rare	Chr1	21925590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	B42,C35,C59,C77
typical_cds_rare	Chr1	21925608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B52
lof_cds	Chr1	21925620	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	5	B103,B12,B46,C37,C80
typical_cds_rare	Chr1	21925620	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	5	B103,B12,B46,C37,C80
typical_cds_rare	Chr1	21925626	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	B108,B123,B56,D4
typical_cds_rare	Chr1	21925631	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	5	B133,B31,B71,C60,C83
typical_cds_rare	Chr1	21925634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	C12
typical_cds_rare	Chr1	21925649	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B52
typical_cds_rare	Chr1	21925653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	C52
lof_cds	Chr1	21925819	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	7	B120,B28,B30,B87,C38,C51,D5
lof_cds	Chr1	21925820	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B2,C52
typical_cds_rare	Chr1	21925820	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B2,C52
typical_cds_rare	Chr1	21925825	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B71,C60
typical_cds_rare	Chr1	21925846	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	B124,B49,B79
typical_cds_rare	Chr1	21925847	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	B69,B9,C5
typical_cds_rare	Chr1	21925867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B2,C8
lof_cds	Chr1	21925869	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	51	A11,A14,A15,A21,A4,B10,B107,B109,B112,B122,B14,B140,B15,B16,B21,B26,B30,B31,B33,B4,B49,B55,B58,B69,B71,B73,B74,B84,B88,B93,B95,C13,C16,C22,C3,C32,C33,C39,C46,C52,C53,C56,C67,C68,C71,C72,C77,C8,C80,C9,D2
lof_cds	Chr1	21925898	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B26
typical_cds_rare	Chr1	21925898	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B26
typical_cds_rare	Chr1	21925918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B1,B17
typical_cds_rare	Chr1	21925978	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B79
lof_cds	Chr1	21925996	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	163	A10,A11,A13,A14,A15,A18,A2,A20,A21,A3,A4,A6,A7,A8,B1,B10,B101,B102,B107,B108,B109,B11,B112,B113,B114,B115,B118,B119,B12,B122,B123,B127,B131,B133,B136,B137,B14,B140,B15,B16,B17,B19,B2,B20,B21,B23,B25,B26,B3,B30,B31,B33,B34,B35,B36,B4,B40,B41,B42,B43,B44,B47,B49,B50,B51,B52,B53,B55,B56,B58,B59,B6,B65,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B83,B84,B85,B88,B89,B93,B94,B95,B96,B97,B98,B99,C10,C12,C13,C14,C16,C17,C18,C19,C20,C21,C22,C23,C24,C28,C3,C32,C33,C36,C37,C38,C39,C4,C40,C41,C44,C45,C46,C47,C50,C51,C52,C53,C56,C58,C59,C6,C60,C63,C64,C65,C66,C67,C68,C70,C71,C72,C73,C75,C77,C79,C8,C80,C81,C83,C85,C86,C9,D1,D11,D2,D3,D5,D7,D9
typical_cds_rare	Chr1	21926014	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B75
lof_cds	Chr1	21926055	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B124,B79
typical_cds_rare	Chr1	21926055	GAT	G	INDEL	2bp_deletion	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B124,B79
typical_cds_rare	Chr1	21926069	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	3	A6,C64,C8
typical_cds_rare	Chr1	21926071	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	C81
typical_cds_rare	Chr1	21926095	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B75,C64
typical_cds_rare	Chr1	21926102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B71,C60
lof_cds	Chr1	21926151	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A5,B13
typical_cds_rare	Chr1	21926151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	A5,B13
typical_cds_rare	Chr1	21926166	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	2	B9,C27
typical_cds_rare	Chr1	21926175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	1	B11
typical_cds_rare	Chr1	21926197	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998359	SmilChr01G001061	130998359	rna-XM_057923802.1	4	A8,B28,B30,C38