source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	28891092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	5	B140,B8,C36,C82,C85
lof_cds	Chr1	28891115	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	74	A10,A24,A5,A7,B103,B104,B108,B110,B114,B115,B120,B126,B128,B132,B135,B138,B139,B140,B15,B19,B21,B24,B33,B36,B38,B40,B5,B50,B52,B62,B70,B72,B77,B78,B8,B84,B85,B88,B89,B91,B95,B96,B99,C12,C13,C23,C24,C28,C3,C32,C36,C39,C43,C45,C46,C47,C50,C54,C58,C59,C6,C63,C66,C67,C68,C73,C76,C79,C80,C82,C85,C87,D4,D9
typical_cds_rare	Chr1	28891445	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B104,C83
typical_cds_rare	Chr1	28891451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	D9
lof_cds	Chr1	28891458	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C1,C52
typical_cds_rare	Chr1	28891458	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C1,C52
lof_cds	Chr1	28891466	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	77	A1,A10,A19,A22,A23,A5,B101,B102,B105,B11,B112,B114,B120,B129,B13,B132,B134,B15,B20,B22,B23,B26,B28,B29,B31,B4,B40,B47,B50,B56,B6,B63,B65,B66,B71,B72,B74,B75,B76,B77,B78,B80,B81,B89,B91,B93,B94,B95,B96,B99,C1,C10,C12,C13,C14,C25,C28,C29,C38,C39,C40,C43,C46,C47,C49,C55,C57,C58,C62,C68,C7,C71,C79,C83,C9,D10,D5
lof_cds	Chr1	28891469	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	33	A24,A6,B103,B110,B118,B119,B13,B137,B15,B59,B61,B62,B65,B76,B8,C16,C21,C31,C32,C35,C37,C5,C68,C70,C71,C73,C75,C81,C86,D1,D3,D7,D9
typical_cds_rare	Chr1	28891485	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C55
typical_cds_rare	Chr1	28891503	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C1,C52
typical_cds_rare	Chr1	28891552	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B107,B37,B63
typical_cds_rare	Chr1	28891573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	B104
lof_cds	Chr1	28891581	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	29	A20,A3,A9,B109,B111,B121,B131,B18,B20,B23,B25,B45,B46,B48,B61,B74,C18,C2,C30,C34,C38,C45,C61,C64,C66,C7,C70,D5,D8
typical_cds_rare	Chr1	28891584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	C35,C44,D1
typical_cds_rare	Chr1	28891589	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	D7
lof_cds	Chr1	28891597	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C1,C52
typical_cds_rare	Chr1	28891597	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C1,C52
typical_cds_rare	Chr1	28891601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C65
lof_cds	Chr1	28891626	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	37	A10,A11,A22,A4,A7,B1,B10,B105,B11,B111,B125,B130,B16,B17,B41,B48,B54,B60,B7,B71,B88,B89,B92,B97,B98,C11,C19,C31,C36,C4,C41,C42,C48,C80,C84,C87,D8
typical_cds_rare	Chr1	28891628	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C49,D5
lof_cds	Chr1	28891635	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	43	A1,A16,A7,B103,B108,B124,B128,B129,B137,B138,B139,B19,B2,B21,B27,B3,B30,B32,B36,B38,B39,B6,B68,B85,B90,C17,C20,C30,C35,C50,C54,C56,C59,C60,C63,C66,C67,C68,C73,C79,C81,C87,D4
lof_cds	Chr1	28891905	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C8
typical_cds_rare	Chr1	28891905	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C8
typical_cds_rare	Chr1	28891908	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	5	A10,B77,C1,C52,D10
lof_cds	Chr1	28891947	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	11	A11,B1,B12,B131,B138,B40,B66,B78,C17,C2,C21
typical_cds_rare	Chr1	28891951	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	D7
typical_cds_rare	Chr1	28891967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	5	B126,B134,B87,C15,D9
typical_cds_rare	Chr1	28892306	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B107,B37,B63
typical_cds_rare	Chr1	28892336	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C60
typical_cds_rare	Chr1	28892353	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B68,C50
lof_cds	Chr1	28892354	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	27	A24,A6,B103,B110,B119,B137,B15,B59,B61,B62,B65,B76,B8,C16,C21,C31,C37,C5,C70,C71,C73,C75,C77,C86,D1,D3,D7
lof_cds	Chr1	28892375	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B107,B37,B63
typical_cds_rare	Chr1	28892375	CTA	C	INDEL	2bp_deletion	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B107,B37,B63
typical_cds_rare	Chr1	28892383	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C25
typical_cds_rare	Chr1	28892443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B37,B63
lof_cds	Chr1	28892459	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	40	A13,A21,B100,B104,B106,B107,B113,B117,B119,B120,B122,B132,B139,B140,B24,B28,B33,B38,B39,B45,B52,B55,B68,B70,B73,B82,B84,B95,C34,C36,C42,C54,C63,C76,C77,C78,C8,C82,C85,D4
typical_cds_rare	Chr1	28892471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	D1
lof_cds	Chr1	28892502	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	6	B126,B134,B87,C15,C65,D9
lof_cds	Chr1	28892525	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B107,B37,B63
typical_cds_rare	Chr1	28892525	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B107,B37,B63
typical_cds_rare	Chr1	28892526	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	5	B110,B112,B126,B88,C22
lof_cds	Chr1	28892546	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	C26,C33,C46
typical_cds_rare	Chr1	28892546	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	C26,C33,C46
typical_cds_rare	Chr1	28892568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	A10,B42,B77
typical_cds_rare	Chr1	28892589	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	A10,B77
typical_cds_rare	Chr1	28892640	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C18
typical_cds_rare	Chr1	28892665	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B83,D11
lof_cds	Chr1	28892710	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	51	A10,A19,A2,A25,A9,B10,B100,B102,B108,B118,B125,B128,B17,B21,B22,B3,B30,B33,B41,B43,B44,B48,B53,B57,B60,B64,B69,B73,B75,B84,B92,B97,B98,C11,C13,C18,C23,C24,C29,C3,C31,C37,C41,C48,C53,C55,C69,C84,D10,D2,D7
typical_cds_rare	Chr1	28892728	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C3
typical_cds_rare	Chr1	28892729	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B30,B41
typical_cds_rare	Chr1	28892737	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C55
typical_cds_rare	Chr1	28892738	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B83,D11
typical_cds_rare	Chr1	28892739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B126,C65
typical_cds_rare	Chr1	28892743	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B107,B63
lof_cds	Chr1	28892750	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	35	A11,A23,A24,A6,B1,B115,B118,B12,B127,B131,B137,B138,B40,B61,B62,B63,B64,B65,B66,B76,B78,B93,C17,C2,C21,C22,C31,C5,C70,C71,C74,C77,D11,D3,D7
typical_cds_rare	Chr1	28892753	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	5	B138,B32,B66,B78,B93
typical_cds_rare	Chr1	28892773	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	5	A23,B127,B67,C22,C74
typical_cds_rare	Chr1	28892776	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	B87
typical_cds_rare	Chr1	28892817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	4	B3,B86,C15,C80
lof_cds	Chr1	28892826	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	4	A11,B131,B40,B66
typical_cds_rare	Chr1	28892826	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	4	A11,B131,B40,B66
typical_cds_rare	Chr1	28892918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	4	B106,B120,C34,C76
typical_cds_rare	Chr1	28892928	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B134,C15
typical_cds_rare	Chr1	28892951	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C34
typical_cds_rare	Chr1	28892984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B134,C15,C66
typical_cds_rare	Chr1	28893011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B126,B134,C15
typical_cds_rare	Chr1	28893019	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	B138
typical_cds_rare	Chr1	28893020	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	D1
typical_cds_rare	Chr1	28893061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B132,B89,C28
lof_cds	Chr1	28893137	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C1,C52
typical_cds_rare	Chr1	28893137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	C1,C52
typical_cds_rare	Chr1	28893159	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	D1
typical_cds_rare	Chr1	28893175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	4	B61,B65,C21,C31
typical_cds_rare	Chr1	28893179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	C49
lof_cds	Chr1	28893209	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B126,C65
typical_cds_rare	Chr1	28893209	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B126,C65
typical_cds_rare	Chr1	28893396	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	1	D11
typical_cds_rare	Chr1	28893419	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	4	A7,B107,B37,B63
typical_cds_rare	Chr1	28893482	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	4	B56,B95,B99,C49
typical_cds_rare	Chr1	28893510	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	3	B122,B55,B59
lof_cds	Chr1	28893515	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B100,B47
typical_cds_rare	Chr1	28893515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B100,B47
typical_cds_rare	Chr1	28893524	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005779	SmilChr01G001506	131005779	rna-XM_057932864.1	2	B71,D7