source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	40495965	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	C22,C35
typical_cds_rare	Chr1	40495978	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	C2,C32,C68
typical_cds_rare	Chr1	40495982	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B33,B8
typical_cds_rare	Chr1	40495988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B2
typical_cds_rare	Chr1	40496013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B29
typical_cds_rare	Chr1	40496014	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	B42,B49,B76
lof_cds	Chr1	40496043	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	14	A18,A8,B29,B35,B37,B45,B59,C20,C48,C56,C57,C76,C77,D3
lof_cds	Chr1	40496046	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C9
typical_cds_rare	Chr1	40496046	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C9
typical_cds_rare	Chr1	40496066	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	A16
typical_cds_rare	Chr1	40496083	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B85,C28
typical_cds_rare	Chr1	40496098	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B23,B87
typical_cds_rare	Chr1	40496100	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B138,B18,C17,C72
typical_cds_rare	Chr1	40496117	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B13
lof_cds	Chr1	40496119	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	86	A10,A14,A18,A19,A20,A21,A23,A25,A5,A8,A9,B101,B102,B103,B106,B107,B112,B119,B12,B120,B123,B130,B132,B133,B135,B137,B139,B15,B23,B24,B25,B29,B34,B35,B37,B4,B41,B45,B57,B59,B60,B63,B66,B67,B69,B70,B73,B81,B82,B83,B86,B88,B9,B90,B94,C1,C10,C13,C2,C20,C24,C27,C32,C33,C43,C44,C46,C48,C51,C53,C54,C56,C57,C63,C64,C68,C71,C74,C75,C76,C77,C82,C83,C84,D10,D4
lof_cds	Chr1	40496332	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B70,C40
typical_cds_rare	Chr1	40496332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B70,C40
typical_cds_rare	Chr1	40496343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B89,C10,C49,D2
typical_cds_rare	Chr1	40496346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	A3,B66,B74
typical_cds_rare	Chr1	40496368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	A3,B59,C55
typical_cds_rare	Chr1	40496383	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	A3,B59
lof_cds	Chr1	40496388	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	C29,C65
typical_cds_rare	Chr1	40496388	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	C29,C65
typical_cds_rare	Chr1	40496396	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	5	B18,B28,B48,C14,C4
typical_cds_rare	Chr1	40496426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C54
lof_cds	Chr1	40496436	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	6	B105,B75,B91,C20,C57,C77
typical_cds_rare	Chr1	40496470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	A5,B75
typical_cds_rare	Chr1	40496484	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	5	B102,B35,B63,C48,C57
typical_cds_rare	Chr1	40496695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B44
lof_cds	Chr1	40497000	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	10	A13,B23,B40,B59,B88,B89,C11,C33,C69,D8
typical_cds_rare	Chr1	40497063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B49,B99
typical_cds_rare	Chr1	40497112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C7
typical_cds_rare	Chr1	40497142	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B110
typical_cds_rare	Chr1	40497205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	B124,C62,C78
typical_cds_rare	Chr1	40497213	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B3,C18
typical_cds_rare	Chr1	40497398	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B82
typical_cds_rare	Chr1	40497399	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B33,C82
typical_cds_rare	Chr1	40497405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	B107,C10,D11
typical_cds_rare	Chr1	40497420	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B45,B47,B86,C3
typical_cds_rare	Chr1	40497449	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B107,C10,C3,D11
typical_cds_rare	Chr1	40497470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	5	B15,B63,C15,C49,C61
typical_cds_rare	Chr1	40497517	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B8
typical_cds_rare	Chr1	40497533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B119,C29,C53,C59
typical_cds_rare	Chr1	40497551	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C30
typical_cds_rare	Chr1	40497563	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	B119,C53,C59
typical_cds_rare	Chr1	40497586	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B70,B91
typical_cds_rare	Chr1	40497608	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	B49,B66,B99
typical_cds_rare	Chr1	40497623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B16,B2,C15,C27
typical_cds_rare	Chr1	40497672	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B16,B47,C45,C85
typical_cds_rare	Chr1	40497727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	5	B124,B81,C18,C62,C78
typical_cds_rare	Chr1	40497807	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B82
typical_cds_rare	Chr1	40497823	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	A6
typical_cds_rare	Chr1	40497839	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	D11
typical_cds_rare	Chr1	40497852	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B101,C51
typical_cds_rare	Chr1	40497917	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B130,C53
typical_cds_rare	Chr1	40497957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B21
lof_cds	Chr1	40497960	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	8	B4,B45,B59,B89,C38,C58,C63,D5
lof_cds	Chr1	40497966	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	5	B30,C30,C35,C5,C75
typical_cds_rare	Chr1	40497966	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	5	B30,C30,C35,C5,C75
typical_cds_rare	Chr1	40497987	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	A8,B38,B39
typical_cds_rare	Chr1	40497997	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B78
typical_cds_rare	Chr1	40498002	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B49,B99
typical_cds_rare	Chr1	40498124	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C9
typical_cds_rare	Chr1	40498489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	A14
typical_cds_rare	Chr1	40498624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	5	B123,B130,B49,B99,C53
typical_cds_rare	Chr1	40498744	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	4	B85,C14,C55,C74
typical_cds_rare	Chr1	40498777	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B84
typical_cds_rare	Chr1	40499130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B78,D2
typical_cds_rare	Chr1	40499136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B115,B28
lof_cds	Chr1	40499159	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	B81,C18,C42
typical_cds_rare	Chr1	40499159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	3	B81,C18,C42
typical_cds_rare	Chr1	40499297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C8
typical_cds_rare	Chr1	40499298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B13,C51
typical_cds_rare	Chr1	40499304	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C21
typical_cds_rare	Chr1	40499347	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B28
typical_cds_rare	Chr1	40499352	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B28
lof_cds	Chr1	40499396	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B81
typical_cds_rare	Chr1	40499396	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B81
typical_cds_rare	Chr1	40499417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B81,C62
typical_cds_rare	Chr1	40499488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	D1
typical_cds_rare	Chr1	40499590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B78
typical_cds_rare	Chr1	40499606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	C62,C78
typical_cds_rare	Chr1	40499625	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	2	B21,C72
typical_cds_rare	Chr1	40499847	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	C28
lof_cds	Chr1	40499875	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B136
typical_cds_rare	Chr1	40499875	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	B136
typical_cds_rare	Chr1	40499952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008108	SmilChr01G002334	131008108	rna-XM_057935008.1	1	A19