source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	39471624	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B5
typical_cds_rare	Chr1	39471624	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B5
typical_cds_rare	Chr1	39471639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	2	C82,D11
lof_cds	Chr1	39471646	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	A15
typical_cds_rare	Chr1	39471646	T	TGC	INDEL	2bp_insertion	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	A15
lof_cds	Chr1	39471651	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	A3,B113,C61
typical_cds_rare	Chr1	39471651	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	A3,B113,C61
lof_cds	Chr1	39471654	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	A3,B113,C61
typical_cds_rare	Chr1	39471654	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	A3,B113,C61
lof_cds	Chr1	39471667	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	B22,B23,C39
typical_cds_rare	Chr1	39471667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	B22,B23,C39
typical_cds_rare	Chr1	39471676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	D10
lof_cds	Chr1	39472762	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	A9,B61,B65
typical_cds_rare	Chr1	39472762	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	A9,B61,B65
typical_cds_rare	Chr1	39472774	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	2	B104,D10
lof_cds	Chr1	39472792	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	C39
typical_cds_rare	Chr1	39472792	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	C39
lof_cds	Chr1	39472821	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	70	A10,A14,A15,A20,A24,B10,B105,B109,B112,B115,B119,B12,B126,B128,B13,B131,B134,B18,B2,B20,B21,B24,B29,B3,B30,B34,B36,B4,B46,B51,B52,B53,B57,B62,B66,B67,B68,B7,B76,B86,B88,B9,B92,B94,B96,C15,C29,C3,C30,C36,C4,C45,C47,C48,C49,C5,C56,C58,C6,C60,C61,C62,C63,C67,C72,C77,C85,C9,D10,D7
typical_cds_rare	Chr1	39472841	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B75
typical_cds_rare	Chr1	39472849	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B75
lof_cds	Chr1	39472853	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	57	A10,A21,A7,B1,B100,B101,B104,B106,B107,B119,B122,B123,B132,B14,B15,B17,B23,B24,B30,B32,B44,B45,B46,B50,B58,B63,B7,B70,B77,B81,B83,B84,C1,C10,C12,C16,C17,C18,C19,C30,C50,C52,C53,C54,C57,C59,C64,C66,C7,C72,C76,C78,C8,C83,C86,C87,D4
typical_cds_rare	Chr1	39472858	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B48
typical_cds_rare	Chr1	39472861	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B35
typical_cds_rare	Chr1	39472918	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	C44
typical_cds_rare	Chr1	39472927	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	5	B139,B22,B25,B79,D9
lof_cds	Chr1	39472931	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	10	A4,A6,B136,B4,B51,B82,C3,C63,C78,C83
typical_cds_rare	Chr1	39472958	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	A3
typical_cds_rare	Chr1	39472961	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B75
typical_cds_rare	Chr1	39472995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	2	B45,C87
lof_cds	Chr1	39473026	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	15	A18,B102,B16,B3,B41,B64,B69,B82,C16,C17,C24,C34,C45,C79,D9
typical_cds_rare	Chr1	39473032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	5	A19,A3,B121,B124,B49
typical_cds_rare	Chr1	39473073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B1
typical_cds_rare	Chr1	39473080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	3	C32,C68,C72
typical_cds_rare	Chr1	39473120	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	2	B74,C33
lof_cds	Chr1	39473128	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B53
typical_cds_rare	Chr1	39473128	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	1	B53
lof_cds	Chr1	39473138	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	107	A10,A14,A15,A18,A20,A22,A24,A3,A6,B10,B102,B105,B107,B109,B110,B112,B113,B115,B119,B12,B121,B122,B123,B126,B128,B13,B131,B134,B138,B16,B18,B2,B20,B21,B24,B25,B29,B3,B30,B33,B34,B36,B4,B41,B46,B48,B51,B52,B53,B54,B57,B64,B67,B68,B69,B75,B76,B82,B86,B88,B9,B90,B92,B94,B96,B97,C11,C12,C15,C16,C17,C2,C24,C29,C3,C30,C31,C34,C36,C37,C4,C42,C43,C45,C47,C48,C49,C5,C56,C58,C6,C60,C61,C62,C63,C69,C72,C77,C79,C83,C85,C9,D10,D5,D6,D7,D9
lof_cds	Chr1	39473140	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	109	A10,A14,A15,A18,A20,A22,A24,A3,A6,B10,B102,B105,B107,B109,B110,B112,B113,B115,B119,B12,B121,B122,B123,B126,B128,B13,B131,B134,B138,B16,B18,B2,B20,B21,B24,B25,B29,B3,B30,B33,B34,B36,B4,B41,B46,B48,B51,B52,B53,B54,B57,B64,B66,B67,B68,B69,B75,B76,B82,B86,B87,B88,B9,B90,B92,B94,B96,C11,C12,C15,C16,C17,C2,C24,C29,C3,C30,C31,C34,C36,C37,C4,C42,C43,C45,C47,C48,C49,C5,C52,C56,C58,C6,C60,C61,C62,C63,C69,C72,C77,C79,C83,C85,C9,D10,D5,D6,D7,D9
lof_cds	Chr1	39473155	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131014920	SmilChr01G002270	131014920	rna-XM_057943095.1	6	B1,B104,B115,B50,B60,B81