source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	25338191	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	3	B30,C13,C76
typical_cds_rare	Chr1	25338193	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	C13,C76
lof_cds	Chr1	25338197	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	39	A18,A23,A25,A3,A7,B101,B108,B109,B115,B13,B135,B137,B23,B25,B29,B34,B37,B40,B47,B5,B54,B55,B58,B62,B75,B76,B8,B80,B94,C1,C31,C38,C42,C55,C60,C67,C75,C87,D8
typical_cds_rare	Chr1	25338208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	D11
typical_cds_rare	Chr1	25338222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	5	B11,B114,B88,C3,D3
lof_cds	Chr1	25338224	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	6	A19,B30,B77,C52,C78,C83
typical_cds_rare	Chr1	25338225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	3	A1,B132,B2
typical_cds_rare	Chr1	25338247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	A1,B2
typical_cds_rare	Chr1	25338250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	A11,C29
typical_cds_rare	Chr1	25338253	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	B107,B98
lof_cds	Chr1	25338260	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	B103,B111,B30,C53
typical_cds_rare	Chr1	25338260	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	B103,B111,B30,C53
typical_cds_rare	Chr1	25338266	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	B63,B83
typical_cds_rare	Chr1	25338279	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	A11,B135,B26,C29
typical_cds_rare	Chr1	25338336	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	B103,B111,B30,C17
typical_cds_rare	Chr1	25338357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	A11,B135,B26,C29
typical_cds_rare	Chr1	25338368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	3	A11,B26,C29
typical_cds_rare	Chr1	25338375	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	A1,B132,B2,C12
typical_cds_rare	Chr1	25338384	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B110
typical_cds_rare	Chr1	25338389	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	3	B34,C30,C35
lof_cds	Chr1	25338401	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	8	B103,B36,B54,C30,C35,C5,C7,C75
lof_cds	Chr1	25338410	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	5	B110,B32,B76,C37,C50
typical_cds_rare	Chr1	25338410	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	5	B110,B32,B76,C37,C50
lof_cds	Chr1	25338411	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	20	A2,B100,B101,B109,B138,B140,B24,B49,B64,B69,B85,C20,C22,C28,C38,C46,C55,C74,C85,D3
lof_cds	Chr1	25338412	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	127	A10,A16,A24,A25,A5,A7,A8,B100,B102,B104,B106,B107,B109,B110,B113,B114,B115,B117,B12,B121,B122,B124,B127,B128,B130,B133,B134,B136,B138,B14,B16,B17,B19,B20,B24,B25,B28,B29,B3,B31,B32,B33,B34,B35,B4,B42,B46,B47,B48,B49,B50,B53,B57,B58,B59,B6,B62,B64,B67,B68,B69,B70,B72,B73,B74,B75,B76,B79,B81,B83,B85,B87,B89,B9,B90,B91,B92,B95,B97,B98,B99,C12,C14,C16,C17,C19,C24,C26,C28,C29,C33,C34,C35,C36,C37,C39,C40,C41,C42,C44,C45,C46,C47,C50,C51,C54,C55,C56,C57,C59,C6,C62,C63,C64,C66,C69,C71,C73,C75,C81,C83,D2,D3,D4,D6,D7,D9
lof_cds	Chr1	25338419	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	124	A1,A10,A11,A15,A18,A19,A24,A3,A4,A8,A9,B1,B10,B103,B106,B110,B112,B113,B117,B118,B119,B121,B122,B124,B125,B133,B135,B139,B140,B15,B16,B17,B19,B2,B21,B25,B26,B27,B29,B30,B37,B38,B4,B40,B46,B49,B55,B56,B58,B6,B60,B64,B65,B66,B69,B7,B71,B72,B73,B74,B75,B77,B82,B84,B86,B87,B88,B9,B90,B92,B93,B94,B95,B96,B99,C11,C13,C15,C16,C19,C20,C21,C22,C27,C28,C30,C31,C32,C33,C34,C36,C38,C39,C4,C40,C42,C45,C48,C49,C5,C52,C54,C55,C59,C65,C66,C67,C68,C69,C71,C73,C74,C75,C76,C77,C78,C8,C80,C83,D1,D11,D4,D6,D9
lof_cds	Chr1	25338427	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	B117,C48
typical_cds_rare	Chr1	25338427	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	B117,C48
lof_cds	Chr1	25338431	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	8	A21,B117,B37,B61,C14,C28,C48,D11
typical_cds_rare	Chr1	25338446	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	B125,B92
typical_cds_rare	Chr1	25338459	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B20
typical_cds_rare	Chr1	25338525	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B60
lof_cds	Chr1	25338533	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	6	B61,B71,C14,C28,C33,D11
typical_cds_rare	Chr1	25338546	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	B61,C28
typical_cds_rare	Chr1	25338553	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B136
typical_cds_rare	Chr1	25338580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B120
lof_cds	Chr1	25338595	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	59	A15,A18,A20,A4,A7,B102,B110,B112,B115,B120,B123,B125,B127,B129,B130,B138,B139,B15,B17,B21,B22,B28,B30,B36,B38,B39,B44,B51,B53,B57,B58,B64,B7,B70,B77,B78,B83,B87,B88,B97,C10,C12,C15,C18,C21,C22,C27,C30,C37,C41,C54,C59,C65,C70,C73,C74,C77,C9,D9
lof_cds	Chr1	25338599	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	17	A21,A3,A6,B100,B11,B117,B119,B123,B126,B131,B24,B31,B33,B89,B94,B99,C45
typical_cds_rare	Chr1	25338600	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B72
lof_cds	Chr1	25338615	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	117	A1,A14,A19,A21,A22,A24,A25,A5,A6,A8,B1,B10,B101,B103,B104,B106,B108,B110,B113,B115,B118,B120,B121,B124,B126,B128,B130,B132,B133,B137,B138,B14,B17,B18,B20,B25,B26,B27,B28,B30,B37,B38,B39,B4,B40,B42,B43,B44,B48,B5,B50,B52,B6,B60,B62,B63,B65,B66,B69,B70,B75,B78,B80,B81,B82,B83,B85,B9,B90,B92,B98,B99,C1,C10,C17,C18,C26,C27,C28,C29,C31,C32,C35,C37,C38,C4,C41,C42,C43,C44,C45,C48,C50,C52,C53,C58,C6,C60,C61,C64,C66,C67,C69,C7,C72,C73,C74,C75,C76,C80,C83,C84,C86,C87,C9,D1,D11
typical_cds_rare	Chr1	25338647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	B16,B18,B60,C69
typical_cds_rare	Chr1	25338678	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	D10
typical_cds_rare	Chr1	25338685	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	3	B128,C17,C61
lof_cds	Chr1	25338712	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	83	A1,A16,A21,A22,A3,A6,A7,A8,A9,B100,B103,B105,B108,B11,B119,B122,B123,B124,B125,B126,B128,B129,B13,B131,B135,B136,B139,B19,B21,B22,B23,B24,B26,B30,B31,B33,B36,B40,B45,B49,B53,B54,B58,B59,B63,B66,B79,B8,B80,B83,B87,B89,B94,B98,B99,C1,C12,C13,C15,C17,C20,C21,C24,C30,C31,C34,C45,C49,C5,C55,C58,C6,C63,C65,C67,C7,C72,C75,C76,C85,D4,D6,D8
typical_cds_rare	Chr1	25338713	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	3	B120,B137,B41
typical_cds_rare	Chr1	25338716	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	A18
typical_cds_rare	Chr1	25338732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	3	B102,B123,C15
typical_cds_rare	Chr1	25338736	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	B110,B139,B32,C50
lof_cds	Chr1	25338747	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	A11,B78
typical_cds_rare	Chr1	25338747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	A11,B78
typical_cds_rare	Chr1	25338757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	A11,B78
typical_cds_rare	Chr1	25338767	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B65
lof_cds	Chr1	25338789	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	13	A22,B105,B107,B24,B36,B66,B83,C13,C16,C23,C59,C71,C85
lof_cds	Chr1	25338790	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	83	A1,A10,A18,A19,A21,A24,A3,A8,A9,B1,B10,B103,B117,B118,B119,B121,B125,B135,B14,B140,B16,B17,B19,B2,B21,B22,B25,B30,B37,B38,B48,B55,B56,B6,B64,B65,B66,B7,B71,B72,B74,B78,B86,B87,B88,B90,B93,B95,B96,C16,C19,C20,C21,C22,C31,C32,C36,C38,C39,C4,C40,C45,C46,C5,C52,C53,C54,C55,C59,C64,C65,C68,C69,C71,C73,C75,C76,C77,C78,C80,C83,D6,D8
lof_cds	Chr1	25338903	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	82	A11,A14,A21,A24,A25,A5,A6,B101,B104,B106,B108,B110,B113,B115,B120,B126,B128,B130,B132,B137,B14,B18,B20,B25,B26,B27,B28,B34,B38,B39,B4,B42,B43,B44,B5,B50,B52,B58,B60,B63,B65,B73,B78,B81,B85,B86,B9,B99,C10,C11,C18,C25,C26,C28,C31,C32,C35,C37,C41,C43,C44,C48,C50,C52,C58,C6,C61,C66,C68,C69,C7,C72,C73,C74,C75,C80,C81,C83,C86,C87,C9,D11
lof_cds	Chr1	25338909	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	96	A11,A14,A2,A24,A25,A5,A6,B101,B104,B106,B108,B109,B110,B113,B115,B120,B126,B128,B129,B13,B130,B132,B137,B138,B14,B140,B18,B20,B24,B25,B26,B27,B28,B33,B34,B35,B38,B39,B4,B42,B43,B44,B49,B5,B50,B52,B58,B60,B63,B64,B65,B73,B78,B80,B81,B85,B9,B99,C10,C11,C18,C20,C25,C26,C28,C31,C32,C35,C37,C41,C43,C44,C46,C48,C50,C52,C58,C6,C60,C61,C66,C68,C69,C7,C72,C73,C74,C75,C80,C81,C85,C86,C87,C9,D11,D3
typical_cds_rare	Chr1	25338919	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	A10,B29,C19,C31
lof_cds	Chr1	25338922	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	20	A2,B109,B129,B13,B138,B140,B24,B44,B49,B64,B74,B80,B9,C20,C28,C46,C60,C74,C85,D3
typical_cds_rare	Chr1	25338928	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B72
typical_cds_rare	Chr1	25338979	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	1	B103
typical_cds_rare	Chr1	25339024	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	5	B61,B74,C3,C5,C74
typical_cds_rare	Chr1	25339038	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	2	B18,C19
lof_cds	Chr1	25339040	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	10	B103,B122,B2,B55,B65,B84,C2,C21,C25,D1
typical_cds_rare	Chr1	25339045	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	5	A18,B138,B44,C74,C85
typical_cds_rare	Chr1	25339062	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005069	SmilChr01G001264	131005069	rna-XM_057931868.1	4	B61,B74,C5,C74