source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	22121434	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	A7,A8,B119
typical_cds_rare	Chr1	22121450	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B104,B15,C15,C41
typical_cds_rare	Chr1	22121487	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B99
typical_cds_rare	Chr1	22121516	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	A2,C37
typical_cds_rare	Chr1	22121521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B23,B51,B59,C48
typical_cds_rare	Chr1	22121524	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B27,C10,C13,C2
typical_cds_rare	Chr1	22121525	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B27,B47,B66,C66,C71
typical_cds_rare	Chr1	22121536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B128,B133,B35,B85,B99
typical_cds_rare	Chr1	22121571	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B38,B94,C26
typical_cds_rare	Chr1	22121590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B11,B13,B44,B88,C29
typical_cds_rare	Chr1	22121594	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B132,B54,C29
typical_cds_rare	Chr1	22121596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B118,B72,B80,C86
lof_cds	Chr1	22121626	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	8	B129,B27,C14,C29,C71,C77,C81,D5
typical_cds_rare	Chr1	22121629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B132,B54
lof_cds	Chr1	22121633	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B2
typical_cds_rare	Chr1	22121633	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B2
lof_cds	Chr1	22121666	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	7	B124,C10,C23,C28,C29,C55,C62
lof_cds	Chr1	22121679	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B12
typical_cds_rare	Chr1	22121679	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B12
lof_cds	Chr1	22121690	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	6	A3,B117,B82,B93,B98,C80
typical_cds_rare	Chr1	22121710	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B122,B124,C28,C29,C55
lof_cds	Chr1	22121739	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	C21
typical_cds_rare	Chr1	22121739	T	TGC	INDEL	2bp_insertion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	C21
typical_cds_rare	Chr1	22121786	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B36,C35,C7,C75
lof_cds	Chr1	22121788	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	16	A2,B110,B14,B23,B24,B27,B29,B39,B42,B50,B61,B76,C31,C8,D3,D5
typical_cds_rare	Chr1	22121811	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B15,C34,C36,C80
lof_cds	Chr1	22121823	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	10	B124,B32,B37,B38,B67,B89,B97,C60,C76,C80
typical_cds_rare	Chr1	22121833	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	D7
typical_cds_rare	Chr1	22121862	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B67,C76
typical_cds_rare	Chr1	22121872	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B40,B68,B69,D1
typical_cds_rare	Chr1	22121890	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B104,B15,B69
typical_cds_rare	Chr1	22121905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	A8,B68,B69
typical_cds_rare	Chr1	22121906	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B103,B37,B57,B77,B89
typical_cds_rare	Chr1	22121927	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B139
typical_cds_rare	Chr1	22121944	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	C1,C10
lof_cds	Chr1	22122058	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	25	A10,A2,A23,A6,A9,B12,B129,B140,B20,B48,B58,B73,B76,B86,B91,B96,C16,C30,C5,C52,C57,C74,C76,C86,D9
lof_cds	Chr1	22122080	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B122
typical_cds_rare	Chr1	22122080	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B122
lof_cds	Chr1	22122123	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B42
typical_cds_rare	Chr1	22122123	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B42
typical_cds_rare	Chr1	22122135	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B7,B78,B97
typical_cds_rare	Chr1	22122141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B10,B15,B99
typical_cds_rare	Chr1	22122172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B21,B47,B95,C87
lof_cds	Chr1	22122196	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	7	A15,A3,A5,B138,C2,C43,D9
typical_cds_rare	Chr1	22122207	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B132,B4,B74,C12
lof_cds	Chr1	22122233	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	26	A1,A16,A6,A9,B110,B113,B135,B29,B38,B39,B5,B57,B71,B74,B83,B95,C19,C24,C25,C32,C44,C55,C57,C68,C79,D8
lof_cds	Chr1	22122234	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	23	A21,A22,B113,B114,B115,B132,B56,B7,B72,B76,B78,B80,B96,B97,C2,C23,C3,C44,C49,C52,C64,C66,C77
typical_cds_rare	Chr1	22122243	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	A5
lof_cds	Chr1	22122268	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	6	B132,B4,B5,B74,C12,C9
lof_cds	Chr1	22122283	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B119,C77
typical_cds_rare	Chr1	22122283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B119,C77
lof_cds	Chr1	22122293	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B119,B40,B68,B7,C77
typical_cds_rare	Chr1	22122293	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B119,B40,B68,B7,C77
typical_cds_rare	Chr1	22122477	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B134,B136,D4
lof_cds	Chr1	22122504	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	88	A15,A18,A20,A22,A24,A25,A4,A6,B105,B108,B111,B114,B117,B118,B12,B122,B123,B127,B128,B13,B133,B138,B139,B14,B140,B15,B16,B23,B24,B25,B27,B28,B30,B33,B36,B38,B39,B4,B42,B43,B44,B45,B47,B52,B56,B66,B67,B70,B76,B77,B83,B85,B9,B91,B92,B99,C12,C21,C24,C27,C28,C30,C34,C37,C41,C47,C50,C56,C61,C64,C66,C67,C69,C7,C71,C72,C76,C77,C78,C79,C8,C81,C85,D10,D11,D6,D8,D9
typical_cds_rare	Chr1	22122513	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	A11,A21,B24,B63,B94
typical_cds_rare	Chr1	22122592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	C58
typical_cds_rare	Chr1	22122607	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	A18,B132,B77
typical_cds_rare	Chr1	22122633	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B17,C20,C51
typical_cds_rare	Chr1	22122671	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B114,B20,B51,C15,C23
typical_cds_rare	Chr1	22122696	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B113,B44,B83
lof_cds	Chr1	22122738	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	74	A1,A13,A15,A25,B1,B104,B107,B11,B112,B115,B117,B118,B119,B122,B124,B129,B13,B130,B136,B137,B140,B15,B17,B19,B2,B20,B21,B23,B28,B36,B49,B50,B51,B52,B53,B56,B57,B58,B59,B61,B68,B7,B78,B79,B80,B84,B89,B91,C10,C15,C16,C20,C23,C24,C25,C26,C27,C3,C32,C40,C42,C50,C51,C55,C56,C57,C64,C67,C7,C82,C84,C86,D4,D5
lof_cds	Chr1	22122745	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	A1,B2,B44,C27
typical_cds_rare	Chr1	22122745	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	A1,B2,B44,C27
typical_cds_rare	Chr1	22122748	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B121,B42,B43,C4,D10
typical_cds_rare	Chr1	22122758	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B86,B93,C23,C7,D7
typical_cds_rare	Chr1	22122772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	A22,B76,C49
typical_cds_rare	Chr1	22122843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B131,B2,B44,C12,C27
lof_cds	Chr1	22122856	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	6	B101,B11,B16,B74,C48,C62
typical_cds_rare	Chr1	22122860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	C35
typical_cds_rare	Chr1	22122898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B82,B86,C23,C87,D7
typical_cds_rare	Chr1	22122909	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	A16,B86,C6
typical_cds_rare	Chr1	22122923	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B130,B132,B73
typical_cds_rare	Chr1	22122951	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B27
typical_cds_rare	Chr1	22122966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B137
lof_cds	Chr1	22123006	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B35,B57,C49
typical_cds_rare	Chr1	22123006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B35,B57,C49
typical_cds_rare	Chr1	22123054	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	D4
typical_cds_rare	Chr1	22123067	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B134,B7,D9
typical_cds_rare	Chr1	22123069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B99,C87
typical_cds_rare	Chr1	22123101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B119,B40,C77
typical_cds_rare	Chr1	22123118	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	B104
typical_cds_rare	Chr1	22123137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	A8,B28,B35,C15,C8
typical_cds_rare	Chr1	22123168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	A22,B135,B96,C38,C48
lof_cds	Chr1	22123200	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B21,B26
typical_cds_rare	Chr1	22123200	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B21,B26
typical_cds_rare	Chr1	22123233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	A14,A16,B100,C69
lof_cds	Chr1	22123243	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	13	B109,B119,B122,B128,B129,B15,B17,B19,B52,C2,C26,C40,C64
lof_cds	Chr1	22123268	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B11,B115,B78,C12,C44
typical_cds_rare	Chr1	22123268	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B11,B115,B78,C12,C44
lof_cds	Chr1	22123269	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	17	A2,B45,B52,B53,B69,B84,B86,B87,C19,C27,C29,C51,C53,C68,C77,C86,C9
lof_cds	Chr1	22123307	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	7	B134,B21,B41,B47,B95,C55,C87
typical_cds_rare	Chr1	22123394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	4	B72,B99,C43,C8
lof_cds	Chr1	22123404	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B71,C53,D2
typical_cds_rare	Chr1	22123404	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B71,C53,D2
lof_cds	Chr1	22123522	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	27	A1,A10,A23,B111,B113,B125,B133,B136,B139,B14,B18,B45,B62,B65,B81,C21,C22,C30,C38,C5,C54,C58,C60,C79,C9,D1,D9
lof_cds	Chr1	22123540	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B46,C76
typical_cds_rare	Chr1	22123540	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B46,C76
typical_cds_rare	Chr1	22123606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	B118,B128,B56,B67,B79
typical_cds_rare	Chr1	22123659	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	3	B137,B39,B7
typical_cds_rare	Chr1	22123683	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	5	A8,B114,B48,B6,B83
lof_cds	Chr1	22123717	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	C77
typical_cds_rare	Chr1	22123717	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	1	C77
typical_cds_rare	Chr1	22123745	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007015	SmilChr01G001072	131007015	rna-XM_057934160.1	2	B129,B139