source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	40777314	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B104
typical_cds_rare	Chr1	40777366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	4	A1,A14,B21,C64
typical_cds_rare	Chr1	40777387	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	3	B128,C34,C75
typical_cds_rare	Chr1	40777402	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	3	B47,C51,C74
typical_cds_rare	Chr1	40777438	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B9
typical_cds_rare	Chr1	40778908	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	B12,B91
typical_cds_rare	Chr1	40778921	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	B131,D10
typical_cds_rare	Chr1	40778943	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	C86
lof_cds	Chr1	40779120	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	5	A21,B40,B53,B99,C74
typical_cds_rare	Chr1	40779120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	5	A21,B40,B53,B99,C74
lof_cds	Chr1	40779144	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B99
typical_cds_rare	Chr1	40779144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B99
lof_cds	Chr1	40779195	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	A20,B18
typical_cds_rare	Chr1	40779195	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	A20,B18
typical_cds_rare	Chr1	40779216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	4	B137,B68,B79,D3
typical_cds_rare	Chr1	40779217	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	B110,D3
typical_cds_rare	Chr1	40779426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	5	A6,B108,B79,C20,C43
lof_cds	Chr1	40779442	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	7	B10,B137,B42,B43,B60,C15,D9
typical_cds_rare	Chr1	40779466	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	4	A9,B103,C12,C57
typical_cds_rare	Chr1	40779510	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	4	B108,B122,B99,C35
typical_cds_rare	Chr1	40779523	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	3	A18,B12,C37
typical_cds_rare	Chr1	40779524	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B13
lof_cds	Chr1	40779531	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	49	A10,A11,A16,A18,A19,A2,A3,B1,B100,B106,B107,B109,B12,B120,B129,B130,B134,B29,B40,B42,B43,B45,B57,B74,B8,B80,B84,B87,B9,B98,C1,C16,C26,C27,C28,C32,C45,C54,C57,C59,C61,C68,C70,C73,C87,D10,D6,D7,D9
typical_cds_rare	Chr1	40779533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	4	B113,B118,C56,D11
typical_cds_rare	Chr1	40779543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	4	B103,B118,B73,D6
typical_cds_rare	Chr1	40779672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	5	B106,B121,C35,C42,C59
typical_cds_rare	Chr1	40779723	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	5	B15,B50,B86,C10,C43
lof_cds	Chr1	40779731	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	5	A20,B44,B47,C51,C74
typical_cds_rare	Chr1	40779731	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	5	A20,B44,B47,C51,C74
lof_cds	Chr1	40779743	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	95	A14,A18,A21,A23,A24,A5,B103,B104,B105,B106,B108,B11,B111,B113,B114,B115,B118,B119,B12,B124,B126,B128,B130,B131,B133,B137,B138,B139,B140,B17,B21,B23,B25,B26,B27,B28,B29,B30,B31,B33,B37,B40,B41,B44,B47,B48,B51,B52,B53,B54,B55,B57,B58,B60,B63,B64,B65,B69,B70,B82,B85,B94,B95,C14,C17,C23,C24,C3,C31,C36,C38,C39,C4,C42,C43,C44,C5,C50,C51,C56,C57,C6,C64,C66,C67,C71,C74,C79,C80,C81,C83,C85,D10,D11,D3
lof_cds	Chr1	40779745	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B135
typical_cds_rare	Chr1	40779745	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B135
typical_cds_rare	Chr1	40779750	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	C11
lof_cds	Chr1	40780461	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	B3,C4
typical_cds_rare	Chr1	40780461	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	B3,C4
typical_cds_rare	Chr1	40780514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	B122
typical_cds_rare	Chr1	40780521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	1	C37
typical_cds_rare	Chr1	40780531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	C37,C82
lof_cds	Chr1	40780655	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	11	A23,B100,B37,B53,B94,C14,C26,C29,C42,C43,C56
typical_cds_rare	Chr1	40780662	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	3	B128,C34,C75
typical_cds_rare	Chr1	40780670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	3	B128,C34,C75
typical_cds_rare	Chr1	40780685	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131024783	SmilChr01G002362	131024783	rna-XM_057954322.1	2	B108,C23