source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	29596496	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	5	A10,A21,B41,D11,D4
lof_cds	Chr1	29596511	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	C49
typical_cds_rare	Chr1	29596511	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	C49
lof_cds	Chr1	29596517	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	C18
typical_cds_rare	Chr1	29596517	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	C18
lof_cds	Chr1	29596534	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	7	B112,B38,B39,B41,B93,C84,D5
typical_cds_rare	Chr1	29596557	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	C74
typical_cds_rare	Chr1	29596567	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B7
lof_cds	Chr1	29596594	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B104
typical_cds_rare	Chr1	29596594	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B104
typical_cds_rare	Chr1	29596612	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	5	B110,B121,B37,C48,C67
typical_cds_rare	Chr1	29596622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B36,C36
typical_cds_rare	Chr1	29596632	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	D1
typical_cds_rare	Chr1	29596655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B22,B85
lof_cds	Chr1	29596726	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	36	A1,A13,A23,A3,A7,B101,B122,B124,B130,B14,B140,B24,B25,B60,B69,B74,B8,B86,B89,C14,C18,C28,C35,C41,C42,C47,C50,C54,C61,C64,C66,C70,C80,C82,D10,D2
lof_cds	Chr1	29596738	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	36	A1,A13,A23,A3,A7,B101,B122,B124,B130,B14,B140,B24,B25,B60,B69,B74,B8,B86,B89,C14,C18,C28,C35,C41,C42,C47,C50,C54,C61,C64,C66,C70,C80,C82,D10,D2
lof_cds	Chr1	29596744	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	4	B126,C50,C52,C6
typical_cds_rare	Chr1	29596744	G	GGC	INDEL	2bp_insertion	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	4	B126,C50,C52,C6
typical_cds_rare	Chr1	29596749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B58,D1
lof_cds	Chr1	29596789	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	24	A11,B107,B109,B117,B119,B14,B19,B25,B34,B53,B58,B65,B88,B99,C19,C21,C25,C30,C36,C40,C62,C72,C8,C84
lof_cds	Chr1	29596792	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	26	A11,A4,B107,B109,B117,B119,B14,B19,B25,B34,B53,B58,B65,B88,B99,C19,C21,C25,C30,C36,C39,C40,C62,C72,C8,C84
typical_cds_rare	Chr1	29596831	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	B3,B7,C74
lof_cds	Chr1	29596848	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B87
typical_cds_rare	Chr1	29596848	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B87
typical_cds_rare	Chr1	29596859	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	A10,C17,D6
typical_cds_rare	Chr1	29596888	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	5	B36,B4,B91,C36,C60
typical_cds_rare	Chr1	29597055	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	B36,B51,C36
typical_cds_rare	Chr1	29597084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B104,B83
typical_cds_rare	Chr1	29597127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B72
typical_cds_rare	Chr1	29597132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	B15,C19,C74
typical_cds_rare	Chr1	29597148	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	A25,C54,C56
typical_cds_rare	Chr1	29597163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B83
typical_cds_rare	Chr1	29597241	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	5	A1,B136,B62,B8,C26
typical_cds_rare	Chr1	29597243	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B105
lof_cds	Chr1	29597267	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	89	A10,A14,A15,A20,A22,A24,A25,A3,A4,A5,A8,A9,B1,B10,B104,B108,B112,B118,B123,B130,B134,B135,B136,B140,B17,B18,B19,B21,B22,B30,B36,B41,B42,B47,B50,B51,B52,B53,B56,B58,B61,B62,B7,B76,B77,B79,B84,B91,B92,B94,B98,B99,C1,C11,C15,C16,C18,C21,C26,C33,C38,C4,C43,C44,C46,C47,C48,C49,C51,C54,C56,C57,C59,C6,C61,C62,C63,C65,C67,C68,C73,C79,C81,C84,D3,D4,D7,D8,D9
typical_cds_rare	Chr1	29597322	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	C15,C25,C74
typical_cds_rare	Chr1	29597546	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	B123,B92,C56
typical_cds_rare	Chr1	29597553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	4	B100,B47,B62,C35
lof_cds	Chr1	29597555	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	27	A24,B100,B101,B104,B109,B113,B134,B26,B28,B41,B5,B71,B74,B80,C15,C16,C2,C24,C38,C40,C50,C56,C66,C72,C73,C83,D8
typical_cds_rare	Chr1	29597568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	C25,C74
lof_cds	Chr1	29597569	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	A4
typical_cds_rare	Chr1	29597569	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	A4
lof_cds	Chr1	29597570	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	40	A11,A16,A9,B1,B104,B109,B111,B117,B2,B22,B3,B33,B37,B49,B56,B57,B60,B62,B65,B73,B76,B86,B98,C11,C15,C21,C24,C26,C29,C3,C36,C46,C61,C69,C7,C72,C74,C75,C8,C83
lof_cds	Chr1	29597572	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	19	A16,B131,B134,B136,B140,B23,B43,B48,B53,B58,B63,B86,B99,C44,C52,C6,C62,C71,C72
typical_cds_rare	Chr1	29597615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	A16,B131,C18
typical_cds_rare	Chr1	29597627	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	4	A4,B71,C32,C61
lof_cds	Chr1	29597630	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	50	A16,A3,A4,B102,B114,B115,B119,B120,B121,B124,B127,B131,B134,B137,B140,B2,B23,B35,B43,B48,B53,B56,B63,B70,B72,B80,B86,B92,B99,C13,C14,C23,C29,C34,C36,C43,C44,C45,C47,C53,C6,C62,C66,C71,C72,C81,D11,D4,D5,D8
lof_cds	Chr1	29597646	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	77	A1,A11,A13,A16,A5,A8,A9,B1,B109,B111,B117,B121,B132,B138,B140,B15,B16,B2,B21,B22,B24,B3,B30,B32,B35,B37,B38,B39,B49,B53,B56,B57,B6,B60,B62,B65,B73,B74,B76,B8,B86,B87,B88,B89,B96,B98,B99,C11,C15,C19,C21,C24,C26,C27,C28,C3,C31,C34,C38,C41,C45,C46,C5,C55,C61,C62,C65,C69,C7,C72,C73,C75,C8,C80,C82,C83,C85
lof_cds	Chr1	29597672	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	44	A1,A13,A21,A23,A3,A7,B11,B122,B130,B131,B138,B14,B140,B24,B25,B3,B38,B39,B60,B67,B69,B72,B74,B8,B86,B89,C14,C15,C18,C28,C29,C35,C41,C42,C47,C61,C65,C66,C70,C80,C82,C85,D10,D2
typical_cds_rare	Chr1	29597688	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	4	B36,B4,C36,C60
lof_cds	Chr1	29597815	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	5	B28,B40,B41,C28,D6
typical_cds_rare	Chr1	29597815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	5	B28,B40,B41,C28,D6
typical_cds_rare	Chr1	29597838	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	4	B36,B4,C36,C60
typical_cds_rare	Chr1	29597856	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	C2
typical_cds_rare	Chr1	29597898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	C1,C52
typical_cds_rare	Chr1	29597958	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	3	A18,B26,C25
lof_cds	Chr1	29597967	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B7
typical_cds_rare	Chr1	29597967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B7
typical_cds_rare	Chr1	29598023	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B122,D10
typical_cds_rare	Chr1	29598039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	5	B68,C32,C48,C68,C86
typical_cds_rare	Chr1	29598042	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B47
lof_cds	Chr1	29598051	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	49	A1,A13,A21,A23,A3,A7,B101,B11,B122,B124,B130,B131,B138,B14,B140,B24,B25,B3,B38,B39,B60,B67,B69,B72,B74,B8,B86,B89,C14,C15,C18,C28,C29,C35,C41,C42,C47,C50,C54,C61,C64,C65,C66,C70,C80,C82,C85,D10,D2
typical_cds_rare	Chr1	29598146	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	A18,B26
typical_cds_rare	Chr1	29598152	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B47,D7
typical_cds_rare	Chr1	29598156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B46,B63
typical_cds_rare	Chr1	29598168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B104
lof_cds	Chr1	29598240	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	86	A1,A2,A20,A3,A4,A8,B10,B105,B106,B107,B109,B112,B113,B115,B120,B122,B127,B131,B133,B139,B15,B16,B17,B18,B19,B20,B21,B23,B25,B28,B30,B31,B35,B36,B4,B44,B49,B50,B54,B55,B56,B59,B6,B67,B68,B75,B80,B83,B85,B88,B89,B9,B91,B94,B95,B99,C1,C11,C18,C19,C22,C27,C31,C33,C34,C35,C37,C38,C4,C42,C43,C46,C47,C48,C50,C51,C52,C55,C61,C68,C69,C73,C79,D10,D7,D8
typical_cds_rare	Chr1	29598241	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B17,B67
typical_cds_rare	Chr1	29598247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	4	B100,B17,B82,C85
typical_cds_rare	Chr1	29598257	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	1	B104
lof_cds	Chr1	29598286	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	137	A11,A13,A14,A15,A20,A22,A23,A24,A3,A4,A5,A6,A7,A8,A9,B10,B100,B108,B111,B112,B113,B115,B117,B118,B127,B129,B130,B134,B135,B136,B137,B138,B139,B17,B18,B19,B21,B22,B26,B27,B29,B30,B32,B33,B35,B36,B38,B39,B41,B42,B43,B44,B47,B49,B50,B51,B52,B53,B54,B56,B58,B6,B60,B61,B62,B64,B67,B7,B70,B76,B77,B78,B79,B80,B81,B84,B85,B88,B89,B9,B91,B94,B96,B97,B98,B99,C11,C12,C13,C15,C16,C18,C20,C21,C22,C23,C24,C26,C27,C3,C33,C35,C37,C38,C4,C40,C44,C46,C49,C5,C50,C51,C55,C57,C59,C6,C61,C62,C63,C65,C67,C69,C70,C71,C73,C77,C78,C79,C8,C80,C81,C84,D3,D4,D7,D8,D9
lof_cds	Chr1	29598314	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B112,C19
typical_cds_rare	Chr1	29598314	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131005972	SmilChr01G001558	131005972	rna-XM_057933114.1	2	B112,C19