source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	35689444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
typical_cds_rare	Chr1	35689445	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C80
typical_cds_rare	Chr1	35689447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
lof_cds	Chr1	35689474	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	33	A15,A19,A23,A7,B11,B132,B139,B140,B22,B31,B32,B41,B44,B49,B57,B64,B69,B71,B90,B99,C2,C21,C25,C36,C5,C59,C62,C63,C74,C80,C83,D3,D9
typical_cds_rare	Chr1	35689484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	A23
typical_cds_rare	Chr1	35689487	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
lof_cds	Chr1	35689497	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	6	A15,B22,B31,C25,C36,C5
typical_cds_rare	Chr1	35689523	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	B41
lof_cds	Chr1	35689553	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	C61,C85
typical_cds_rare	Chr1	35689553	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	C61,C85
lof_cds	Chr1	35689557	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B35,C61,C85
typical_cds_rare	Chr1	35689557	A	ACT	INDEL	2bp_insertion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B35,C61,C85
typical_cds_rare	Chr1	35689577	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	B41
typical_cds_rare	Chr1	35689581	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C20
typical_cds_rare	Chr1	35689597	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
typical_cds_rare	Chr1	35689629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	A19,A4,A9
lof_cds	Chr1	35689652	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	6	A19,B140,B55,B64,C28,C31
lof_cds	Chr1	35689666	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	A11,B21
typical_cds_rare	Chr1	35689666	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	A11,B21
lof_cds	Chr1	35689710	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	17	B12,B32,B39,B6,B73,B86,C22,C25,C27,C36,C55,C57,C63,C64,C66,C78,D1
typical_cds_rare	Chr1	35689718	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
lof_cds	Chr1	35689743	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	69	A1,A2,A23,A24,A8,B1,B103,B104,B107,B109,B113,B117,B127,B128,B136,B139,B140,B17,B18,B2,B22,B33,B35,B4,B42,B51,B54,B56,B57,B58,B64,B71,B72,B73,B76,B77,B78,B79,B8,B83,B85,B86,B90,B93,B95,B96,B97,C24,C31,C32,C36,C46,C48,C49,C51,C54,C6,C60,C61,C62,C68,C71,C72,C76,C78,C87,C9,D2,D3
lof_cds	Chr1	35689748	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	69	A1,A2,A23,A24,A8,B1,B103,B104,B107,B109,B113,B117,B127,B128,B136,B139,B140,B17,B18,B2,B22,B33,B35,B4,B42,B51,B54,B56,B57,B58,B64,B71,B72,B73,B76,B77,B78,B79,B8,B83,B85,B86,B90,B93,B95,B96,B97,C24,C31,C32,C36,C46,C48,C49,C51,C54,C6,C60,C61,C62,C68,C71,C72,C76,C78,C87,C9,D2,D3
typical_cds_rare	Chr1	35689756	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	C56,D6
typical_cds_rare	Chr1	35689769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	B57,B73,C36,C78
typical_cds_rare	Chr1	35689781	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	C56,D6
typical_cds_rare	Chr1	35689785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	A23,B104,B78,B93
lof_cds	Chr1	35689786	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	30	A1,A2,B100,B131,B140,B2,B33,B42,B44,B51,B53,B54,B56,B58,B64,B68,B72,B8,B90,B97,B99,C20,C27,C32,C46,C48,C60,C61,C68,D8
typical_cds_rare	Chr1	35689798	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
typical_cds_rare	Chr1	35689799	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	A23,B104,B78,B93
lof_cds	Chr1	35689804	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	A1,C78,C8
typical_cds_rare	Chr1	35689804	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	A1,C78,C8
lof_cds	Chr1	35689807	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	A1,C78,C8
typical_cds_rare	Chr1	35689807	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	A1,C78,C8
typical_cds_rare	Chr1	35689813	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	A1,C78,C8
typical_cds_rare	Chr1	35689817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	C56,D6
lof_cds	Chr1	35689845	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B39,C39,C78
typical_cds_rare	Chr1	35689845	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B39,C39,C78
typical_cds_rare	Chr1	35689850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	5	B95,C10,C28,C59,C74
typical_cds_rare	Chr1	35689851	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	5	B95,C10,C28,C59,C74
lof_cds	Chr1	35689852	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B39,C39,C78
typical_cds_rare	Chr1	35689852	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B39,C39,C78
lof_cds	Chr1	35689871	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	14	B125,B35,B36,B39,B41,C11,C32,C49,C6,C61,C72,C78,C87,D7
lof_cds	Chr1	35689876	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	14	B125,B35,B36,B39,B41,C11,C32,C49,C6,C61,C72,C78,C87,D7
typical_cds_rare	Chr1	35689906	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	B75,D10
lof_cds	Chr1	35689939	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	7	A8,B110,B4,C15,C60,C8,C80
typical_cds_rare	Chr1	35689965	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	B61,C60,D1,D6
typical_cds_rare	Chr1	35689995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	B2,B53,B65,B79
typical_cds_rare	Chr1	35690002	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	B110,C15
typical_cds_rare	Chr1	35690007	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	B110
typical_cds_rare	Chr1	35690136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	A11,B21,B85
lof_cds	Chr1	35690137	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	B2,D10
typical_cds_rare	Chr1	35690137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	B2,D10
lof_cds	Chr1	35690143	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
typical_cds_rare	Chr1	35690143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
lof_cds	Chr1	35690147	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C21
typical_cds_rare	Chr1	35690147	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C21
lof_cds	Chr1	35690148	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	18	A19,B22,B26,B27,B32,B34,B36,B37,B57,B61,B7,B82,B9,C25,C47,C80,C84,C85
lof_cds	Chr1	35690154	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	19	A19,B22,B26,B27,B32,B34,B36,B37,B57,B61,B7,B82,B9,C21,C25,C47,C80,C84,C85
lof_cds	Chr1	35690183	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
typical_cds_rare	Chr1	35690183	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
typical_cds_rare	Chr1	35690192	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	B101
typical_cds_rare	Chr1	35690201	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B64,C43,C6
typical_cds_rare	Chr1	35690212	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
lof_cds	Chr1	35690223	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	11	A8,B109,B48,B49,B60,B83,B84,C29,C53,C59,D5
typical_cds_rare	Chr1	35690239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	B66
typical_cds_rare	Chr1	35690251	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	B18
typical_cds_rare	Chr1	35690305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	B35,B52,B57,C78
typical_cds_rare	Chr1	35690322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B122,B124,B134
lof_cds	Chr1	35690346	A	ACT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	30	A15,A16,B100,B107,B113,B115,B124,B125,B18,B22,B35,B38,B41,B58,B6,B68,B85,B96,C11,C36,C55,C6,C61,C7,C72,C85,C87,D2,D6,D9
lof_cds	Chr1	35690347	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	29	A15,A16,B100,B107,B113,B115,B124,B125,B18,B22,B35,B41,B58,B6,B68,B85,B96,C11,C36,C55,C6,C61,C7,C72,C85,C87,D2,D6,D9
typical_cds_rare	Chr1	35690386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
typical_cds_rare	Chr1	35690401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	C83
lof_cds	Chr1	35690434	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	13	A4,A8,B109,B48,B49,B60,B83,B84,C29,C53,C59,D10,D5
lof_cds	Chr1	35690458	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	39	A16,A8,B119,B123,B124,B125,B14,B16,B17,B18,B22,B32,B38,B39,B41,B56,B58,B6,B68,B74,B81,B85,B96,C11,C13,C22,C39,C55,C6,C61,C63,C69,C7,C72,C75,D2,D6,D7,D9
lof_cds	Chr1	35690460	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	61	A1,A13,A9,B1,B117,B12,B120,B129,B131,B137,B139,B14,B17,B19,B2,B22,B26,B27,B28,B29,B32,B34,B4,B41,B43,B54,B57,B59,B64,B65,B69,B7,B71,B73,B76,B78,B82,B88,B9,B92,B99,C12,C14,C36,C38,C43,C5,C51,C6,C60,C61,C62,C75,C77,C80,C83,C85,C9,D1,D3,D7
lof_cds	Chr1	35690462	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	13	A18,A6,B101,B105,B121,B131,B49,B62,C16,C28,C31,C74,C87
lof_cds	Chr1	35690463	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	40	A16,A8,B100,B119,B123,B124,B125,B14,B16,B17,B18,B22,B32,B38,B39,B41,B56,B58,B6,B68,B74,B81,B85,B96,C11,C13,C22,C39,C55,C6,C61,C63,C69,C7,C72,C75,D2,D6,D7,D9
lof_cds	Chr1	35690466	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	13	A18,A6,B101,B105,B121,B131,B49,B62,C16,C28,C31,C74,C87
lof_cds	Chr1	35690467	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	54	A1,A13,A9,B1,B117,B12,B120,B129,B137,B139,B14,B19,B2,B26,B27,B28,B29,B34,B4,B43,B54,B57,B59,B64,B65,B67,B69,B7,B71,B73,B76,B78,B82,B88,B9,B92,B99,C12,C14,C36,C38,C43,C5,C51,C60,C62,C77,C80,C83,C85,C9,D1,D3,D7
typical_cds_rare	Chr1	35690481	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	B117,B71,B99,C77
lof_cds	Chr1	35690541	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	13	A2,B115,B13,B23,B29,B4,B74,B97,C27,C44,C45,C52,C8
typical_cds_rare	Chr1	35690568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	5	A11,B122,B21,C28,C33
typical_cds_rare	Chr1	35690569	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
typical_cds_rare	Chr1	35690571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	A4
typical_cds_rare	Chr1	35690572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
lof_cds	Chr1	35690574	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B122,C28,C33
typical_cds_rare	Chr1	35690574	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B122,C28,C33
typical_cds_rare	Chr1	35690596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	4	A24,A4,B132,D6
typical_cds_rare	Chr1	35690602	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	3	B122,C28,C33
lof_cds	Chr1	35690634	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	B113,C38
typical_cds_rare	Chr1	35690634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	2	B113,C38
typical_cds_rare	Chr1	35690647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
typical_cds_rare	Chr1	35690660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	D10
typical_cds_rare	Chr1	35690686	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	1	B74
typical_cds_rare	Chr1	35690786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	5	B13,B29,B74,C52,C8
typical_cds_rare	Chr1	35690791	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007151	SmilChr01G002014	131007151	rna-XM_057934312.1	5	B13,B29,B74,C52,C8