source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	28455653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	B120
lof_cds	Chr1	28455659	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	5	B107,B119,B29,B85,C51
typical_cds_rare	Chr1	28455659	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	5	B107,B119,B29,B85,C51
typical_cds_rare	Chr1	28455693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	3	B108,B77,C23
typical_cds_rare	Chr1	28455725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	B105
typical_cds_rare	Chr1	28455796	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	2	C13,C71
lof_cds	Chr1	28455797	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	4	B42,B43,B90,B92
typical_cds_rare	Chr1	28455797	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	4	B42,B43,B90,B92
lof_cds	Chr1	28455818	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	73	A15,A23,A6,A7,A8,B10,B100,B101,B102,B108,B11,B111,B113,B115,B124,B128,B13,B132,B134,B137,B14,B20,B23,B24,B26,B29,B3,B30,B33,B34,B38,B41,B49,B5,B53,B58,B6,B64,B7,B74,B75,B76,B78,B79,B8,B81,B87,C12,C15,C18,C25,C32,C38,C4,C47,C48,C49,C5,C55,C58,C68,C70,C72,C73,C75,C76,C78,C86,D2,D3,D5,D8,D9
lof_cds	Chr1	28455914	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C82
typical_cds_rare	Chr1	28455914	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C82
lof_cds	Chr1	28455929	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	55	A1,A24,A5,A6,B10,B102,B11,B117,B119,B128,B129,B132,B18,B2,B21,B22,B27,B30,B4,B49,B51,B53,B55,B57,B59,B6,B63,B65,B83,B88,B94,B96,B97,C1,C10,C12,C13,C19,C35,C39,C4,C50,C51,C55,C56,C66,C67,C78,C82,C83,C84,C85,D3,D4,D9
lof_cds	Chr1	28455938	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	D7
typical_cds_rare	Chr1	28455938	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	D7
typical_cds_rare	Chr1	28455953	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	3	C14,C64,C66
typical_cds_rare	Chr1	28455978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	B108
typical_cds_rare	Chr1	28455992	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	D10
lof_cds	Chr1	28455994	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	86	A10,A14,A16,A18,A2,A4,A5,A7,A9,B101,B103,B108,B111,B113,B114,B115,B12,B122,B123,B126,B132,B133,B134,B135,B138,B139,B140,B16,B18,B20,B23,B26,B34,B35,B4,B40,B42,B43,B44,B45,B46,B48,B54,B56,B62,B66,B71,B74,B78,B84,B85,B90,B92,B96,C16,C19,C2,C21,C27,C30,C32,C34,C39,C40,C41,C43,C45,C46,C5,C53,C56,C57,C58,C60,C62,C64,C66,C68,C7,C72,C73,C79,C80,C81,D5,D6
lof_cds	Chr1	28456001	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	2	B107,B130
typical_cds_rare	Chr1	28456001	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	2	B107,B130
typical_cds_rare	Chr1	28456005	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	B108
lof_cds	Chr1	28456027	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	4	A22,C34,C37,C63
typical_cds_rare	Chr1	28456027	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	4	A22,C34,C37,C63
typical_cds_rare	Chr1	28456041	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	4	A19,B108,C78,D3
typical_cds_rare	Chr1	28456074	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	2	C13,C71
typical_cds_rare	Chr1	28456083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	4	B28,B41,B51,B66
typical_cds_rare	Chr1	28456093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C23
typical_cds_rare	Chr1	28456100	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	2	B93,D3
typical_cds_rare	Chr1	28456122	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C23
lof_cds	Chr1	28456140	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C82
typical_cds_rare	Chr1	28456140	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C82
typical_cds_rare	Chr1	28456143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C82
typical_cds_rare	Chr1	28456273	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	2	B95,C44
typical_cds_rare	Chr1	28456279	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	3	B56,B68,C33
typical_cds_rare	Chr1	28456337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	1	C44
typical_cds_rare	Chr1	28456435	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	3	B71,C21,C63
typical_cds_rare	Chr1	28456590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005644	SmilChr01G001466	131005644	rna-XM_057932653.1	4	A13,B11,C86,C87
