source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	46570979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B75
typical_cds_rare	Chr1	46570988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B30,B75
typical_cds_rare	Chr1	46571207	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	4	B126,B61,B65,C37
typical_cds_rare	Chr1	46571238	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	3	C35,C70,D9
typical_cds_rare	Chr1	46571247	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B16
typical_cds_rare	Chr1	46571283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B21
typical_cds_rare	Chr1	46571344	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	D6
typical_cds_rare	Chr1	46571398	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	3	B1,B22,B98
typical_cds_rare	Chr1	46571415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B1,B22
typical_cds_rare	Chr1	46571417	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B1,B22
typical_cds_rare	Chr1	46571418	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	D11
typical_cds_rare	Chr1	46571421	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B1,B22
typical_cds_rare	Chr1	46571434	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B22
lof_cds	Chr1	46571569	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B33,B66
typical_cds_rare	Chr1	46571569	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B33,B66
lof_cds	Chr1	46571571	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B33,B66
typical_cds_rare	Chr1	46571571	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B33,B66
typical_cds_rare	Chr1	46571617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B32
typical_cds_rare	Chr1	46571675	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B129
typical_cds_rare	Chr1	46571717	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B33,B66
typical_cds_rare	Chr1	46571797	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	A19
lof_cds	Chr1	46571843	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B60
typical_cds_rare	Chr1	46571843	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B60
typical_cds_rare	Chr1	46571969	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	D11
typical_cds_rare	Chr1	46572012	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	A4
typical_cds_rare	Chr1	46572039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	C82
typical_cds_rare	Chr1	46572076	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B129
typical_cds_rare	Chr1	46572095	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	A18
typical_cds_rare	Chr1	46572123	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B80
typical_cds_rare	Chr1	46572137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B30,C19
typical_cds_rare	Chr1	46572184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B11,B114
typical_cds_rare	Chr1	46572190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	4	B40,B56,B96,C30
lof_cds	Chr1	46572217	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	33	A14,A8,B11,B111,B114,B121,B127,B128,B130,B134,B26,B40,B49,B56,B61,B65,B94,B96,B97,C15,C18,C30,C31,C35,C37,C42,C46,C53,C56,C59,C67,C69,D11
typical_cds_rare	Chr1	46572227	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B2,C35
typical_cds_rare	Chr1	46572263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	4	B103,C2,C25,C35
typical_cds_rare	Chr1	46572278	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	4	B140,B53,B90,D8
typical_cds_rare	Chr1	46572298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	4	B140,B53,B90,D8
typical_cds_rare	Chr1	46572474	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B104
typical_cds_rare	Chr1	46572488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B105
typical_cds_rare	Chr1	46572533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	B129
typical_cds_rare	Chr1	46572581	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	2	B33,B66
typical_cds_rare	Chr1	46572657	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	3	B130,B26,C10
typical_cds_rare	Chr1	46572689	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	3	A23,B128,B89
typical_cds_rare	Chr1	46572693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	4	A23,B128,B129,B89
typical_cds_rare	Chr1	46572706	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	3	A23,B128,B89
typical_cds_rare	Chr1	46572722	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	3	A23,B128,B89
typical_cds_rare	Chr1	46572734	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	3	A23,B128,B89
typical_cds_rare	Chr1	46572770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	1	C82
lof_cds	Chr1	46572784	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	251	A1,A10,A11,A13,A14,A15,A16,A18,A19,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B126,B128,B129,B13,B130,B131,B132,B133,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr1	46572789	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC130987049	SmilChr01G002803	130987049	rna-XM_057910608.1	253	A1,A10,A11,A13,A14,A15,A16,A18,A19,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B128,B129,B13,B130,B131,B132,B133,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9