source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	38102133	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	B117,B66
typical_cds_rare	Chr1	38102133	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	B117,B66
lof_cds	Chr1	38102137	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B66
typical_cds_rare	Chr1	38102137	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B66
lof_cds	Chr1	38102139	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	B3,B76
typical_cds_rare	Chr1	38102139	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	B3,B76
typical_cds_rare	Chr1	38102159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	4	A22,B46,B94,C65
typical_cds_rare	Chr1	38102171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	A5,B17
lof_cds	Chr1	38102172	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	5	B124,B45,C37,C48,C57
typical_cds_rare	Chr1	38102172	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	5	B124,B45,C37,C48,C57
typical_cds_rare	Chr1	38102173	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	5	B138,B47,B55,C53,C61
typical_cds_rare	Chr1	38102179	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	A20,B111,B21
lof_cds	Chr1	38102221	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	155	A1,A10,A11,A13,A14,A18,A20,A24,A25,A3,A5,A6,A7,A9,B1,B100,B101,B103,B105,B106,B110,B111,B115,B117,B118,B119,B120,B125,B127,B128,B129,B13,B131,B132,B134,B135,B137,B138,B139,B140,B15,B18,B20,B21,B25,B27,B28,B30,B33,B34,B35,B37,B39,B4,B40,B45,B46,B47,B49,B5,B50,B51,B53,B54,B55,B56,B57,B59,B6,B60,B61,B63,B64,B67,B68,B69,B7,B72,B73,B74,B75,B76,B77,B80,B83,B86,B9,B91,B93,B96,B97,B98,B99,C1,C11,C12,C13,C14,C15,C17,C18,C19,C22,C25,C26,C27,C29,C30,C31,C32,C33,C35,C4,C40,C42,C44,C45,C47,C48,C5,C50,C51,C52,C53,C54,C56,C57,C58,C59,C6,C60,C61,C65,C68,C69,C7,C70,C72,C73,C75,C76,C78,C8,C80,C81,C84,C85,C86,C9,D1,D10,D2,D5,D6,D8
typical_cds_rare	Chr1	38102223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	B114,B28
lof_cds	Chr1	38102233	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	B13,B76,D10
typical_cds_rare	Chr1	38102233	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	B13,B76,D10
typical_cds_rare	Chr1	38102246	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	A1
typical_cds_rare	Chr1	38102257	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	B47,C48,D7
typical_cds_rare	Chr1	38102265	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	4	B33,B49,B98,C32
typical_cds_rare	Chr1	38102294	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	A5
typical_cds_rare	Chr1	38102315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	C12
typical_cds_rare	Chr1	38102316	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B13
lof_cds	Chr1	38102372	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	17	A13,B108,B111,B125,B129,B19,B22,B91,C2,C23,C32,C63,C68,C7,C72,C73,C85
lof_cds	Chr1	38102376	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B1
typical_cds_rare	Chr1	38102376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B1
typical_cds_rare	Chr1	38102381	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	A2,B49
typical_cds_rare	Chr1	38102573	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	C9
lof_cds	Chr1	38102576	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	177	A1,A10,A11,A13,A14,A16,A19,A20,A21,A22,A24,A25,A3,A6,A7,A9,B1,B101,B103,B106,B107,B110,B111,B112,B114,B115,B118,B119,B120,B121,B123,B124,B125,B127,B128,B129,B13,B130,B131,B134,B135,B136,B137,B138,B139,B140,B15,B18,B2,B20,B21,B22,B23,B25,B27,B28,B30,B33,B34,B35,B37,B39,B4,B41,B42,B43,B44,B45,B46,B47,B49,B50,B51,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B67,B68,B69,B7,B70,B72,B73,B75,B76,B77,B78,B8,B82,B83,B86,B9,B90,B91,B93,B96,B97,B98,B99,C1,C11,C13,C14,C16,C17,C19,C2,C20,C21,C24,C26,C27,C29,C30,C31,C32,C33,C35,C4,C40,C44,C45,C47,C5,C50,C51,C52,C53,C54,C57,C58,C59,C6,C60,C61,C65,C67,C68,C69,C7,C70,C72,C73,C74,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D4,D5,D6,D8,D9
lof_cds	Chr1	38102581	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	182	A1,A10,A11,A13,A14,A16,A19,A20,A21,A22,A24,A25,A3,A6,A7,A9,B1,B101,B103,B106,B107,B110,B111,B112,B114,B115,B118,B119,B120,B123,B124,B125,B127,B128,B129,B13,B130,B131,B132,B134,B135,B136,B137,B138,B139,B140,B15,B18,B2,B20,B21,B22,B23,B25,B27,B28,B30,B33,B34,B35,B37,B39,B4,B41,B42,B43,B44,B45,B46,B47,B49,B5,B50,B51,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B67,B68,B69,B7,B70,B72,B73,B75,B76,B77,B78,B8,B82,B83,B86,B9,B90,B91,B93,B94,B96,B97,B98,B99,C1,C11,C12,C13,C14,C15,C16,C17,C19,C2,C20,C21,C22,C24,C26,C27,C29,C30,C31,C32,C33,C35,C4,C40,C42,C44,C45,C47,C5,C50,C51,C52,C53,C54,C57,C58,C59,C6,C60,C61,C65,C67,C68,C69,C7,C70,C73,C74,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D4,D5,D6,D8,D9
typical_cds_rare	Chr1	38102613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	C38
lof_cds	Chr1	38102616	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	A22,B46,C65
typical_cds_rare	Chr1	38102616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	A22,B46,C65
typical_cds_rare	Chr1	38102635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	B44,C3,C83
typical_cds_rare	Chr1	38102636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	C4
typical_cds_rare	Chr1	38102639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	A1
typical_cds_rare	Chr1	38102649	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	A8
lof_cds	Chr1	38102653	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	27	A16,B123,B125,B136,B18,B19,B2,B26,B38,B39,B51,B56,B6,B61,B72,B73,B96,C29,C33,C34,C38,C4,C43,C52,C56,C67,C73
typical_cds_rare	Chr1	38102674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	D1
lof_cds	Chr1	38102717	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	28	A10,A16,B103,B107,B112,B123,B134,B25,B26,B36,B4,B42,B43,B44,B58,B59,B70,B8,B82,B91,C2,C21,C24,C34,C68,C83,C9,D9
typical_cds_rare	Chr1	38102726	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	4	B5,B80,C17,C61
typical_cds_rare	Chr1	38102730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	2	B11,B135
typical_cds_rare	Chr1	38102807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	4	B132,B72,C24,C73
typical_cds_rare	Chr1	38102879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B104
typical_cds_rare	Chr1	38102902	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	3	A2,B114,B49
typical_cds_rare	Chr1	38102904	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	D7
typical_cds_rare	Chr1	38102919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B132
typical_cds_rare	Chr1	38102931	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	C4
lof_cds	Chr1	38102964	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B35
typical_cds_rare	Chr1	38102964	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024309	SmilChr01G002193	131024309	rna-XM_057953818.1	1	B35