source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	47120809	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	B126
typical_cds_rare	Chr1	47120872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B126,C87
typical_cds_rare	Chr1	47120879	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	A3,B2,B33,B66
typical_cds_rare	Chr1	47120880	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	A18,C60,C76
lof_cds	Chr1	47120904	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	17	A11,B101,B136,B43,B58,B65,B78,B97,C16,C29,C31,C32,C48,C57,C61,C68,D2
lof_cds	Chr1	47120919	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	32	A20,A23,B100,B103,B109,B112,B120,B123,B128,B24,B28,B31,B4,B46,B56,B58,B63,B69,B84,B96,C1,C32,C37,C4,C43,C50,C57,C68,C72,C77,C81,C83
typical_cds_rare	Chr1	47120950	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B34,C30
typical_cds_rare	Chr1	47121079	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	C30
lof_cds	Chr1	47121117	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	29	A16,A20,A25,A5,B112,B119,B121,B122,B125,B24,B3,B31,B35,B47,B54,B63,B78,B85,B90,B92,B98,C14,C33,C61,C74,C78,C83,D1,D3
lof_cds	Chr1	47121126	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	29	A16,A20,A25,A5,B112,B119,B121,B122,B125,B24,B3,B31,B35,B47,B54,B63,B78,B85,B90,B92,B98,C14,C33,C61,C74,C78,C83,D1,D3
lof_cds	Chr1	47121140	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B98,C60
typical_cds_rare	Chr1	47121140	C	CA	INDEL	1bp_insertion	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B98,C60
typical_cds_rare	Chr1	47121207	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B110,B16,C22
typical_cds_rare	Chr1	47121254	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	C15
lof_cds	Chr1	47121259	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	13	A10,A22,A3,A7,B105,B42,B49,B52,C38,C74,C76,D5,D9
typical_cds_rare	Chr1	47121321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B100,C83
typical_cds_rare	Chr1	47121489	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	C12
typical_cds_rare	Chr1	47121500	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	B140,C37,C38,C76
typical_cds_rare	Chr1	47121501	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	A23
typical_cds_rare	Chr1	47121522	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	D10
lof_cds	Chr1	47121665	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	9	B130,B34,B40,B9,B91,C23,C24,C30,C87
lof_cds	Chr1	47121685	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B44,C64,C66
typical_cds_rare	Chr1	47121685	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B44,C64,C66
typical_cds_rare	Chr1	47121699	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	B129
typical_cds_rare	Chr1	47121701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	B2
lof_cds	Chr1	47121724	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	13	B1,B117,B129,B132,B29,B48,B7,B74,C39,C44,C65,C82,D5
lof_cds	Chr1	47121753	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	67	A13,A16,A3,A8,B10,B101,B102,B105,B106,B11,B113,B119,B12,B128,B13,B131,B140,B15,B16,B19,B23,B24,B27,B38,B42,B43,B44,B5,B58,B59,B61,B64,B65,B66,B67,B70,B75,B76,B78,B79,B90,B91,B92,B97,C13,C16,C21,C26,C29,C3,C31,C32,C33,C35,C41,C47,C48,C49,C50,C55,C57,C6,C68,C73,C75,D3,D6
typical_cds_rare	Chr1	47121922	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	A18,B68
typical_cds_rare	Chr1	47122087	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B140,C37,C60
typical_cds_rare	Chr1	47122110	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B132,B64,C24
typical_cds_rare	Chr1	47122167	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	B20,B43,B50,D11
typical_cds_rare	Chr1	47122254	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	B131,B59,B88,D9
lof_cds	Chr1	47122466	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	B27
typical_cds_rare	Chr1	47122466	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	B27
lof_cds	Chr1	47122468	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B85,C14,D7
typical_cds_rare	Chr1	47122468	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B85,C14,D7
typical_cds_rare	Chr1	47122478	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	B35,B66,C78,C8
typical_cds_rare	Chr1	47122479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B119,C33
typical_cds_rare	Chr1	47122513	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	B114,B130,B139,C86
typical_cds_rare	Chr1	47122630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	C11
lof_cds	Chr1	47122717	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B98,C53
typical_cds_rare	Chr1	47122717	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B98,C53
lof_cds	Chr1	47122995	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	D10
typical_cds_rare	Chr1	47122995	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	D10
typical_cds_rare	Chr1	47123053	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	B108,B123,B68,D5
typical_cds_rare	Chr1	47123091	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	1	A4
typical_cds_rare	Chr1	47123125	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	2	B64,C24
typical_cds_rare	Chr1	47123213	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	4	A2,B20,B50,D11
typical_cds_rare	Chr1	47123237	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130987641	SmilChr01G002853	130987641	rna-XM_057911242.1	3	B75,C39,C42