source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	46663318	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B122,C74
lof_cds	Chr1	46663341	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	A10,A4
typical_cds_rare	Chr1	46663341	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	A10,A4
lof_cds	Chr1	46663344	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	A10,A4
typical_cds_rare	Chr1	46663344	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	A10,A4
typical_cds_rare	Chr1	46663361	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	A4
typical_cds_rare	Chr1	46663447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	4	B12,B78,C41,C61
lof_cds	Chr1	46663466	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	22	A1,A10,A4,B109,B112,B12,B128,B13,B132,B54,B64,B67,B69,B78,C17,C30,C39,C41,C42,C5,C61,C63
typical_cds_rare	Chr1	46663543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	4	A4,B108,B13,C5
typical_cds_rare	Chr1	46663555	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C5
typical_cds_rare	Chr1	46663581	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C5
typical_cds_rare	Chr1	46663589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C16
lof_cds	Chr1	46663604	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	B41
typical_cds_rare	Chr1	46663604	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	B41
typical_cds_rare	Chr1	46663609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B41,C5
typical_cds_rare	Chr1	46663625	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C16
lof_cds	Chr1	46663650	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C5
typical_cds_rare	Chr1	46663650	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C5
typical_cds_rare	Chr1	46663660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C5
typical_cds_rare	Chr1	46663666	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C5
typical_cds_rare	Chr1	46663685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	B41
typical_cds_rare	Chr1	46663750	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	3	B138,C31,C69
typical_cds_rare	Chr1	46663759	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	4	B78,C16,C72,D7
typical_cds_rare	Chr1	46663769	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	3	B78,C16,C72
typical_cds_rare	Chr1	46663785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	B15
typical_cds_rare	Chr1	46663801	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B14,D7
lof_cds	Chr1	46663826	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B59,C74
typical_cds_rare	Chr1	46663826	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B59,C74
typical_cds_rare	Chr1	46663859	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B127,B72
typical_cds_rare	Chr1	46663880	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	5	A13,B13,B130,C24,C64
lof_cds	Chr1	46663987	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	3	B5,B95,C79
typical_cds_rare	Chr1	46663987	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	3	B5,B95,C79
lof_cds	Chr1	46663992	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	3	B5,B95,C79
typical_cds_rare	Chr1	46663992	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	3	B5,B95,C79
lof_cds	Chr1	46664016	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B42,B43
typical_cds_rare	Chr1	46664016	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B42,B43
lof_cds	Chr1	46664019	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	123	A1,A11,A13,A16,A18,A2,A20,A3,A4,A5,A9,B102,B104,B107,B108,B11,B110,B112,B113,B114,B115,B117,B121,B122,B125,B126,B128,B13,B130,B131,B133,B135,B14,B140,B15,B17,B18,B2,B21,B24,B27,B29,B3,B33,B34,B35,B36,B37,B4,B40,B41,B42,B43,B44,B45,B46,B47,B51,B53,B56,B57,B58,B59,B63,B65,B67,B68,B71,B72,B74,B76,B78,B82,B85,B86,B87,B9,B90,B92,B93,B96,B99,C1,C14,C16,C19,C2,C20,C21,C23,C24,C25,C27,C29,C3,C33,C37,C39,C41,C43,C44,C45,C46,C47,C52,C53,C62,C63,C64,C66,C71,C72,C74,C78,C79,C82,C86,C87,D11,D3,D6,D7,D8
typical_cds_rare	Chr1	46664041	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	4	A23,B118,B128,C48
typical_cds_rare	Chr1	46664059	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	4	A10,B127,B135,C72
lof_cds	Chr1	46664081	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	86	A13,A14,A18,A20,A21,A23,A5,A7,A9,B101,B102,B110,B114,B117,B12,B122,B127,B129,B135,B14,B15,B2,B24,B28,B30,B33,B35,B36,B37,B38,B39,B42,B43,B48,B5,B52,B53,B56,B58,B61,B62,B63,B64,B69,B71,B72,B74,B75,B8,B91,B94,B95,B96,C11,C18,C2,C20,C23,C24,C28,C30,C33,C38,C4,C40,C47,C5,C54,C56,C62,C67,C68,C69,C72,C76,C77,C79,C8,C83,C84,C86,D10,D11,D3,D6,D8
lof_cds	Chr1	46664090	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	6	B33,B43,C11,C32,C68,C69
typical_cds_rare	Chr1	46664093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	3	B120,B62,D11
lof_cds	Chr1	46664122	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B120,D10
typical_cds_rare	Chr1	46664122	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B120,D10
typical_cds_rare	Chr1	46664165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	D11
typical_cds_rare	Chr1	46664192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	4	A2,B120,B62,C23
lof_cds	Chr1	46664203	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	99	A1,A13,A14,A15,A18,A21,A23,A24,A5,A7,A8,B10,B101,B102,B107,B117,B12,B120,B122,B125,B127,B129,B132,B134,B139,B2,B21,B24,B27,B28,B3,B30,B33,B35,B36,B38,B39,B42,B43,B5,B56,B58,B61,B62,B67,B69,B71,B74,B75,B76,B81,B83,B85,B88,B9,B94,B95,B96,B99,C10,C11,C13,C18,C20,C22,C23,C27,C28,C30,C32,C33,C36,C37,C38,C40,C43,C47,C48,C5,C55,C56,C58,C59,C6,C62,C63,C68,C69,C7,C76,C77,C8,C83,C84,C85,D1,D10,D3,D8
lof_cds	Chr1	46664210	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B107,B130
typical_cds_rare	Chr1	46664210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	2	B107,B130
lof_cds	Chr1	46664263	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	135	A1,A10,A16,A2,A21,A22,A25,A3,A4,A5,A9,B1,B10,B103,B105,B106,B108,B109,B11,B113,B114,B115,B118,B119,B12,B120,B125,B126,B128,B13,B130,B134,B135,B136,B137,B138,B14,B15,B17,B18,B2,B20,B23,B24,B25,B28,B31,B32,B34,B36,B37,B40,B41,B42,B44,B50,B51,B52,B54,B56,B57,B59,B63,B64,B65,B70,B71,B72,B73,B74,B77,B8,B82,B85,B86,B87,B9,B90,B91,B94,B95,B97,C1,C10,C12,C14,C19,C2,C20,C21,C22,C25,C26,C27,C28,C29,C30,C31,C33,C34,C35,C38,C39,C4,C40,C42,C44,C45,C46,C49,C50,C51,C52,C54,C57,C6,C60,C61,C62,C63,C65,C67,C71,C73,C74,C78,C82,C86,C9,D2,D3,D4,D5,D6,D9
lof_cds	Chr1	46664264	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	128	A1,A16,A18,A2,A20,A22,A3,A4,A5,A9,B102,B108,B11,B110,B112,B113,B114,B115,B119,B12,B120,B121,B123,B125,B126,B128,B13,B130,B131,B133,B134,B135,B138,B14,B140,B15,B16,B17,B18,B2,B24,B27,B28,B29,B31,B33,B34,B36,B37,B40,B41,B42,B43,B44,B45,B47,B53,B56,B57,B59,B6,B63,B65,B66,B68,B7,B71,B73,B74,B78,B82,B85,B86,B9,B90,B92,B93,B95,B97,C1,C10,C14,C16,C19,C2,C20,C21,C24,C25,C26,C27,C28,C29,C3,C33,C38,C39,C40,C41,C43,C44,C45,C46,C52,C53,C57,C59,C62,C63,C64,C67,C70,C71,C72,C74,C78,C79,C81,C82,C86,C87,D11,D2,D3,D4,D5,D6,D7
lof_cds	Chr1	46664267	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	57	A14,A15,A24,A7,A8,B101,B104,B107,B111,B117,B12,B125,B129,B132,B139,B2,B28,B3,B30,B36,B38,B39,B5,B58,B62,B67,B71,B75,B83,B88,B95,B96,B99,C13,C18,C20,C27,C28,C32,C36,C47,C48,C5,C55,C56,C63,C68,C69,C7,C75,C76,C8,C83,C84,D1,D10,D8
typical_cds_rare	Chr1	46664285	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	A10
typical_cds_rare	Chr1	46664305	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C82
lof_cds	Chr1	46664314	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	B104
typical_cds_rare	Chr1	46664314	C	CTA	INDEL	2bp_insertion	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	B104
typical_cds_rare	Chr1	46664715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008935	SmilChr01G002812	131008935	rna-XM_057936059.1	1	C3