source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	25164403	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	37	A21,A25,A5,B10,B108,B110,B111,B112,B121,B128,B24,B35,B41,B44,B5,B50,B53,B60,B61,B62,B65,B67,B72,B74,B81,B93,C12,C19,C26,C37,C45,C49,C50,C53,C70,C73,D3
lof_cds	Chr1	25164406	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	B100
typical_cds_rare	Chr1	25164406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	B100
lof_cds	Chr1	25164445	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	C53
typical_cds_rare	Chr1	25164445	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	C53
typical_cds_rare	Chr1	25164478	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	B93
typical_cds_rare	Chr1	25164485	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	4	B104,B24,C85,D10
lof_cds	Chr1	25164501	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	85	A13,A16,A18,A5,A6,B1,B102,B106,B110,B112,B113,B115,B119,B12,B121,B128,B129,B13,B134,B135,B20,B22,B24,B27,B28,B31,B32,B33,B34,B36,B37,B38,B39,B41,B49,B56,B59,B60,B61,B67,B68,B71,B73,B79,B8,B81,B83,B89,B91,B93,B96,C13,C15,C16,C20,C27,C28,C29,C3,C35,C38,C39,C41,C42,C47,C48,C52,C53,C56,C58,C61,C62,C63,C65,C68,C75,C76,C77,C79,C8,C81,C87,D1,D3,D7
typical_cds_rare	Chr1	25164524	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	D10
lof_cds	Chr1	25164565	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	28	A23,B109,B118,B15,B19,B20,B23,B37,B48,B49,B69,B72,B82,B83,B94,B97,B98,C21,C22,C27,C29,C50,C63,C73,C79,C82,C83,D2
typical_cds_rare	Chr1	25164574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	5	B127,B54,C10,C69,D2
typical_cds_rare	Chr1	25164608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	A21
lof_cds	Chr1	25164619	T	TAG	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	8	B133,B139,B15,B24,B84,C41,C77,D5
lof_cds	Chr1	25164620	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	8	B133,B139,B15,B24,B84,C41,C77,D5
lof_cds	Chr1	25164647	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	C64
typical_cds_rare	Chr1	25164647	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	C64
lof_cds	Chr1	25164652	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	12	A19,A20,B109,B44,B51,B64,B69,C17,C42,C59,C76,C87
typical_cds_rare	Chr1	25164654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	3	B133,B15,D5
typical_cds_rare	Chr1	25164674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	3	B41,B59,C84
typical_cds_rare	Chr1	25164675	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	5	A9,B75,C2,C58,D9
typical_cds_rare	Chr1	25164688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	D6
typical_cds_rare	Chr1	25164689	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	5	A7,B43,B44,C12,C59
typical_cds_rare	Chr1	25164702	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	5	A11,A2,B117,B30,B99
typical_cds_rare	Chr1	25164704	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	B21
lof_cds	Chr1	25164707	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	81	A1,A13,A14,A20,A3,A5,B10,B100,B11,B114,B118,B119,B12,B124,B126,B128,B133,B139,B140,B16,B23,B25,B27,B3,B35,B36,B42,B43,B45,B46,B48,B50,B51,B6,B60,B64,B67,B72,B73,B75,B76,B79,B80,B81,B9,B90,B91,B92,B93,B97,C1,C10,C12,C17,C24,C30,C31,C34,C35,C37,C40,C50,C52,C54,C56,C58,C59,C63,C65,C67,C69,C7,C72,C73,C79,C81,C83,C9,D1,D2,D8
lof_cds	Chr1	25164733	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	8	B103,B131,B136,B41,B75,B86,C28,C42
typical_cds_rare	Chr1	25164735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	2	B66,C85
typical_cds_rare	Chr1	25164852	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	2	B42,D11
typical_cds_rare	Chr1	25164862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	4	A2,B101,B117,C40
typical_cds_rare	Chr1	25164884	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	3	B46,B49,C78
typical_cds_rare	Chr1	25164900	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	4	A10,B23,B93,C58
lof_cds	Chr1	25164919	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	D10
typical_cds_rare	Chr1	25164919	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	D10
typical_cds_rare	Chr1	25164922	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	A4
typical_cds_rare	Chr1	25164938	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	4	A21,B19,C35,C40
typical_cds_rare	Chr1	25164952	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	2	A10,B19
typical_cds_rare	Chr1	25164958	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	2	B86,C50
typical_cds_rare	Chr1	25164959	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	4	B21,B61,C3,C74
typical_cds_rare	Chr1	25164961	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	1	D11
lof_cds	Chr1	25164963	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131005042	SmilChr01G001252	131005042	rna-XM_057931840.1	22	A21,B102,B106,B126,B137,B27,B34,B50,B70,B75,B85,B94,B97,C11,C32,C33,C44,C47,C55,C69,C71,D11