source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	27924922	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	3	B140,B17,C45
typical_cds_rare	Chr1	27924922	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	3	B140,B17,C45
lof_cds	Chr1	27924976	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	6	B135,B25,B83,B84,C3,C54
lof_cds	Chr1	27924993	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	10	A5,B106,B135,B16,B73,C35,C42,C53,C76,D11
typical_cds_rare	Chr1	27924998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B135,B66
typical_cds_rare	Chr1	27925004	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B126
typical_cds_rare	Chr1	27925006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B98,C48
lof_cds	Chr1	27925009	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B108
typical_cds_rare	Chr1	27925009	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B108
typical_cds_rare	Chr1	27925016	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B70,C15,C40,C5
typical_cds_rare	Chr1	27925024	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A25,B20,B39,C60,C69
typical_cds_rare	Chr1	27925025	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	A21
typical_cds_rare	Chr1	27925030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	D5
lof_cds	Chr1	27925043	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B98
typical_cds_rare	Chr1	27925043	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B98
typical_cds_rare	Chr1	27925062	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	C44
typical_cds_rare	Chr1	27925066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	3	B25,B89,D3
typical_cds_rare	Chr1	27925074	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A10,B130,B84,B85,C28
typical_cds_rare	Chr1	27925089	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B101
lof_cds	Chr1	27925099	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	9	A3,A8,B117,B12,B55,B92,C32,C37,C68
typical_cds_rare	Chr1	27925103	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A3,B129,B25,B84,C3
lof_cds	Chr1	27925108	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	8	B102,B86,B9,B93,C13,C15,C38,C5
typical_cds_rare	Chr1	27925116	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B101
lof_cds	Chr1	27925119	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	9	A3,B129,B130,B25,B57,B84,C3,C44,C54
typical_cds_rare	Chr1	27925142	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B111,C29
lof_cds	Chr1	27925167	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	10	B128,B20,B38,B39,C1,C11,C31,C60,C69,C78
typical_cds_rare	Chr1	27925180	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	D10
typical_cds_rare	Chr1	27925205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B30,B46,B96,C17
lof_cds	Chr1	27925211	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	8	A1,B14,B72,B99,C13,C58,C82,D10
lof_cds	Chr1	27925214	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	8	A1,B14,B72,B99,C13,C58,C82,D10
typical_cds_rare	Chr1	27925216	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B111,B50,B73,C29
lof_cds	Chr1	27925230	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	29	A5,A9,B1,B104,B111,B114,B120,B126,B133,B136,B29,B31,B45,B58,B62,B63,B64,B71,B81,B87,C11,C27,C39,C69,C75,C76,C81,C86,D7
lof_cds	Chr1	27925233	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	29	A5,A9,B1,B104,B111,B114,B120,B126,B133,B136,B29,B31,B45,B58,B62,B63,B64,B71,B81,B87,C11,C27,C39,C69,C75,C76,C81,C86,D7
typical_cds_rare	Chr1	27925237	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B3,B83,C59,C70
lof_cds	Chr1	27925243	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	6	B136,B36,B63,B72,B98,C42
typical_cds_rare	Chr1	27925253	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	D10
typical_cds_rare	Chr1	27925266	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B110
typical_cds_rare	Chr1	27925270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B58,B64,B87,C63
typical_cds_rare	Chr1	27925290	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	A25,C72
typical_cds_rare	Chr1	27925305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B30,C3
typical_cds_rare	Chr1	27925308	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B119,B136,B4,B72
typical_cds_rare	Chr1	27925315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	A13,B67,B9,C30
typical_cds_rare	Chr1	27925321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	3	B96,C2,C32
typical_cds_rare	Chr1	27925330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	3	A18,B111,C2
typical_cds_rare	Chr1	27925346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	B22,B41,B61,C20,C85
lof_cds	Chr1	27925445	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	78	A11,A13,A15,A16,A22,A24,A25,A3,A6,B104,B105,B108,B119,B121,B122,B125,B126,B128,B130,B133,B22,B23,B26,B27,B30,B33,B35,B36,B47,B49,B50,B58,B59,B6,B62,B69,B7,B70,B72,B78,B84,B90,B91,B92,B98,B99,C12,C17,C21,C23,C24,C29,C3,C30,C31,C33,C34,C35,C37,C43,C47,C48,C49,C51,C55,C56,C61,C63,C64,C71,C73,C74,C77,C8,C87,C9,D3,D5
lof_cds	Chr1	27925446	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	45	A11,A13,A22,A24,A25,A3,B104,B121,B125,B130,B133,B30,B33,B35,B36,B47,B49,B58,B59,B62,B7,B70,B72,B78,B90,B92,B99,C12,C15,C21,C24,C29,C3,C30,C31,C37,C47,C48,C49,C51,C61,C71,C74,C77,C87
lof_cds	Chr1	27925456	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	36	A15,A16,A6,B105,B108,B119,B122,B128,B22,B23,B26,B27,B33,B47,B50,B6,B62,B69,B84,B91,C17,C23,C33,C34,C35,C43,C47,C55,C56,C63,C64,C71,C8,C9,D3,D5
typical_cds_rare	Chr1	27925483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B77,C23
lof_cds	Chr1	27925510	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	28	A24,A3,B103,B104,B121,B130,B30,B33,B35,B36,B47,B61,B70,B78,B92,C21,C24,C29,C3,C30,C31,C38,C47,C61,C71,C74,C77,C87
typical_cds_rare	Chr1	27925545	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B115,B51,B52,C31
typical_cds_rare	Chr1	27925546	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B106,C76
lof_cds	Chr1	27925549	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	72	A11,A13,A20,A22,A5,A6,A7,B103,B105,B106,B11,B113,B119,B121,B124,B129,B13,B137,B138,B139,B17,B19,B21,B24,B26,B27,B28,B36,B39,B4,B40,B48,B5,B52,B56,B6,B62,B66,B7,B71,B75,B76,B78,B83,B85,B89,B97,B99,C17,C2,C21,C24,C25,C27,C30,C31,C49,C50,C52,C53,C57,C59,C6,C62,C67,C73,C75,C77,C78,C8,C81,D4
typical_cds_rare	Chr1	27925572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B1,B7
typical_cds_rare	Chr1	27925574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	4	B104,B115,B51,C31
typical_cds_rare	Chr1	27925577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B126,B135
lof_cds	Chr1	27925588	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A5,B95,C33,C38,C61
typical_cds_rare	Chr1	27925588	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A5,B95,C33,C38,C61
lof_cds	Chr1	27925590	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A5,B95,C33,C38,C61
typical_cds_rare	Chr1	27925590	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A5,B95,C33,C38,C61
typical_cds_rare	Chr1	27925605	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	2	B16,D6
typical_cds_rare	Chr1	27925610	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	5	A8,B11,B12,B90,B92
typical_cds_rare	Chr1	27925696	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	C83
typical_cds_rare	Chr1	27925725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005500	SmilChr01G001429	131005500	rna-XM_057932507.1	1	B129