source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	42711539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D11
lof_cds	Chr1	42711541	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	28	A11,A20,A23,A3,A8,B101,B117,B18,B2,B3,B40,B48,B52,B73,B81,C1,C16,C18,C24,C34,C49,C52,C56,C6,C62,C80,D8,D9
typical_cds_rare	Chr1	42711595	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B41
lof_cds	Chr1	42711598	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D3
typical_cds_rare	Chr1	42711598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D3
typical_cds_rare	Chr1	42711599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	5	B83,C35,C64,C67,C80
typical_cds_rare	Chr1	42711602	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	C35,C64,C80
typical_cds_rare	Chr1	42711635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	5	A9,B56,B82,B96,C65
typical_cds_rare	Chr1	42711641	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	B113,B34,B36,C7
typical_cds_rare	Chr1	42711653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B50,B74
typical_cds_rare	Chr1	42711676	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D6
typical_cds_rare	Chr1	42711713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	5	B105,B135,B58,C34,D7
typical_cds_rare	Chr1	42711755	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B83
typical_cds_rare	Chr1	42711765	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B104,C38
typical_cds_rare	Chr1	42711797	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B23,B79
typical_cds_rare	Chr1	42711801	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B83,C36,C59
typical_cds_rare	Chr1	42711813	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B96,D11
typical_cds_rare	Chr1	42711819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B18,B20,B99
typical_cds_rare	Chr1	42711829	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B113,B43
typical_cds_rare	Chr1	42711868	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	C29
typical_cds_rare	Chr1	42711881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	A9
typical_cds_rare	Chr1	42711910	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	A18,C19,C24,C46
typical_cds_rare	Chr1	42711911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B50
typical_cds_rare	Chr1	42711912	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B50,C48
typical_cds_rare	Chr1	42712010	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	A16,B94,C14,C72
typical_cds_rare	Chr1	42712025	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	B14,B66,B85,C38
typical_cds_rare	Chr1	42712030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B90,C52,C75
typical_cds_rare	Chr1	42712044	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B113,B96,C63
typical_cds_rare	Chr1	42712073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B1
typical_cds_rare	Chr1	42712083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	A21,A9,B90,C75
typical_cds_rare	Chr1	42712099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B118,B97
typical_cds_rare	Chr1	42712102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B63
typical_cds_rare	Chr1	42712103	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B29,D9
typical_cds_rare	Chr1	42712139	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B97,C39
typical_cds_rare	Chr1	42712159	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	5	B117,B125,B21,B52,C55
lof_cds	Chr1	42712175	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	49	A15,A19,B1,B102,B103,B107,B114,B120,B124,B134,B2,B21,B24,B45,B52,B53,B63,B66,B7,B81,B83,B86,B87,B95,B97,C12,C21,C27,C30,C32,C37,C38,C44,C48,C51,C53,C54,C56,C59,C63,C68,C73,C74,C78,C86,C87,C9,D2,D4
typical_cds_rare	Chr1	42712217	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	C40
typical_cds_rare	Chr1	42712221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B25,C20
typical_cds_rare	Chr1	42712223	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	5	B136,B23,C16,C17,C39
typical_cds_rare	Chr1	42712229	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	B136,B37,C16,C39
typical_cds_rare	Chr1	42712232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B117,C40,C87
lof_cds	Chr1	42712236	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B25
typical_cds_rare	Chr1	42712236	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B25
typical_cds_rare	Chr1	42712238	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B136,C16,C39
typical_cds_rare	Chr1	42712264	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	B78,B99,C37,C82
lof_cds	Chr1	42712276	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	61	A11,A13,A15,B10,B107,B109,B11,B113,B114,B120,B125,B13,B136,B140,B18,B2,B21,B25,B26,B27,B28,B41,B47,B48,B50,B55,B6,B66,B73,B85,B86,B89,B90,B94,C11,C16,C18,C21,C24,C29,C32,C35,C38,C39,C4,C46,C47,C48,C49,C5,C53,C55,C58,C59,C61,C65,C68,C7,C78,C82,D9
typical_cds_rare	Chr1	42712283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	C37
lof_cds	Chr1	42712288	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B136,C16,C39
typical_cds_rare	Chr1	42712288	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	3	B136,C16,C39
typical_cds_rare	Chr1	42712309	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	5	B102,B124,B18,B61,B85
typical_cds_rare	Chr1	42712322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B22
typical_cds_rare	Chr1	42712329	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	C7
typical_cds_rare	Chr1	42712337	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	B124,B87,C78,D9
lof_cds	Chr1	42712348	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D10
typical_cds_rare	Chr1	42712348	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D10
lof_cds	Chr1	42712351	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D10
typical_cds_rare	Chr1	42712351	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D10
lof_cds	Chr1	42712353	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D10
typical_cds_rare	Chr1	42712353	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	D10
lof_cds	Chr1	42712359	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B31
typical_cds_rare	Chr1	42712359	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	1	B31
typical_cds_rare	Chr1	42712360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	2	B125,B74
typical_cds_rare	Chr1	42712361	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008307	SmilChr01G002495	131008307	rna-XM_057935197.1	4	B125,B72,B74,D10