source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	30538815	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	15	B106,B118,B12,B128,B135,B137,B14,B33,B40,B57,B70,B72,B81,C60,C87
typical_cds_rare	Chr1	30538874	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B2
typical_cds_rare	Chr1	30538906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B123
typical_cds_rare	Chr1	30538973	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	2	C81,C86
typical_cds_rare	Chr1	30538978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	A11
lof_cds	Chr1	30538991	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B104
typical_cds_rare	Chr1	30538991	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B104
typical_cds_rare	Chr1	30539089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B2
lof_cds	Chr1	30539120	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	19	A14,B103,B105,B112,B131,B19,B22,B26,B33,C13,C15,C31,C34,C48,C52,C57,C69,C84,D3
lof_cds	Chr1	30539128	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	7	B101,B108,B136,B140,B32,C54,C63
typical_cds_rare	Chr1	30539132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	D11
typical_cds_rare	Chr1	30539149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B2
lof_cds	Chr1	30539201	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	77	A10,A23,A5,A6,B10,B101,B105,B106,B108,B11,B110,B117,B119,B121,B122,B129,B131,B136,B140,B15,B25,B26,B28,B33,B37,B41,B44,B45,B46,B5,B56,B6,B65,B7,B70,B72,B73,B77,B83,B84,B90,B93,C10,C15,C17,C2,C21,C22,C24,C27,C30,C31,C35,C36,C37,C40,C46,C49,C51,C53,C54,C55,C57,C59,C6,C63,C65,C67,C68,C70,C72,C76,C80,C84,D3,D7,D9
typical_cds_rare	Chr1	30539294	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	C9
typical_cds_rare	Chr1	30539300	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	5	B30,B46,B94,C30,D10
typical_cds_rare	Chr1	30539305	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	4	A14,B103,B21,B33
lof_cds	Chr1	30539339	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B121
typical_cds_rare	Chr1	30539339	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B121
typical_cds_rare	Chr1	30539360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	A11
typical_cds_rare	Chr1	30539363	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	D11
typical_cds_rare	Chr1	30539400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	3	A21,B33,C77
typical_cds_rare	Chr1	30539412	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	4	C20,C31,C6,C9
lof_cds	Chr1	30539415	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	6	B46,B94,C30,C49,D10,D7
typical_cds_rare	Chr1	30539440	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B2
typical_cds_rare	Chr1	30539464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	4	C71,C9,D10,D3
typical_cds_rare	Chr1	30539471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	C85
typical_cds_rare	Chr1	30539472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	C32
typical_cds_rare	Chr1	30539483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	C23
typical_cds_rare	Chr1	30539515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B104
typical_cds_rare	Chr1	30539518	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B23
lof_cds	Chr1	30539540	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	D7
typical_cds_rare	Chr1	30539540	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	D7
typical_cds_rare	Chr1	30539581	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	A11
lof_cds	Chr1	30539651	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	35	A10,A25,A6,B100,B110,B119,B122,B129,B130,B133,B15,B29,B38,B39,B41,B45,B5,B51,B58,B70,B73,B83,B84,C22,C44,C51,C53,C59,C63,C67,C70,C72,C76,C77,D9
lof_cds	Chr1	30539662	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	3	C71,C77,D3
typical_cds_rare	Chr1	30539662	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	3	C71,C77,D3
lof_cds	Chr1	30539816	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	11	A25,B130,B138,B34,B5,B71,B9,C44,C57,C64,C72
typical_cds_rare	Chr1	30539869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B59
lof_cds	Chr1	30539928	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	61	A14,A15,A18,A19,A21,A24,A5,A8,B10,B100,B105,B107,B109,B11,B117,B119,B124,B13,B131,B133,B135,B137,B139,B18,B24,B26,B3,B44,B46,B48,B49,B5,B50,B54,B61,B64,B69,B7,B72,B85,B89,B90,B99,C19,C21,C23,C24,C27,C28,C38,C42,C43,C44,C50,C6,C71,C77,C79,D10,D3,D7
typical_cds_rare	Chr1	30539936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	2	B69,C60
typical_cds_rare	Chr1	30539946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B104
lof_cds	Chr1	30540019	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	123	A1,A19,A20,A21,A23,A3,A6,A7,A8,A9,B1,B101,B103,B106,B107,B109,B111,B113,B114,B117,B118,B119,B121,B122,B126,B131,B133,B134,B137,B139,B16,B18,B19,B2,B22,B23,B24,B25,B26,B28,B29,B3,B30,B32,B4,B40,B47,B48,B49,B5,B50,B6,B60,B66,B69,B70,B72,B74,B75,B77,B78,B8,B80,B82,B85,B88,B91,B95,B97,B99,C10,C12,C17,C19,C21,C22,C23,C24,C25,C28,C3,C30,C31,C32,C34,C35,C36,C42,C44,C45,C46,C47,C48,C5,C51,C53,C54,C56,C57,C59,C60,C63,C65,C66,C67,C68,C70,C71,C72,C73,C78,C79,C8,C80,C82,C83,C84,D1,D10,D2,D5,D7,D8
lof_cds	Chr1	30540079	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B2
typical_cds_rare	Chr1	30540079	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B2
lof_cds	Chr1	30540084	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B31
typical_cds_rare	Chr1	30540084	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131006122	SmilChr01G001648	131006122	rna-XM_057933281.1	1	B31