source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	31973360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	B31,B89,B90,C80
typical_cds_rare	Chr1	31973370	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	B31,B89,B90,C80
typical_cds_rare	Chr1	31973397	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B123
typical_cds_rare	Chr1	31973399	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	C66
typical_cds_rare	Chr1	31973443	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B102
typical_cds_rare	Chr1	31973470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B50
lof_cds	Chr1	31973478	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	A9,B125
typical_cds_rare	Chr1	31973478	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	A9,B125
lof_cds	Chr1	31973493	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	81	A1,A10,A14,A15,A18,A20,A23,A25,A4,A5,A6,B100,B110,B118,B126,B128,B129,B131,B135,B136,B138,B139,B140,B19,B25,B33,B4,B40,B41,B44,B47,B49,B52,B59,B69,B7,B72,B75,B77,B79,B86,B88,B9,B90,B91,B92,B94,B98,B99,C12,C14,C18,C19,C21,C25,C29,C33,C34,C36,C39,C40,C42,C43,C46,C48,C56,C60,C61,C64,C68,C71,C75,C77,C8,C80,C83,C85,D10,D5,D6,D8
typical_cds_rare	Chr1	31973508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	B103,B119
lof_cds	Chr1	31973635	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	10	A14,A15,B13,B35,B40,B92,B98,C17,C38,C86
typical_cds_rare	Chr1	31973668	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	C58
typical_cds_rare	Chr1	31973670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	C58
typical_cds_rare	Chr1	31973672	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B122,C80,C85
typical_cds_rare	Chr1	31973695	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B123
typical_cds_rare	Chr1	31973699	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	B27,B79
lof_cds	Chr1	31973700	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	55	A1,A5,B108,B112,B118,B12,B125,B126,B129,B134,B138,B14,B15,B16,B18,B27,B30,B34,B38,B4,B48,B50,B51,B57,B63,B69,B72,C11,C17,C18,C20,C22,C23,C26,C28,C29,C31,C34,C40,C46,C47,C48,C5,C50,C54,C59,C7,C72,C73,C75,C78,C82,C84,D1,D2
typical_cds_rare	Chr1	31973701	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	C47,C7
typical_cds_rare	Chr1	31973710	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	D11
typical_cds_rare	Chr1	31973722	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B102,B104,D11
typical_cds_rare	Chr1	31973730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B102,B104,D11
typical_cds_rare	Chr1	31973794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	B90,B92,C21,D10
typical_cds_rare	Chr1	31973820	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	B1,C85
typical_cds_rare	Chr1	31973825	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	D11
lof_cds	Chr1	31973846	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	C48
typical_cds_rare	Chr1	31973846	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	C48
typical_cds_rare	Chr1	31973866	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B90,B92,C21
typical_cds_rare	Chr1	31973880	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	D10
typical_cds_rare	Chr1	31973881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	B133,B28
typical_cds_rare	Chr1	31973889	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B44
typical_cds_rare	Chr1	31973896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B41
typical_cds_rare	Chr1	31974307	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B112
typical_cds_rare	Chr1	31974331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	A9,B63,C74,C84
typical_cds_rare	Chr1	31974333	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B135,B86,D6
typical_cds_rare	Chr1	31974348	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	A10,B11,B99,C37
lof_cds	Chr1	31974370	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B122,B94,C85
typical_cds_rare	Chr1	31974370	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B122,B94,C85
typical_cds_rare	Chr1	31974377	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B31,B50,C86
lof_cds	Chr1	31974558	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	D4
typical_cds_rare	Chr1	31974558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	D4
lof_cds	Chr1	31974603	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	120	A10,A14,A15,A16,A19,A2,A20,A22,A24,A25,A6,A8,B10,B100,B101,B103,B106,B117,B119,B125,B126,B128,B131,B133,B134,B135,B137,B140,B15,B16,B18,B19,B2,B21,B26,B28,B29,B3,B34,B35,B36,B38,B39,B40,B41,B45,B46,B48,B5,B51,B52,B55,B57,B58,B6,B61,B62,B63,B66,B67,B69,B71,B73,B74,B75,B76,B78,B83,B84,B86,B87,B89,B91,B93,B94,B97,B99,C1,C10,C13,C14,C15,C16,C2,C20,C27,C28,C29,C3,C30,C31,C32,C33,C35,C44,C46,C47,C49,C5,C54,C55,C57,C58,C60,C62,C63,C65,C67,C68,C70,C71,C75,C76,C78,C8,C80,C82,C84,D11,D6
lof_cds	Chr1	31974607	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B26,B41,C5
typical_cds_rare	Chr1	31974607	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B26,B41,C5
typical_cds_rare	Chr1	31974751	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	B110,B86
typical_cds_rare	Chr1	31974769	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	5	A11,B124,C32,C68,C86
typical_cds_rare	Chr1	31974788	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	D10
lof_cds	Chr1	31974791	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	14	A10,A22,A24,B108,B128,B135,B29,B5,B71,C30,C58,C62,C78,C82
typical_cds_rare	Chr1	31974804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B135,B85,C64
typical_cds_rare	Chr1	31974806	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	B104,B118,C23
typical_cds_rare	Chr1	31974865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	B110,B138
lof_cds	Chr1	31974866	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	222	A1,A10,A11,A13,A14,A16,A18,A2,A20,A22,A23,A24,A25,A4,A5,A7,A8,A9,B1,B10,B100,B103,B104,B105,B106,B107,B108,B109,B11,B111,B112,B113,B115,B117,B118,B119,B120,B121,B122,B123,B124,B125,B126,B127,B128,B13,B130,B131,B133,B135,B136,B137,B139,B14,B140,B15,B16,B17,B19,B2,B20,B21,B22,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B93,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C17,C18,C19,C2,C20,C21,C23,C24,C25,C26,C27,C28,C29,C31,C32,C34,C35,C36,C37,C38,C39,C40,C41,C42,C43,C44,C46,C47,C49,C5,C50,C51,C52,C53,C55,C56,C57,C59,C6,C60,C61,C62,C64,C65,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	31974874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	B101,B40,C71,D10
lof_cds	Chr1	31974905	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	A2,B90,B92
typical_cds_rare	Chr1	31974905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	3	A2,B90,B92
typical_cds_rare	Chr1	31974921	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	5	B108,B135,B57,C23,C4
lof_cds	Chr1	31974922	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	B108,B57,C23,C4
typical_cds_rare	Chr1	31974922	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	4	B108,B57,C23,C4
typical_cds_rare	Chr1	31974925	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	2	B122,C85
typical_cds_rare	Chr1	31974980	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	D10
typical_cds_rare	Chr1	31974999	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	1	B85
lof_cds	Chr1	31975022	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	18	A10,A20,B117,B16,B18,B2,B38,B55,B57,B66,B74,B76,B9,B93,C16,C58,C62,C80
lof_cds	Chr1	31975055	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131006397	SmilChr01G001737	131006397	rna-XM_057933568.1	9	A19,B125,B21,B32,C49,C50,C55,C60,C77