source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	46661051	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	C42
lof_cds	Chr1	46661054	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B104
typical_cds_rare	Chr1	46661054	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B104
typical_cds_rare	Chr1	46661066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	B8,C83
typical_cds_rare	Chr1	46661074	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	B104,B129
typical_cds_rare	Chr1	46661109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	B111,B62
typical_cds_rare	Chr1	46661115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B104
typical_cds_rare	Chr1	46661116	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	C33
typical_cds_rare	Chr1	46661246	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	5	A14,B108,B15,B28,C23
typical_cds_rare	Chr1	46661270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	B108,C23
lof_cds	Chr1	46661329	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	8	B15,B3,B52,B70,C13,C15,C68,C77
lof_cds	Chr1	46661334	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B60
typical_cds_rare	Chr1	46661334	C	CG	INDEL	1bp_insertion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B60
typical_cds_rare	Chr1	46661363	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	5	B3,B52,C13,C68,C77
lof_cds	Chr1	46661376	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	4	B132,C18,C39,C71
typical_cds_rare	Chr1	46661376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	4	B132,C18,C39,C71
lof_cds	Chr1	46661389	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A7,B117,B91
typical_cds_rare	Chr1	46661389	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A7,B117,B91
lof_cds	Chr1	46661394	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A7,B117,B91
typical_cds_rare	Chr1	46661394	G	GGA	INDEL	2bp_insertion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A7,B117,B91
typical_cds_rare	Chr1	46661400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	B41,C2
typical_cds_rare	Chr1	46661424	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	5	A2,B18,B47,C35,C80
typical_cds_rare	Chr1	46661431	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	C35
lof_cds	Chr1	46661482	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	21	B110,B124,B131,B133,B22,B30,B52,B58,B63,B66,B7,B80,B98,C18,C31,C35,C38,C42,C48,C59,C80
lof_cds	Chr1	46661487	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	15	B124,B131,B133,B22,B30,B58,B63,B66,B7,B80,B98,C18,C42,C48,C59
lof_cds	Chr1	46661488	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	19	B110,B124,B131,B133,B22,B30,B52,B58,B63,B66,B7,B80,B98,C35,C38,C42,C48,C59,C80
typical_cds_rare	Chr1	46661506	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B111
typical_cds_rare	Chr1	46661511	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A14,B15,C23
lof_cds	Chr1	46661518	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	10	B131,B22,B30,B63,B7,B80,C42,C48,C55,C59
lof_cds	Chr1	46661532	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	A19,B94
typical_cds_rare	Chr1	46661532	GA	G	INDEL	1bp_deletion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	A19,B94
lof_cds	Chr1	46661538	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	18	A6,B131,B23,B30,B47,B52,B63,B65,C22,C29,C3,C34,C35,C38,C42,C48,C80,C87
lof_cds	Chr1	46661553	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B131
typical_cds_rare	Chr1	46661553	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B131
lof_cds	Chr1	46661554	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	12	A6,B23,B47,B52,B65,C22,C29,C3,C35,C38,C80,C87
typical_cds_rare	Chr1	46661556	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A14,B15,C23
typical_cds_rare	Chr1	46661559	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	4	A2,B108,C23,D4
lof_cds	Chr1	46661562	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	118	A10,A11,A14,A18,A2,A21,A23,A24,A25,A4,A7,A8,A9,B1,B101,B103,B106,B113,B115,B118,B119,B12,B120,B125,B126,B127,B128,B129,B132,B136,B138,B139,B140,B15,B17,B19,B20,B24,B25,B31,B33,B37,B38,B39,B41,B5,B50,B53,B56,B62,B64,B66,B67,B69,B7,B70,B71,B74,B76,B78,B8,B85,B87,B88,B89,B9,B90,B91,B92,B94,B95,B96,B97,B99,C1,C10,C19,C2,C21,C24,C26,C27,C28,C30,C31,C33,C36,C38,C4,C40,C41,C45,C46,C48,C49,C5,C50,C51,C56,C57,C6,C61,C62,C64,C65,C66,C73,C74,C78,C79,C83,C87,D11,D2,D3,D5,D7,D9
lof_cds	Chr1	46661567	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	117	A10,A11,A14,A18,A2,A21,A23,A24,A25,A4,A7,A8,A9,B1,B101,B103,B106,B113,B115,B118,B119,B12,B120,B125,B126,B127,B128,B129,B132,B136,B138,B139,B140,B15,B17,B19,B20,B24,B25,B31,B33,B37,B38,B39,B41,B5,B50,B53,B56,B62,B64,B66,B67,B69,B7,B70,B71,B74,B76,B78,B8,B85,B87,B88,B89,B9,B90,B91,B92,B94,B95,B96,B97,B99,C1,C10,C19,C2,C21,C24,C26,C27,C28,C30,C31,C33,C36,C38,C4,C40,C41,C45,C46,C48,C49,C5,C50,C51,C56,C57,C6,C61,C62,C64,C65,C73,C74,C78,C79,C83,C87,D11,D2,D3,D5,D7,D9
lof_cds	Chr1	46661577	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A6,B47,C34
typical_cds_rare	Chr1	46661577	G	GC	INDEL	1bp_insertion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	3	A6,B47,C34
lof_cds	Chr1	46661587	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	13	A6,B110,B23,B47,B57,B65,C29,C3,C34,C35,C38,C80,C87
lof_cds	Chr1	46661601	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	A6,C34
typical_cds_rare	Chr1	46661601	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	A6,C34
lof_cds	Chr1	46661603	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	7	B23,B57,B65,C29,C3,C35,C87
typical_cds_rare	Chr1	46661606	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	B110,C80
lof_cds	Chr1	46661607	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	9	A6,B23,B57,B65,C29,C3,C34,C35,C87
typical_cds_rare	Chr1	46661629	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	1	B41
typical_cds_rare	Chr1	46661633	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987124	SmilChr01G002811	130987124	rna-XM_057910741.1	2	C35,C87