source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	39435189	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	89	A10,A16,A2,A22,A24,A25,A5,A6,B105,B107,B108,B11,B111,B118,B123,B124,B125,B126,B130,B131,B136,B138,B14,B17,B21,B24,B25,B26,B3,B33,B34,B39,B4,B44,B46,B50,B52,B56,B59,B60,B61,B62,B65,B67,B68,B69,B70,B72,B80,B90,B97,B98,C12,C14,C17,C18,C19,C23,C24,C30,C32,C36,C37,C38,C4,C45,C46,C49,C53,C56,C57,C59,C62,C63,C66,C68,C70,C72,C73,C74,C77,C8,C83,C85,C87,D2,D3,D4,D9
typical_cds_rare	Chr1	39435490	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	B64,C9
typical_cds_rare	Chr1	39435514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	4	B105,B22,C64,C85
lof_cds	Chr1	39435539	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	B118,D6
typical_cds_rare	Chr1	39435539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	B118,D6
typical_cds_rare	Chr1	39435568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	B2
typical_cds_rare	Chr1	39435587	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	A20,B76
lof_cds	Chr1	39435626	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	20	A8,B10,B108,B110,B115,B12,B13,B64,B67,B71,B82,B90,B92,C23,C46,C47,C52,C74,C81,C86
typical_cds_rare	Chr1	39435628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	3	A22,B76,C49
typical_cds_rare	Chr1	39435634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	3	B44,C75,D3
typical_cds_rare	Chr1	39435662	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	5	B107,B5,B62,B76,C60
typical_cds_rare	Chr1	39435664	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	4	A24,B54,C41,D9
typical_cds_rare	Chr1	39435677	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	4	B69,B95,C41,C74
typical_cds_rare	Chr1	39435683	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	B109
typical_cds_rare	Chr1	39435722	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	5	B107,B5,B62,B76,C60
typical_cds_rare	Chr1	39435758	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	5	A22,B59,B72,B8,C49
typical_cds_rare	Chr1	39435764	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	C61,D10
typical_cds_rare	Chr1	39435776	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	B104
lof_cds	Chr1	39435821	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	46	A3,A4,A9,B101,B103,B11,B111,B112,B135,B136,B15,B37,B52,B57,B58,B60,B66,B72,B77,B80,B83,B87,B93,B94,B98,C27,C3,C31,C36,C40,C43,C51,C53,C55,C58,C59,C60,C62,C7,C79,C8,C80,C84,D10,D3,D8
typical_cds_rare	Chr1	39435823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	3	A24,B104,B33
typical_cds_rare	Chr1	39435829	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	B38
lof_cds	Chr1	39435940	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	C23,C61
typical_cds_rare	Chr1	39435940	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	C23,C61
lof_cds	Chr1	39435985	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	89	A14,A18,A20,A24,A25,A4,A6,B104,B105,B106,B11,B111,B120,B124,B129,B130,B134,B135,B137,B139,B15,B2,B24,B25,B26,B37,B46,B47,B5,B50,B59,B60,B61,B62,B63,B65,B67,B69,B7,B77,B78,B80,B82,B83,B86,B88,B90,B91,B93,B95,B98,C12,C14,C15,C16,C17,C18,C19,C20,C25,C26,C30,C31,C35,C4,C45,C46,C49,C53,C56,C57,C59,C6,C62,C63,C64,C66,C68,C71,C73,C78,C8,C80,C85,D10,D3,D6,D7,D9
typical_cds_rare	Chr1	39436165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	D11
typical_cds_rare	Chr1	39436195	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	3	A24,B104,B33
lof_cds	Chr1	39436207	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	6	B105,B22,C34,C6,C64,C85
lof_cds	Chr1	39436216	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	12	A21,B110,B137,B20,B57,B67,B86,B9,C18,C54,C57,C6
lof_cds	Chr1	39436224	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	11	A22,B102,B59,B61,B7,B8,C29,C48,C49,C5,C75
lof_cds	Chr1	39436227	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	11	A22,B102,B59,B61,B7,B8,C29,C48,C49,C5,C75
typical_cds_rare	Chr1	39436236	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	4	B24,B87,C70,C9
typical_cds_rare	Chr1	39436241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	B17,C70
typical_cds_rare	Chr1	39436284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	B13
typical_cds_rare	Chr1	39436300	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	C61
typical_cds_rare	Chr1	39436302	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	D10
lof_cds	Chr1	39436319	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	13	A22,B102,B59,B61,B7,B72,B76,B8,C29,C48,C49,C5,C75
typical_cds_rare	Chr1	39436328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	5	A7,C11,C33,C69,C87
typical_cds_rare	Chr1	39436357	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	B2
typical_cds_rare	Chr1	39436472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	4	B11,B17,C30,C70
typical_cds_rare	Chr1	39436486	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	B98
lof_cds	Chr1	39436502	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	3	B63,B83,C46
typical_cds_rare	Chr1	39436502	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	3	B63,B83,C46
typical_cds_rare	Chr1	39436528	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	2	C18,C2
typical_cds_rare	Chr1	39436542	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014254	SmilChr01G002263	131014254	rna-XM_057942168.1	1	C37