source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	42438947	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	143	A10,A11,A13,A14,A19,A2,A20,A21,A23,A24,A25,A4,A5,A7,A8,A9,B1,B101,B105,B106,B108,B109,B110,B112,B115,B122,B124,B125,B126,B127,B128,B129,B130,B132,B134,B136,B137,B138,B14,B140,B15,B16,B17,B18,B19,B20,B22,B23,B24,B26,B29,B3,B31,B33,B34,B35,B37,B38,B39,B4,B40,B44,B46,B47,B48,B51,B53,B54,B56,B57,B58,B63,B67,B68,B70,B71,B72,B73,B74,B75,B77,B79,B80,B81,B84,B87,B88,B89,B90,B92,B93,B94,B95,B96,B99,C1,C11,C12,C15,C16,C18,C21,C22,C24,C26,C28,C29,C30,C33,C34,C36,C38,C4,C43,C44,C46,C47,C49,C5,C50,C54,C58,C61,C62,C63,C64,C66,C67,C70,C71,C73,C77,C78,C8,C80,C81,C82,C85,D1,D3,D5,D8,D9
lof_cds	Chr1	42439070	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	79	A10,A11,A13,A19,A21,A23,B10,B106,B109,B110,B112,B125,B126,B127,B130,B136,B138,B14,B16,B17,B19,B22,B24,B26,B31,B34,B35,B36,B37,B38,B39,B44,B47,B48,B5,B51,B53,B55,B56,B58,B60,B64,B67,B77,B80,B81,B86,B89,B90,B93,C1,C12,C16,C18,C22,C24,C26,C28,C35,C42,C44,C46,C47,C52,C57,C6,C61,C70,C73,C75,C8,C80,C81,C82,C83,C85,C9,D5,D9
lof_cds	Chr1	42439239	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	D11
typical_cds_rare	Chr1	42439239	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	D11
typical_cds_rare	Chr1	42439241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	D11
typical_cds_rare	Chr1	42439411	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B130,B85
typical_cds_rare	Chr1	42439508	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	4	B1,B7,C35,C61
typical_cds_rare	Chr1	42439548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	3	B114,B123,B59
lof_cds	Chr1	42440800	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	C79
typical_cds_rare	Chr1	42440800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	C79
lof_cds	Chr1	42440801	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	C32,C68
typical_cds_rare	Chr1	42440801	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	C32,C68
typical_cds_rare	Chr1	42440870	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	B140
typical_cds_rare	Chr1	42440994	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B114,B123
lof_cds	Chr1	42441007	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	C43
typical_cds_rare	Chr1	42441007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	C43
typical_cds_rare	Chr1	42441114	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	4	B22,B67,C29,C42
typical_cds_rare	Chr1	42441150	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	3	B22,B67,C29
typical_cds_rare	Chr1	42441237	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B1,C35
typical_cds_rare	Chr1	42441271	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B114,B59
typical_cds_rare	Chr1	42441279	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	C15,C57
typical_cds_rare	Chr1	42441295	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	C32,C68
typical_cds_rare	Chr1	42441362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	A18,B13
lof_cds	Chr1	42441416	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	C12
typical_cds_rare	Chr1	42441416	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	C12
typical_cds_rare	Chr1	42441451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	3	B114,B123,B59
typical_cds_rare	Chr1	42442879	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	C49
typical_cds_rare	Chr1	42442897	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	D7
typical_cds_rare	Chr1	42442902	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B90,B92
typical_cds_rare	Chr1	42442903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B90,B92
typical_cds_rare	Chr1	42442938	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	3	B41,C1,C17
typical_cds_rare	Chr1	42442997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	5	B22,B67,B79,C29,C42
typical_cds_rare	Chr1	42443009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B107,C5
typical_cds_rare	Chr1	42443044	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B107,C5
typical_cds_rare	Chr1	42443073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	4	A1,B94,C50,C84
typical_cds_rare	Chr1	42443118	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	5	B22,B67,B79,C29,C42
typical_cds_rare	Chr1	42443352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	2	B107,C5
typical_cds_rare	Chr1	42443463	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025692	SmilChr01G002472	131025692	rna-XM_057955486.1	1	B13