source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	28485981	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	C60,C77
typical_cds_rare	Chr1	28485981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	C60,C77
typical_cds_rare	Chr1	28485999	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	A3
typical_cds_rare	Chr1	28486001	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	A15,B40,B69,C77,C86
typical_cds_rare	Chr1	28486131	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C71
lof_cds	Chr1	28486137	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	C16,C50,C87
typical_cds_rare	Chr1	28486137	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	C16,C50,C87
typical_cds_rare	Chr1	28486160	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B134
typical_cds_rare	Chr1	28486162	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	B128,B57,B98,C15
typical_cds_rare	Chr1	28486171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	A1,B6,C11,C42,C84
lof_cds	Chr1	28486179	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	A7,A8
typical_cds_rare	Chr1	28486179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	A7,A8
typical_cds_rare	Chr1	28486196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	B56,B96
typical_cds_rare	Chr1	28486205	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C2
typical_cds_rare	Chr1	28486206	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	D9
typical_cds_rare	Chr1	28486211	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	D11
lof_cds	Chr1	28486244	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	A20,B99,C61,C68
typical_cds_rare	Chr1	28486244	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	A20,B99,C61,C68
lof_cds	Chr1	28486248	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	B109,B54,B60,B70,D11
typical_cds_rare	Chr1	28486248	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	B109,B54,B60,B70,D11
typical_cds_rare	Chr1	28486252	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B53
typical_cds_rare	Chr1	28486255	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	A5,C56
typical_cds_rare	Chr1	28486260	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	B34,C68
typical_cds_rare	Chr1	28486323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	B28,B73,C33,C55,C59
typical_cds_rare	Chr1	28486348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C29
lof_cds	Chr1	28486351	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B65
typical_cds_rare	Chr1	28486351	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B65
typical_cds_rare	Chr1	28486604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C15
typical_cds_rare	Chr1	28486607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	B66,C10,C40,C48,D4
typical_cds_rare	Chr1	28486655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B73
typical_cds_rare	Chr1	28486744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C77
lof_cds	Chr1	28486759	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	A16,B10,B28,C52
typical_cds_rare	Chr1	28486759	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	A16,B10,B28,C52
lof_cds	Chr1	28486780	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	A13,C34,C40,C74
typical_cds_rare	Chr1	28486780	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	A13,C34,C40,C74
typical_cds_rare	Chr1	28486832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B131
typical_cds_rare	Chr1	28486913	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	C23,C43,C64,C74
lof_cds	Chr1	28486940	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C74
typical_cds_rare	Chr1	28486940	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C74
typical_cds_rare	Chr1	28487061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C18
typical_cds_rare	Chr1	28487075	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	C40,C51
typical_cds_rare	Chr1	28487093	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	B40,B53,B75,C20,C28
typical_cds_rare	Chr1	28487127	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	C35,C63,D4
typical_cds_rare	Chr1	28487128	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	A13,B109
lof_cds	Chr1	28487133	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C28
typical_cds_rare	Chr1	28487133	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C28
typical_cds_rare	Chr1	28487138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	C66
typical_cds_rare	Chr1	28487139	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	B131,B75,B82,C8
lof_cds	Chr1	28487145	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	A10,B17,B75
typical_cds_rare	Chr1	28487145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	A10,B17,B75
typical_cds_rare	Chr1	28487154	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	A22,D3
typical_cds_rare	Chr1	28487163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B17
lof_cds	Chr1	28487193	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	13	A1,A2,A20,B103,B104,B18,B40,B65,B92,B95,C56,C6,C64
typical_cds_rare	Chr1	28487204	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	A20,B65,B95
lof_cds	Chr1	28487207	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	27	A3,A4,B10,B113,B12,B17,B28,B47,B52,B69,B73,B76,B90,B91,B93,C12,C29,C34,C41,C49,C57,C58,C64,C68,C7,C70,C81
typical_cds_rare	Chr1	28487230	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	C17,C35,C59
lof_cds	Chr1	28487234	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	B140,B77,C30,D3
typical_cds_rare	Chr1	28487234	A	AGT	INDEL	2bp_insertion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	B140,B77,C30,D3
typical_cds_rare	Chr1	28487244	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B128
lof_cds	Chr1	28487251	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	B111,B48,B65,C64,C76
typical_cds_rare	Chr1	28487251	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	B111,B48,B65,C64,C76
typical_cds_rare	Chr1	28487270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	A16,B140,B77,C30,D3
typical_cds_rare	Chr1	28487315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	B101,C81,D11
lof_cds	Chr1	28487346	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	6	A1,B41,C10,C38,C74,C87
typical_cds_rare	Chr1	28487347	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	B117,B123,C22,C82
lof_cds	Chr1	28487378	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	B46,C23
typical_cds_rare	Chr1	28487378	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	B46,C23
typical_cds_rare	Chr1	28487394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	B1,B108,B13,B33
typical_cds_rare	Chr1	28487408	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	4	B35,B5,B57,C71
typical_cds_rare	Chr1	28487439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B41
lof_cds	Chr1	28487447	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	A10,B103,B24,B59,C58
typical_cds_rare	Chr1	28487447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	A10,B103,B24,B59,C58
typical_cds_rare	Chr1	28487451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B104
typical_cds_rare	Chr1	28487452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B21
typical_cds_rare	Chr1	28487455	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	3	B118,B20,C8
lof_cds	Chr1	28487458	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	B99,D1
typical_cds_rare	Chr1	28487458	C	CGT	INDEL	2bp_insertion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	2	B99,D1
lof_cds	Chr1	28487459	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B23
typical_cds_rare	Chr1	28487459	C	CAG	INDEL	2bp_insertion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B23
lof_cds	Chr1	28487461	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B23
typical_cds_rare	Chr1	28487461	CTA	C	INDEL	2bp_deletion	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	1	B23
typical_cds_rare	Chr1	28487469	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	5	A13,B121,B34,B47,B86
lof_cds	Chr1	28487470	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	29	A22,A7,B1,B103,B105,B106,B108,B13,B20,B30,B48,B53,B61,B69,B72,B82,C29,C31,C33,C36,C39,C45,C51,C63,C65,C67,C69,C70,D5
lof_cds	Chr1	28487475	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131018381	SmilChr01G001471	131018381	rna-XM_057947111.1	32	A13,A22,A7,B1,B103,B105,B106,B108,B121,B13,B20,B30,B48,B53,B61,B69,B72,B82,C11,C29,C31,C33,C36,C39,C45,C51,C63,C65,C67,C69,C70,D5