source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	28492480	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	C26,C39,C57
typical_cds_rare	Chr1	28492492	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B57,C59
typical_cds_rare	Chr1	28492500	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B120,B130,C29,C59
typical_cds_rare	Chr1	28492515	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B136,B72,C68,C78
typical_cds_rare	Chr1	28492523	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	A16,B1,B36
typical_cds_rare	Chr1	28492562	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B11,B38,B75,C16
typical_cds_rare	Chr1	28492599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	A11,B36,B42,B6,B7
typical_cds_rare	Chr1	28492605	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	B138,B71,B96,C19,D11
typical_cds_rare	Chr1	28492629	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B35,B52,C1,D4
lof_cds	Chr1	28492672	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	C67
typical_cds_rare	Chr1	28492672	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	C67
typical_cds_rare	Chr1	28492676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	A11,B36
typical_cds_rare	Chr1	28492683	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B121
lof_cds	Chr1	28492684	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B113,B121
typical_cds_rare	Chr1	28492684	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B113,B121
lof_cds	Chr1	28492716	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B119,B84,D7
typical_cds_rare	Chr1	28492716	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B119,B84,D7
typical_cds_rare	Chr1	28492741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	A19,B132,B140,B98
typical_cds_rare	Chr1	28492759	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	B11,B28,B5,C40,C51
typical_cds_rare	Chr1	28492764	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	C14,D11
lof_cds	Chr1	28492772	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	50	A11,A14,A16,A23,A8,B101,B102,B106,B110,B112,B115,B118,B135,B136,B138,B139,B15,B31,B32,B36,B45,B47,B5,B56,B60,B64,B67,B70,B80,B83,B84,B96,B98,C24,C30,C32,C34,C37,C40,C44,C47,C5,C51,C55,C59,C66,C72,C84,D2,D6
typical_cds_rare	Chr1	28492783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B23,B46,C10
typical_cds_rare	Chr1	28492813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B44
typical_cds_rare	Chr1	28492828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	A11,B131,C17
typical_cds_rare	Chr1	28492830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	A13,C1
typical_cds_rare	Chr1	28492835	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	A23,B57,B86,C23,C68
typical_cds_rare	Chr1	28492854	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B104
lof_cds	Chr1	28492856	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	9	B1,B104,B67,B75,B88,B93,B97,C2,D11
typical_cds_rare	Chr1	28492862	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B19,B4,C12
typical_cds_rare	Chr1	28492868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B41,C79
lof_cds	Chr1	28492916	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	16	A2,B110,B13,B33,B37,B38,B39,B55,B70,B78,B82,C12,C31,C75,C78,D1
lof_cds	Chr1	28492929	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	9	B108,B125,B42,B43,B56,B58,B60,B74,C24
typical_cds_rare	Chr1	28492938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B100,B47,B54,C81
typical_cds_rare	Chr1	28492943	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B118,B41,C79
typical_cds_rare	Chr1	28492992	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B118,B124,B130,B47
lof_cds	Chr1	28493025	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B139,B15,B57
typical_cds_rare	Chr1	28493025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B139,B15,B57
typical_cds_rare	Chr1	28493030	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	B131,B29,B43,C2,C56
typical_cds_rare	Chr1	28493055	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	A2,B112,B14,B29,C47
lof_cds	Chr1	28493090	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	10	A16,B10,B124,B139,B36,C47,C58,C67,C68,D2
lof_cds	Chr1	28493112	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	25	A4,B113,B121,B136,B139,B24,B29,B31,B32,B43,B56,B75,B90,B94,C21,C24,C26,C33,C4,C41,C43,C71,C79,C85,D7
typical_cds_rare	Chr1	28493115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B136,B82,C55
typical_cds_rare	Chr1	28493117	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B36,B90,C29
typical_cds_rare	Chr1	28493124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B136,B20,C21,C33
typical_cds_rare	Chr1	28493166	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B120,C24
lof_cds	Chr1	28493181	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	15	B11,B21,B36,B50,B51,B78,B90,C15,C29,C30,C45,C69,C9,D5,D9
lof_cds	Chr1	28493191	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	B106,B21,B5,C16,C32
typical_cds_rare	Chr1	28493191	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	B106,B21,B5,C16,C32
typical_cds_rare	Chr1	28493213	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B114,B80,C81
typical_cds_rare	Chr1	28493219	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B20,B28,C33,C76
lof_cds	Chr1	28493243	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	39	A10,A14,A23,A24,A5,A9,B103,B15,B24,B28,B35,B49,B66,B75,B78,B83,B90,B95,B98,B99,C1,C10,C11,C16,C2,C30,C41,C43,C46,C50,C54,C65,C67,C68,C79,C8,C80,C86,D3
typical_cds_rare	Chr1	28493270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B60,B87
typical_cds_rare	Chr1	28493274	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B131,C56
typical_cds_rare	Chr1	28493276	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B55,B60,B69,C61
typical_cds_rare	Chr1	28493277	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	A25,B114,C37
typical_cds_rare	Chr1	28493312	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	C68
lof_cds	Chr1	28493336	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B104,C71
typical_cds_rare	Chr1	28493336	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B104,C71
typical_cds_rare	Chr1	28493349	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	A9,B91
lof_cds	Chr1	28493366	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	C17,C3
typical_cds_rare	Chr1	28493366	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	C17,C3
typical_cds_rare	Chr1	28493393	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	A14,B112,B31,C20,C74
lof_cds	Chr1	28493438	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B104
typical_cds_rare	Chr1	28493438	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B104
typical_cds_rare	Chr1	28493447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	B114,B81,C7
typical_cds_rare	Chr1	28493458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B101,B50,B9,C3
typical_cds_rare	Chr1	28493469	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	4	B131,B42,C56,D9
lof_cds	Chr1	28493471	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	23	A15,A16,A9,B111,B114,B115,B138,B25,B28,B39,B40,B53,B83,B88,B95,C12,C14,C19,C33,C40,C73,C9,D3
typical_cds_rare	Chr1	28493484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	5	B12,B2,B28,C73,D5
typical_cds_rare	Chr1	28493519	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B135,C41
typical_cds_rare	Chr1	28493551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B133
typical_cds_rare	Chr1	28493563	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B94
lof_cds	Chr1	28493568	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	11	A3,B135,B139,B27,B65,B7,B74,C21,C81,C86,D2
typical_cds_rare	Chr1	28493579	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B115,B33
typical_cds_rare	Chr1	28493583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B134,B76
typical_cds_rare	Chr1	28493599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	A14
lof_cds	Chr1	28493606	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	13	A3,B131,B135,B139,B27,B65,B7,B74,C21,C81,C82,C86,D2
lof_cds	Chr1	28493628	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	7	A3,B135,B139,B27,B74,C21,D2
typical_cds_rare	Chr1	28493643	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	3	A14,B122,C7
typical_cds_rare	Chr1	28493661	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	D11
lof_cds	Chr1	28493663	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	6	B22,B41,B91,C15,C25,D2
typical_cds_rare	Chr1	28493693	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B67
typical_cds_rare	Chr1	28493700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B123,B74
typical_cds_rare	Chr1	28493732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B3,B83
typical_cds_rare	Chr1	28493736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	B74
typical_cds_rare	Chr1	28493739	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B4,C25
typical_cds_rare	Chr1	28493756	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	C82
typical_cds_rare	Chr1	28493757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B47,B63
typical_cds_rare	Chr1	28493783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	2	B103,B39
typical_cds_rare	Chr1	28493818	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	D3
typical_cds_rare	Chr1	28493825	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	1	D3
lof_cds	Chr1	28493828	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131005672	SmilChr01G001473	131005672	rna-XM_057932704.1	6	B57,B73,B82,B98,C15,C36