source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	45026127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B18,B37,B79,B86
typical_cds_rare	Chr1	45026169	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	5	B18,B23,B95,C37,C48
typical_cds_rare	Chr1	45026190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	3	B105,B75,D5
lof_cds	Chr1	45026198	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	62	A1,A15,A20,A24,A25,A4,B10,B102,B106,B107,B108,B110,B113,B117,B118,B124,B13,B131,B134,B137,B19,B2,B29,B31,B36,B47,B49,B5,B53,B55,B56,B57,B62,B71,B81,B85,B88,C10,C16,C22,C23,C25,C26,C28,C29,C32,C33,C35,C37,C5,C50,C62,C68,C71,C74,C78,C83,C86,D1,D2,D3,D9
typical_cds_rare	Chr1	45026303	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	2	B56,B96
typical_cds_rare	Chr1	45026316	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B132
typical_cds_rare	Chr1	45026328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B129
typical_cds_rare	Chr1	45026362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	C80
typical_cds_rare	Chr1	45026387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	A23,B127,B44,C37
lof_cds	Chr1	45026777	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	2	C80,D5
typical_cds_rare	Chr1	45026777	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	2	C80,D5
lof_cds	Chr1	45026783	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B10,B12,B123,B29
typical_cds_rare	Chr1	45026783	CGA	C	INDEL	2bp_deletion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B10,B12,B123,B29
lof_cds	Chr1	45026790	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B10,B12,B123,B29
typical_cds_rare	Chr1	45026790	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B10,B12,B123,B29
typical_cds_rare	Chr1	45026799	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	2	B12,B123
typical_cds_rare	Chr1	45026806	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	3	B12,B121,B123
typical_cds_rare	Chr1	45026813	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B38
lof_cds	Chr1	45026819	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	3	B12,B121,B123
typical_cds_rare	Chr1	45026819	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	3	B12,B121,B123
lof_cds	Chr1	45026823	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B12,B121,B123,B42
typical_cds_rare	Chr1	45026823	TGC	T	INDEL	2bp_deletion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B12,B121,B123,B42
lof_cds	Chr1	45026852	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B42
typical_cds_rare	Chr1	45026852	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B42
lof_cds	Chr1	45026867	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	3	B1,B76,C71
typical_cds_rare	Chr1	45026867	CT	C	INDEL	1bp_deletion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	3	B1,B76,C71
lof_cds	Chr1	45026919	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	14	A16,B108,B120,B128,B131,B18,B32,B49,B7,B97,C30,C31,C46,C58
typical_cds_rare	Chr1	45026946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	2	B133,B44
typical_cds_rare	Chr1	45026949	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	5	B12,B121,B93,C60,D10
typical_cds_rare	Chr1	45026952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B40
typical_cds_rare	Chr1	45026966	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	2	B4,C36
lof_cds	Chr1	45026992	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B123
typical_cds_rare	Chr1	45026992	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B123
lof_cds	Chr1	45026993	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	176	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A5,A6,A8,A9,B1,B10,B100,B101,B102,B103,B106,B107,B108,B109,B11,B111,B112,B114,B115,B117,B118,B119,B120,B126,B128,B131,B132,B133,B134,B136,B137,B14,B16,B17,B18,B2,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B33,B34,B35,B36,B37,B38,B4,B41,B42,B43,B44,B46,B47,B48,B49,B5,B50,B51,B52,B54,B56,B58,B6,B60,B62,B63,B64,B65,B66,B67,B69,B7,B71,B73,B74,B75,B76,B78,B79,B80,B84,B86,B87,B90,B91,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C15,C16,C2,C20,C21,C22,C23,C24,C25,C26,C3,C30,C31,C32,C33,C39,C4,C41,C42,C43,C44,C45,C47,C49,C52,C53,C55,C57,C58,C59,C6,C60,C62,C63,C64,C65,C67,C68,C69,C71,C73,C74,C75,C78,C79,C8,C80,C81,C83,C84,C86,D1,D10,D3,D6,D7
lof_cds	Chr1	45026999	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	180	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A5,A6,A8,A9,B1,B10,B100,B101,B102,B103,B106,B107,B108,B109,B11,B111,B112,B114,B115,B117,B118,B119,B120,B123,B126,B128,B131,B132,B133,B134,B136,B137,B14,B16,B17,B18,B2,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B33,B34,B35,B36,B37,B38,B4,B41,B42,B43,B44,B46,B47,B48,B49,B5,B50,B51,B52,B54,B56,B58,B6,B60,B62,B63,B64,B65,B66,B67,B69,B7,B71,B73,B74,B75,B76,B78,B79,B80,B84,B86,B87,B90,B91,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C2,C20,C21,C22,C23,C24,C25,C26,C3,C31,C32,C33,C39,C4,C41,C42,C43,C44,C45,C47,C49,C5,C52,C53,C55,C56,C57,C58,C59,C6,C60,C62,C63,C64,C65,C67,C68,C69,C71,C73,C74,C75,C78,C79,C8,C80,C81,C83,C84,C86,D1,D10,D2,D3,D6,D7
typical_cds_rare	Chr1	45027014	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B1
lof_cds	Chr1	45027031	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	240	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B107,B108,B109,B11,B110,B111,B113,B114,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B84,B85,B86,B87,B88,B89,B9,B91,B92,B93,B94,B95,B97,B98,B99,C1,C10,C11,C12,C13,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C31,C32,C33,C34,C35,C36,C38,C39,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C71,C73,C74,C75,C76,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	45027108	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	2	A4,B28
lof_cds	Chr1	45027173	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	D5
typical_cds_rare	Chr1	45027173	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	D5
lof_cds	Chr1	45027210	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	10	B123,B132,B34,B59,B72,B93,C11,C48,C5,C55
lof_cds	Chr1	45027214	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	10	B123,B132,B34,B59,B72,B93,C11,C48,C5,C55
lof_cds	Chr1	45027219	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	C73
typical_cds_rare	Chr1	45027219	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	C73
lof_cds	Chr1	45027285	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B21
typical_cds_rare	Chr1	45027285	TA	T	INDEL	1bp_deletion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B21
typical_cds_rare	Chr1	45027292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B55,C20,C36,C81
typical_cds_rare	Chr1	45027314	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	4	B133,B9,C2,C47
typical_cds_rare	Chr1	45027356	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	C10
lof_cds	Chr1	45027381	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B97
typical_cds_rare	Chr1	45027381	T	TGC	INDEL	2bp_insertion	CDS_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	1	B97
lof_cds	Chr1	45027575	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC130985759	SmilChr01G002681	130985759	rna-XM_057908881.1	48	A10,A13,A19,A21,A3,A8,B100,B101,B106,B110,B111,B118,B122,B128,B137,B17,B2,B33,B37,B47,B54,B55,B63,B66,B72,B73,B76,B79,B86,B9,C12,C15,C21,C34,C41,C44,C46,C49,C55,C64,C70,C74,C75,C79,C84,D1,D7,D8