source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	42490440	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	14	A18,A7,B1,B11,B130,B82,B83,B85,C19,C39,C40,C70,C71,D11
typical_cds_rare	Chr1	42490451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	2	B122,B2
typical_cds_rare	Chr1	42490606	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	D11
typical_cds_rare	Chr1	42490726	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	B30
typical_cds_rare	Chr1	42490746	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	D11
typical_cds_rare	Chr1	42492762	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	D3
typical_cds_rare	Chr1	42492817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	2	B35,B46
typical_cds_rare	Chr1	42492822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	C10
lof_cds	Chr1	42492825	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	3	C58,D10,D6
typical_cds_rare	Chr1	42492825	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	3	C58,D10,D6
lof_cds	Chr1	42492845	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	16	A21,A4,B115,B118,B15,B22,B74,B76,B86,C18,C40,C41,C44,C54,C73,C75
typical_cds_rare	Chr1	42492860	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	5	A7,C2,C23,C25,C40
typical_cds_rare	Chr1	42492873	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	B44
lof_cds	Chr1	42492882	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	B47
typical_cds_rare	Chr1	42492882	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	B47
lof_cds	Chr1	42492913	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	217	A1,A11,A14,A15,A16,A19,A2,A20,A23,A25,A3,A4,A5,A6,A7,A8,B1,B10,B100,B101,B102,B103,B105,B107,B108,B109,B114,B115,B117,B118,B119,B12,B120,B121,B122,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B51,B52,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B63,B64,B65,B68,B69,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C43,C45,C46,C47,C50,C51,C53,C54,C55,C57,C58,C59,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	42492949	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	B44
lof_cds	Chr1	42493004	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	249	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B48,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B6,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	42493061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	5	A4,B119,B76,C18,C75
lof_cds	Chr1	42493075	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	256	A1,A10,A11,A13,A14,A15,A16,A18,A19,A20,A21,A22,A23,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	42493081	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	3	B115,C80,C82
typical_cds_rare	Chr1	42493170	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	B22
lof_cds	Chr1	42493224	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	250	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B111,B112,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B80,B82,B83,B84,B85,B86,B87,B88,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	42493261	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	2	B110,D3
lof_cds	Chr1	42493277	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	76	A14,A20,A23,A5,A6,A8,B1,B10,B101,B106,B107,B108,B112,B115,B117,B12,B120,B121,B122,B13,B130,B138,B14,B15,B19,B24,B30,B32,B34,B35,B46,B47,B51,B53,B58,B63,B67,B70,B77,B8,B89,B93,B96,B97,B99,C13,C16,C20,C21,C22,C24,C27,C28,C29,C33,C36,C42,C43,C46,C51,C55,C59,C62,C63,C64,C65,C68,C70,C71,C72,C74,C80,C87,D2,D3,D5
lof_cds	Chr1	42493303	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	245	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B11,B110,B111,B112,B113,B114,B115,B118,B119,B12,B120,B121,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B80,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C59,C60,C61,C62,C63,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	42493338	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	3	B28,C29,C57
typical_cds_rare	Chr1	42493400	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	1	B21
typical_cds_rare	Chr1	42493432	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131025712	SmilChr01G002475	131025712	rna-XM_057955504.1	2	B68,C42