source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	30008979	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	9	A13,A9,B108,B115,B127,B133,B95,C11,C74
lof_cds	Chr1	30008981	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	7	A20,A4,A5,B115,B26,B61,C45
typical_cds_rare	Chr1	30009003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B67
typical_cds_rare	Chr1	30009004	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	B115,B125,B38,C56,C64
lof_cds	Chr1	30009009	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	B106,B67,C71,D2
typical_cds_rare	Chr1	30009009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	B106,B67,C71,D2
lof_cds	Chr1	30009024	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	C5,D1,D6
typical_cds_rare	Chr1	30009024	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	C5,D1,D6
typical_cds_rare	Chr1	30009027	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	B132,B17,C45,C70,C74
typical_cds_rare	Chr1	30009036	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	A20,B102,B29,B58,B79
typical_cds_rare	Chr1	30009042	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B96
typical_cds_rare	Chr1	30009043	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	2	B107,B88
typical_cds_rare	Chr1	30009060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B41,B53,B8
lof_cds	Chr1	30009063	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	6	B28,B3,B30,B31,B89,C27
typical_cds_rare	Chr1	30009065	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	2	B14,B82
lof_cds	Chr1	30009071	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B2
typical_cds_rare	Chr1	30009071	GTA	G	INDEL	2bp_deletion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B2
typical_cds_rare	Chr1	30009075	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B3,B58,C24
typical_cds_rare	Chr1	30009089	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	D1
typical_cds_rare	Chr1	30009090	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B129,B133,C15
typical_cds_rare	Chr1	30009093	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	A3,B70,B99,C15,D1
typical_cds_rare	Chr1	30009104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	A20,A24,C3
typical_cds_rare	Chr1	30009137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	C11,C60,C69,C74
lof_cds	Chr1	30009143	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B51,B52,C12
typical_cds_rare	Chr1	30009143	CTA	C	INDEL	2bp_deletion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B51,B52,C12
typical_cds_rare	Chr1	30009149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	B131,B14,B36,B82,B86
typical_cds_rare	Chr1	30009173	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	A20,A24,C3,C74
lof_cds	Chr1	30009183	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	B106,B28,C45,C70,C78
typical_cds_rare	Chr1	30009183	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	B106,B28,C45,C70,C78
typical_cds_rare	Chr1	30009186	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	C14,C57,D2,D5
typical_cds_rare	Chr1	30009250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	B106,B28,C45,C70,C78
typical_cds_rare	Chr1	30009269	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	B100,B41,B89,B93
typical_cds_rare	Chr1	30009283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	A20,B16,B92
lof_cds	Chr1	30009284	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B114,C23,C47
typical_cds_rare	Chr1	30009284	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B114,C23,C47
lof_cds	Chr1	30009287	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B114,C23,C47
typical_cds_rare	Chr1	30009287	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B114,C23,C47
typical_cds_rare	Chr1	30009298	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B117,B79,C34
typical_cds_rare	Chr1	30009322	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	B11,B123,C10,C71
typical_cds_rare	Chr1	30009350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	2	C50,C77
typical_cds_rare	Chr1	30009359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	2	B2,C19
lof_cds	Chr1	30009374	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	6	B3,B31,B58,C24,C64,C66
typical_cds_rare	Chr1	30009636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	A21,B109,B18,B23,C54
typical_cds_rare	Chr1	30009657	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	C80
typical_cds_rare	Chr1	30009665	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	C78
typical_cds_rare	Chr1	30009675	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	C65
typical_cds_rare	Chr1	30009684	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B16
typical_cds_rare	Chr1	30009686	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	A11,B70,C41,D10
typical_cds_rare	Chr1	30009687	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B16
typical_cds_rare	Chr1	30009688	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	A20
typical_cds_rare	Chr1	30009689	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B114,B136,C70
typical_cds_rare	Chr1	30009705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	B58,C24,C64,C66
typical_cds_rare	Chr1	30009734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B38
typical_cds_rare	Chr1	30009736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B102
typical_cds_rare	Chr1	30009806	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	5	B65,B89,C5,D1,D6
lof_cds	Chr1	30009818	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	C3,C6,C68
typical_cds_rare	Chr1	30009818	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	C3,C6,C68
lof_cds	Chr1	30009828	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	B22,C29,C72,C87
typical_cds_rare	Chr1	30009828	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	4	B22,C29,C72,C87
lof_cds	Chr1	30009867	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	22	A9,B100,B117,B126,B129,B131,B22,B38,B57,B68,B75,B88,C38,C42,C7,C71,C72,C82,C86,C87,D10,D5
lof_cds	Chr1	30009875	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	13	B117,B126,B131,B22,B38,B57,B68,C38,C7,C71,C82,D10,D5
lof_cds	Chr1	30009888	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	13	B117,B126,B131,B22,B38,B57,B68,C38,C7,C71,C82,D10,D5
lof_cds	Chr1	30009890	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	13	B117,B126,B131,B22,B38,B57,B68,C38,C7,C71,C82,D10,D5
lof_cds	Chr1	30009894	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	12	B117,B126,B131,B22,B38,B57,C38,C7,C71,C82,D10,D5
lof_cds	Chr1	30009898	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	8	B117,B126,B22,B57,B68,C7,D10,D5
lof_cds	Chr1	30009903	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	8	B117,B126,B22,B57,B68,C7,D10,D5
lof_cds	Chr1	30009915	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	6	B126,B22,B57,B68,D10,D5
lof_cds	Chr1	30009922	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	6	B126,B22,B57,B68,D10,D5
typical_cds_rare	Chr1	30009928	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B22
lof_cds	Chr1	30009938	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	6	B126,B22,B57,B68,D10,D5
lof_cds	Chr1	30009943	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	6	B126,B22,B57,B68,D10,D5
lof_cds	Chr1	30009946	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	6	B126,B22,B57,B68,D10,D5
lof_cds	Chr1	30009988	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B126
typical_cds_rare	Chr1	30009988	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B126
typical_cds_rare	Chr1	30009995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	1	B126
typical_cds_rare	Chr1	30010047	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	3	B33,B98,C32
typical_cds_rare	Chr1	30010153	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006021	SmilChr01G001594	131006021	rna-XM_057933178.1	2	B23,C87