source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	46403670	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B107,B19,B33,B5
typical_cds_rare	Chr1	46403670	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B107,B19,B33,B5
typical_cds_rare	Chr1	46403698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B107,B19,B33,B5
typical_cds_rare	Chr1	46403720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	2	B74,D11
lof_cds	Chr1	46403737	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B16
typical_cds_rare	Chr1	46403737	CCA	C	INDEL	2bp_deletion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B16
lof_cds	Chr1	46403748	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B107,B19,B33,B5
typical_cds_rare	Chr1	46403748	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B107,B19,B33,B5
lof_cds	Chr1	46403752	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B107,B19,B33,B5
typical_cds_rare	Chr1	46403752	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B107,B19,B33,B5
typical_cds_rare	Chr1	46403796	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	B122,B49,B51,C49
typical_cds_rare	Chr1	46403814	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B16
typical_cds_rare	Chr1	46403824	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	3	B124,B49,B79
lof_cds	Chr1	46403828	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B16
typical_cds_rare	Chr1	46403828	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B16
lof_cds	Chr1	46403832	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B16
typical_cds_rare	Chr1	46403832	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B16
typical_cds_rare	Chr1	46403864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	B9
lof_cds	Chr1	46403874	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	7	B1,B112,B32,B63,C32,C63,C68
typical_cds_rare	Chr1	46403932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	3	B124,B40,C62
lof_cds	Chr1	46403935	A	AGC	INDEL	2bp_insertion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	2	C59,C84
typical_cds_rare	Chr1	46403935	A	AGC	INDEL	2bp_insertion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	2	C59,C84
typical_cds_rare	Chr1	46404075	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	2	C59,C84
lof_cds	Chr1	46404103	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	13	B10,B13,B29,B30,B5,B50,B75,B79,C20,C60,C82,D1,D7
lof_cds	Chr1	46404117	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	6	B106,B117,B37,B77,C11,C69
lof_cds	Chr1	46404130	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	60	A1,A16,A19,A20,A24,A3,A5,A7,A8,B109,B112,B115,B117,B134,B136,B18,B20,B22,B23,B27,B28,B29,B41,B45,B46,B59,B6,B70,B77,B81,B82,B83,B87,B90,B98,C11,C13,C16,C17,C24,C26,C36,C42,C48,C50,C52,C53,C54,C58,C59,C67,C69,C70,C77,C79,C8,C80,C82,D4,D5
lof_cds	Chr1	46404166	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	A7
typical_cds_rare	Chr1	46404166	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	A7
lof_cds	Chr1	46404174	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	A7
typical_cds_rare	Chr1	46404174	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	A7
lof_cds	Chr1	46404183	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	A7
typical_cds_rare	Chr1	46404183	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	A7
typical_cds_rare	Chr1	46404189	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	3	B35,C59,C84
typical_cds_rare	Chr1	46404196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	5	A11,A22,B101,C16,C43
lof_cds	Chr1	46404226	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	7	A7,B114,B42,B43,B91,C37,C77
lof_cds	Chr1	46404235	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	A19,B28,B90,C10
typical_cds_rare	Chr1	46404235	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	4	A19,B28,B90,C10
typical_cds_rare	Chr1	46404366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	1	C59
typical_cds_rare	Chr1	46404370	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	2	C59,C84
typical_cds_rare	Chr1	46404433	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008911	SmilChr01G002791	131008911	rna-XM_057936026.1	3	A5,B53,C24