source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	34653538	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	10	A1,A8,B123,B19,B56,B74,C26,C28,C35,C55
lof_cds	Chr1	34653540	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	10	A1,A8,B123,B19,B56,B74,C26,C28,C35,C55
typical_cds_rare	Chr1	34653553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	3	A2,B140,C39
lof_cds	Chr1	34653562	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	A18
typical_cds_rare	Chr1	34653562	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	A18
typical_cds_rare	Chr1	34653574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	D10
lof_cds	Chr1	34653618	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	7	A7,B113,B41,B44,B97,C12,D4
typical_cds_rare	Chr1	34653674	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	B104
typical_cds_rare	Chr1	34653677	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	5	B112,B63,C43,C78,C9
typical_cds_rare	Chr1	34653691	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	4	B100,B47,D10,D7
lof_cds	Chr1	34653998	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	13	B117,B124,B4,B48,B53,B71,B98,C48,C53,C62,C78,D2,D5
lof_cds	Chr1	34654220	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	173	A1,A11,A13,A14,A18,A21,A22,A23,A24,A25,A3,A4,A5,A7,A9,B1,B100,B104,B106,B107,B108,B11,B110,B113,B115,B117,B119,B12,B120,B121,B124,B126,B127,B128,B129,B130,B131,B133,B134,B136,B139,B140,B15,B16,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B31,B34,B35,B36,B38,B39,B4,B41,B42,B43,B45,B46,B47,B48,B49,B5,B51,B52,B53,B55,B57,B58,B6,B60,B61,B62,B63,B64,B69,B7,B70,B71,B72,B73,B76,B77,B78,B83,B87,B88,B89,B90,B92,B93,B94,B95,B97,B98,C10,C11,C14,C15,C16,C17,C18,C2,C22,C23,C24,C26,C28,C3,C30,C32,C33,C34,C35,C36,C37,C38,C41,C44,C45,C47,C48,C49,C5,C50,C51,C52,C53,C54,C56,C57,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,D11,D2,D5,D7,D8
typical_cds_rare	Chr1	34654818	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	2	C11,C69
lof_cds	Chr1	34654919	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	C59
typical_cds_rare	Chr1	34654919	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	C59
lof_cds	Chr1	34654921	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	118	A1,A13,A14,A15,A19,A2,A22,A24,A25,A3,A5,A6,A7,B1,B10,B101,B102,B104,B105,B107,B108,B111,B114,B115,B118,B120,B123,B126,B128,B129,B130,B131,B132,B135,B14,B140,B16,B18,B19,B2,B20,B21,B22,B25,B27,B3,B32,B33,B35,B37,B41,B48,B49,B5,B54,B56,B60,B61,B62,B63,B65,B66,B67,B73,B74,B75,B77,B79,B86,B88,B91,B96,B98,C10,C11,C12,C15,C18,C20,C21,C23,C27,C3,C30,C31,C35,C36,C38,C39,C4,C40,C42,C44,C45,C47,C49,C50,C53,C55,C57,C60,C69,C71,C74,C75,C76,C78,C80,C84,C86,C9,D10,D2,D4,D6,D7,D8,D9
typical_cds_rare	Chr1	34655284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	B66
typical_cds_rare	Chr1	34655287	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	B104
typical_cds_rare	Chr1	34655300	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	4	A9,B18,B61,B65
lof_cds	Chr1	34655469	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	6	A24,B61,C38,C45,C62,C71
typical_cds_rare	Chr1	34655562	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	2	B140,D7
typical_cds_rare	Chr1	34655681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	3	B126,C44,C45
lof_cds	Chr1	34655746	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	7	A5,B10,B111,B2,B88,B91,C57
typical_cds_rare	Chr1	34655988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	C43
lof_cds	Chr1	34656244	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	7	A16,A4,A7,C19,C60,C8,D7
lof_cds	Chr1	34656249	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	8	A16,A4,A7,B113,C19,C60,C8,D7
typical_cds_rare	Chr1	34656293	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	3	B56,D3,D5
typical_cds_rare	Chr1	34656553	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	3	B49,B62,C83
typical_cds_rare	Chr1	34656564	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	B131
typical_cds_rare	Chr1	34656565	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	4	A9,B18,B61,B65
typical_cds_rare	Chr1	34656573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	4	A9,B18,B61,B65
typical_cds_rare	Chr1	34656687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	3	B49,B62,C83
typical_cds_rare	Chr1	34656722	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	2	B25,B59
typical_cds_rare	Chr1	34656831	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	C43
typical_cds_rare	Chr1	34656832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	5	A14,B106,B51,B62,C33
typical_cds_rare	Chr1	34656853	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006988	SmilChr01G001945	131006988	rna-XM_057934139.1	1	B104