source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	28179563	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	A13,B105,B114,B84,C42
typical_cds_rare	Chr1	28179593	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
typical_cds_rare	Chr1	28179624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D11
lof_cds	Chr1	28179656	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	A11,B104,C48,D3
typical_cds_rare	Chr1	28179656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	A11,B104,C48,D3
lof_cds	Chr1	28179680	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	6	B13,B15,B37,C27,C58,C76
typical_cds_rare	Chr1	28179695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	B114,B35,B84,D5
typical_cds_rare	Chr1	28179709	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	B105,B123,B6,B87,C67
typical_cds_rare	Chr1	28179714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B114,C56
lof_cds	Chr1	28179733	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	39	A10,A18,A2,B100,B104,B108,B117,B118,B138,B17,B2,B21,B25,B30,B36,B37,B4,B42,B45,B54,B62,B64,B8,B81,B85,C13,C23,C33,C37,C38,C43,C44,C50,C69,C71,C80,C83,D3,D4
lof_cds	Chr1	28179736	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	35	A14,A15,B118,B119,B120,B129,B131,B134,B136,B27,B29,B41,B47,B61,B83,B97,C1,C17,C23,C30,C33,C39,C4,C43,C46,C47,C50,C51,C64,C65,C66,C74,C79,C84,C9
lof_cds	Chr1	28179742	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	22	B1,B10,B115,B124,B126,B135,B136,B138,B22,B23,B61,B7,B73,B85,C11,C25,C45,C54,C68,C69,C83,D2
typical_cds_rare	Chr1	28179744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B114,B5,C44
typical_cds_rare	Chr1	28179749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B107,B114
lof_cds	Chr1	28179755	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	A2,B15
typical_cds_rare	Chr1	28179755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	A2,B15
typical_cds_rare	Chr1	28179756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	B114,B5,C16,C44
typical_cds_rare	Chr1	28179813	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D10
typical_cds_rare	Chr1	28179822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	C16
typical_cds_rare	Chr1	28179827	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B30
typical_cds_rare	Chr1	28179840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	B118,B5,B84,C16,C44
typical_cds_rare	Chr1	28179842	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	B122,B132,B99,C39
typical_cds_rare	Chr1	28179854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B104
typical_cds_rare	Chr1	28179868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	A21,C25,C85,D11
lof_cds	Chr1	28179894	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	6	B108,B51,B72,C55,C77,C83
lof_cds	Chr1	28179896	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	7	B108,B51,B72,C55,C77,C83,D7
typical_cds_rare	Chr1	28179903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B100,C47
typical_cds_rare	Chr1	28179914	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B113,B88,C17
typical_cds_rare	Chr1	28179936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B104
typical_cds_rare	Chr1	28179947	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	C17
typical_cds_rare	Chr1	28179959	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D11
typical_cds_rare	Chr1	28180006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B100,C47
typical_cds_rare	Chr1	28180014	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	C75,D1
typical_cds_rare	Chr1	28180020	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	C26,C33,C46,C87
typical_cds_rare	Chr1	28180024	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
lof_cds	Chr1	28180033	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	13	A3,A7,B12,B121,B135,B24,B31,B46,B57,B66,C26,C49,C80
lof_cds	Chr1	28180188	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	24	A3,B107,B110,B112,B117,B122,B134,B137,B25,B37,B63,B65,B68,B71,B8,B88,C22,C32,C42,C45,C61,C62,C68,D1
typical_cds_rare	Chr1	28180191	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	B51,B72,C48,C55,C77
lof_cds	Chr1	28180195	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B84
typical_cds_rare	Chr1	28180195	G	GGC	INDEL	2bp_insertion	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B84
typical_cds_rare	Chr1	28180206	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B56,B96,C8
typical_cds_rare	Chr1	28180227	ATC	*	INDEL	2bp_deletion	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	C25
typical_cds_rare	Chr1	28180238	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D10
typical_cds_rare	Chr1	28180239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B104
typical_cds_rare	Chr1	28180247	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B140
lof_cds	Chr1	28180253	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	66	A1,A13,A18,A19,A20,A21,A3,A5,A8,B104,B105,B107,B114,B115,B118,B119,B123,B126,B127,B131,B135,B137,B23,B24,B32,B35,B49,B5,B51,B52,B53,B56,B57,B6,B60,B62,B63,B69,B72,B79,B81,B84,B87,B93,B96,B97,C1,C16,C20,C24,C3,C33,C35,C39,C42,C44,C67,C70,C72,C80,C83,C86,D11,D5,D7,D9
lof_cds	Chr1	28180254	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	49	A18,A19,A21,A3,A5,A8,B104,B107,B114,B115,B118,B119,B123,B126,B135,B137,B23,B32,B49,B5,B51,B52,B56,B57,B6,B60,B62,B63,B69,B72,B79,B96,B97,C1,C20,C24,C3,C33,C35,C42,C44,C67,C72,C80,C83,C86,D11,D5,D9
lof_cds	Chr1	28180277	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	10	A15,B103,B106,B48,B55,B56,B69,B96,C7,C70
typical_cds_rare	Chr1	28180290	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B84
typical_cds_rare	Chr1	28180314	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B82
typical_cds_rare	Chr1	28180348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D8
lof_cds	Chr1	28180367	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	8	A21,A25,B113,B28,B51,C18,C3,C86
typical_cds_rare	Chr1	28180374	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D11
typical_cds_rare	Chr1	28180383	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B2
lof_cds	Chr1	28180414	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	13	A20,B107,B127,B67,B69,C16,C2,C33,C34,C39,C46,C54,C8
typical_cds_rare	Chr1	28180418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A11,A16,C16
typical_cds_rare	Chr1	28180424	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	B125,B30,B40,C38,D6
typical_cds_rare	Chr1	28180443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	B102,B49,B91,C42,C61
typical_cds_rare	Chr1	28180457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	C60
lof_cds	Chr1	28180461	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B114,B6,B75
typical_cds_rare	Chr1	28180461	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B114,B6,B75
typical_cds_rare	Chr1	28180484	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	B54,C26,C33,C46,C87
typical_cds_rare	Chr1	28180490	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D11
typical_cds_rare	Chr1	28180497	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	B120,B137,C37,D3
lof_cds	Chr1	28180514	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	25	A1,A15,A23,A24,B121,B129,B16,B18,B3,B33,B42,B43,B70,B74,B86,B88,B89,C15,C18,C20,C3,C55,C69,C71,C80
typical_cds_rare	Chr1	28180516	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A1,A23,C55
lof_cds	Chr1	28180534	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B65
typical_cds_rare	Chr1	28180534	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B65
typical_cds_rare	Chr1	28180537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B50,B66,B84
lof_cds	Chr1	28180550	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	42	A1,A11,A13,A23,B108,B112,B117,B118,B123,B124,B125,B131,B138,B140,B50,B51,B54,B55,B62,B67,B75,B78,B9,B99,C11,C23,C26,C29,C35,C4,C40,C44,C48,C49,C63,C67,C69,C76,C80,C83,C84,D3
lof_cds	Chr1	28180555	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	8	A16,B18,B32,B73,B81,C30,C42,C70
lof_cds	Chr1	28180559	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	26	A18,A21,B107,B127,B131,B135,B23,B24,B32,B37,B46,B53,B67,B69,B80,C16,C2,C33,C34,C39,C46,C54,C79,C8,D10,D11
typical_cds_rare	Chr1	28180572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B50,B66,B84
typical_cds_rare	Chr1	28180574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B30
typical_cds_rare	Chr1	28180578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
typical_cds_rare	Chr1	28180584	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	C48
typical_cds_rare	Chr1	28180593	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	A2
typical_cds_rare	Chr1	28180608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
typical_cds_rare	Chr1	28180618	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	D11
lof_cds	Chr1	28180621	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B56,B96,C8
typical_cds_rare	Chr1	28180621	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B56,B96,C8
typical_cds_rare	Chr1	28180622	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
lof_cds	Chr1	28180628	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	47	A13,A14,A6,A9,B105,B121,B123,B125,B136,B19,B22,B24,B28,B32,B40,B46,B49,B50,B53,B60,B7,B74,B77,B79,B85,B87,B9,B94,B97,B99,C10,C11,C19,C28,C37,C40,C41,C43,C53,C63,C67,C79,C86,C9,D3,D6,D9
typical_cds_rare	Chr1	28180638	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	A10,B130
typical_cds_rare	Chr1	28180660	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B101,C46
typical_cds_rare	Chr1	28180702	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	A11,A16,B30,C16
typical_cds_rare	Chr1	28180704	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	B47,B51,B56,B96,C51
typical_cds_rare	Chr1	28180707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B104
typical_cds_rare	Chr1	28180712	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	A2
typical_cds_rare	Chr1	28180714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B122,C56,C60
lof_cds	Chr1	28180734	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	11	A5,A8,B126,B127,B131,B137,B80,C1,C72,C85,D8
typical_cds_rare	Chr1	28180740	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
typical_cds_rare	Chr1	28180742	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	A21,B13,B66,C25,C85
typical_cds_rare	Chr1	28180767	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	A8,B126,B137,B80,C85
typical_cds_rare	Chr1	28180772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B68,B80,D5
typical_cds_rare	Chr1	28180791	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	A18,B36,B37,B64
typical_cds_rare	Chr1	28180803	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B104,D11
typical_cds_rare	Chr1	28180813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	A21,C25
typical_cds_rare	Chr1	28180832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A11,A16,C16
lof_cds	Chr1	28180838	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	10	B1,B13,B29,B68,B80,C15,C22,C57,C75,D5
lof_cds	Chr1	28180844	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	44	A15,A19,A23,A9,B10,B101,B108,B11,B111,B117,B118,B119,B129,B135,B14,B16,B18,B31,B33,B50,B55,B58,B60,B66,B70,B74,B81,B86,B88,C11,C15,C20,C32,C4,C40,C5,C55,C64,C66,C68,C69,C71,C80,D4
typical_cds_rare	Chr1	28180847	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B73,B81
typical_cds_rare	Chr1	28180851	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B115,D5
lof_cds	Chr1	28180873	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	11	A10,B100,B133,B42,B43,C13,C34,C38,C58,C81,D1
typical_cds_rare	Chr1	28180875	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	A10
typical_cds_rare	Chr1	28180877	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	C56,C60
typical_cds_rare	Chr1	28180900	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
typical_cds_rare	Chr1	28180904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B4,D10
lof_cds	Chr1	28180921	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	244	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B105,B106,B107,B108,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B132,B133,B134,B135,B136,B137,B138,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B65,B66,B67,B68,B69,B7,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C32,C33,C34,C35,C36,C37,C38,C39,C4,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D7,D8,D9
lof_cds	Chr1	28180938	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	20	A20,B107,B127,B24,B37,B53,B67,B69,C16,C2,C27,C33,C34,C39,C46,C54,C79,C8,D10,D11
typical_cds_rare	Chr1	28180939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
typical_cds_rare	Chr1	28180958	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B100,C47
typical_cds_rare	Chr1	28180962	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B102,B20
typical_cds_rare	Chr1	28180993	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B56,B96
typical_cds_rare	Chr1	28180997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	C10
typical_cds_rare	Chr1	28181003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	A21,B13,B66,C85,D11
lof_cds	Chr1	28181017	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B32
typical_cds_rare	Chr1	28181017	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B32
typical_cds_rare	Chr1	28181019	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	C56,C60
typical_cds_rare	Chr1	28181038	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	B120,B137,C37,D3
lof_cds	Chr1	28181106	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	188	A1,A10,A11,A13,A14,A15,A18,A2,A21,A23,A25,A3,A4,A5,A6,A7,A8,A9,B100,B101,B103,B104,B105,B106,B107,B108,B11,B110,B111,B112,B113,B114,B117,B118,B119,B12,B120,B121,B122,B123,B125,B127,B128,B129,B130,B131,B132,B133,B134,B137,B14,B140,B15,B17,B2,B20,B21,B22,B24,B26,B28,B3,B30,B31,B32,B33,B35,B36,B37,B38,B39,B40,B41,B42,B43,B45,B46,B47,B49,B50,B51,B52,B53,B54,B55,B56,B57,B6,B60,B62,B66,B67,B69,B7,B72,B75,B76,B77,B78,B79,B8,B82,B83,B84,B85,B87,B88,B89,B9,B90,B91,B92,B93,B95,B96,B97,B98,B99,C1,C10,C12,C13,C14,C16,C17,C19,C2,C20,C21,C23,C25,C26,C28,C29,C3,C32,C33,C34,C35,C36,C37,C39,C4,C40,C41,C42,C43,C44,C46,C48,C49,C5,C50,C51,C52,C53,C55,C58,C6,C60,C61,C63,C64,C65,C66,C67,C7,C70,C71,C73,C74,C76,C77,C78,C8,C80,C81,C82,C84,C86,C87,C9,D1,D10,D3,D4,D8,D9
lof_cds	Chr1	28181107	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	24	A20,B107,B127,B131,B24,B37,B53,B67,B69,B72,C16,C2,C27,C33,C34,C39,C46,C48,C54,C55,C56,C79,C83,D10
typical_cds_rare	Chr1	28181126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A2,B103,B128
typical_cds_rare	Chr1	28181127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	4	A2,B103,B128,B66
lof_cds	Chr1	28181144	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	221	A1,A10,A11,A14,A15,A19,A2,A21,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B103,B104,B105,B106,B107,B108,B11,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B14,B140,B15,B17,B18,B19,B2,B20,B21,B22,B23,B24,B26,B27,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B40,B41,B42,B43,B45,B46,B47,B48,B50,B51,B52,B54,B55,B56,B57,B6,B60,B61,B62,B66,B67,B68,B69,B7,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C32,C33,C34,C35,C36,C37,C39,C4,C40,C41,C42,C43,C45,C46,C47,C48,C49,C5,C50,C51,C53,C55,C57,C58,C6,C60,C61,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C73,C74,C75,C76,C77,C78,C8,C80,C81,C82,C83,C84,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D8,D9
typical_cds_rare	Chr1	28181149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B130,B2
typical_cds_rare	Chr1	28181150	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	B126,B96,C39
typical_cds_rare	Chr1	28181170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	A3,B46
typical_cds_rare	Chr1	28181187	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A16,B29,D11
lof_cds	Chr1	28181189	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	11	B126,B13,B68,B80,B86,B89,C15,C22,C57,C75,D5
lof_cds	Chr1	28181262	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	8	B103,B106,B48,B55,B69,B96,C7,C70
typical_cds_rare	Chr1	28181287	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	5	A3,A4,C18,C47,D7
lof_cds	Chr1	28181290	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	7	B11,B130,B57,B88,B95,C51,C77
typical_cds_rare	Chr1	28181305	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B82,D5
typical_cds_rare	Chr1	28181306	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A1,B79,B81
typical_cds_rare	Chr1	28181315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B120,B87
typical_cds_rare	Chr1	28181324	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B120,B87
typical_cds_rare	Chr1	28181342	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A11,A16,C16
typical_cds_rare	Chr1	28181351	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	2	B62,B79
typical_cds_rare	Chr1	28181353	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B2
typical_cds_rare	Chr1	28181363	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	3	A11,A16,C16
lof_cds	Chr1	28181391	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	38	A1,A13,A19,A3,B105,B106,B114,B115,B118,B119,B12,B126,B131,B16,B23,B35,B49,B51,B52,B53,B62,B72,B79,B81,B84,B87,C12,C24,C39,C42,C56,C70,C80,C83,C86,D1,D5,D9
typical_cds_rare	Chr1	28181393	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	1	B94
lof_cds	Chr1	28181397	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131005584	SmilChr01G001448	131005584	rna-XM_057932595.1	41	A1,A13,A19,A3,B105,B106,B111,B114,B115,B118,B119,B12,B126,B131,B16,B23,B35,B49,B51,B52,B53,B60,B62,B72,B79,B81,B84,B87,C12,C24,C39,C42,C56,C70,C80,C83,C85,C86,D1,D5,D9