source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	49450911	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	C17,C7,C84,D3
lof_cds	Chr1	49450924	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	9	A23,B124,B139,B18,B23,B30,B54,B87,C50
typical_cds_rare	Chr1	49450929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	B11,B16,B18,C15,C3
lof_cds	Chr1	49450930	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	6	A1,B25,C17,C7,C84,D3
typical_cds_rare	Chr1	49450932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B26,B59
typical_cds_rare	Chr1	49450933	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B26,B59
lof_cds	Chr1	49450937	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B73,C76
typical_cds_rare	Chr1	49450937	C	CT	INDEL	1bp_insertion	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B73,C76
typical_cds_rare	Chr1	49450941	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	C17,C7
typical_cds_rare	Chr1	49450943	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	3	B101,C30,C33
typical_cds_rare	Chr1	49450954	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	B111,B120,B91,C24,C68
typical_cds_rare	Chr1	49450956	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	B26,B59,B73,C3,C76
typical_cds_rare	Chr1	49450971	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	3	B47,C43,D8
typical_cds_rare	Chr1	49450974	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B80,B97,C83,C87
typical_cds_rare	Chr1	49450975	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B124,B18
typical_cds_rare	Chr1	49450978	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	A6,B60,C55,C72
typical_cds_rare	Chr1	49451012	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	3	B25,B70,C20
typical_cds_rare	Chr1	49451025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	B133,B2,B65,C10,D11
lof_cds	Chr1	49451035	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	21	A2,A25,B1,B11,B120,B35,B36,B5,B60,B86,B94,C12,C15,C18,C30,C36,C49,C76,C78,C80,D8
lof_cds	Chr1	49451056	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	160	A15,A16,A19,A2,A20,A24,A25,A3,A6,B10,B101,B103,B106,B107,B11,B112,B113,B117,B118,B119,B123,B125,B126,B127,B129,B13,B130,B131,B132,B134,B135,B138,B14,B140,B15,B17,B18,B19,B2,B23,B24,B25,B26,B27,B29,B3,B30,B31,B33,B34,B35,B36,B37,B38,B41,B42,B44,B46,B47,B48,B5,B52,B53,B55,B56,B58,B6,B60,B61,B65,B66,B67,B68,B70,B71,B72,B73,B75,B76,B78,B79,B80,B81,B82,B83,B86,B90,B91,B92,B95,B96,B97,B98,C1,C12,C13,C15,C16,C17,C18,C19,C2,C21,C23,C24,C26,C3,C30,C34,C35,C36,C37,C39,C4,C40,C43,C44,C45,C46,C47,C48,C49,C5,C50,C56,C57,C58,C60,C61,C62,C64,C65,C66,C67,C68,C7,C71,C72,C73,C75,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C87,C9,D10,D11,D3,D4,D6,D7,D8,D9
typical_cds_rare	Chr1	49451066	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B4,B42,C26,C54
typical_cds_rare	Chr1	49451067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	A20,A23,B117,B67
lof_cds	Chr1	49451069	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	6	A9,B39,B4,B73,C76,D6
typical_cds_rare	Chr1	49451098	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	A10,B4,C76,D6
lof_cds	Chr1	49451105	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	177	A13,A14,A15,A16,A19,A2,A20,A22,A24,A25,A3,A6,B10,B101,B103,B104,B106,B107,B108,B109,B11,B112,B113,B117,B118,B119,B123,B124,B125,B126,B127,B129,B13,B130,B131,B132,B133,B134,B135,B138,B14,B140,B15,B17,B18,B19,B2,B23,B24,B25,B26,B27,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B41,B42,B44,B46,B47,B48,B5,B50,B52,B53,B55,B56,B58,B6,B60,B61,B64,B65,B66,B67,B68,B70,B71,B72,B73,B74,B75,B76,B78,B79,B80,B81,B82,B83,B86,B91,B92,B95,B96,B98,C1,C12,C13,C15,C16,C17,C18,C19,C2,C21,C23,C24,C25,C26,C27,C28,C3,C30,C33,C34,C35,C36,C37,C38,C39,C4,C40,C43,C44,C45,C46,C47,C48,C49,C5,C50,C56,C57,C58,C6,C60,C61,C62,C64,C65,C66,C67,C68,C7,C71,C72,C73,C75,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C87,C9,D10,D11,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	49451172	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B56,B96
typical_cds_rare	Chr1	49451214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B112,B31,B5,C50
typical_cds_rare	Chr1	49451287	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	B123,B40,B42,B43,B48
lof_cds	Chr1	49451290	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	191	A11,A13,A14,A15,A18,A19,A2,A20,A21,A22,A24,A25,A3,A6,A7,B10,B103,B104,B105,B107,B108,B109,B11,B110,B111,B112,B113,B118,B119,B12,B124,B125,B126,B127,B128,B129,B13,B131,B133,B134,B136,B137,B138,B14,B140,B15,B16,B17,B18,B19,B2,B20,B24,B25,B26,B27,B29,B3,B30,B31,B33,B34,B35,B36,B37,B38,B39,B40,B41,B42,B43,B44,B45,B46,B47,B48,B5,B50,B52,B53,B55,B56,B58,B59,B6,B60,B61,B63,B64,B65,B66,B67,B68,B70,B71,B72,B73,B74,B75,B76,B77,B78,B8,B80,B81,B82,B83,B89,B9,B90,B91,B92,B94,B95,B96,B97,B98,C1,C12,C13,C15,C17,C18,C19,C2,C20,C21,C24,C25,C26,C27,C28,C3,C30,C33,C34,C35,C37,C38,C39,C4,C40,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C52,C54,C56,C57,C58,C59,C6,C60,C61,C62,C64,C66,C67,C68,C71,C72,C73,C75,C76,C78,C79,C8,C80,C81,C82,C83,C84,C85,C87,C9,D10,D11,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	49451322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	A3,C62
typical_cds_rare	Chr1	49451346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	1	B101
lof_cds	Chr1	49451390	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B109,B121,B140,B90
typical_cds_rare	Chr1	49451390	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B109,B121,B140,B90
lof_cds	Chr1	49451393	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	29	A1,A10,A23,A6,B1,B102,B104,B115,B122,B136,B137,B138,B16,B24,B36,B5,B54,B76,B86,B93,B96,B97,C26,C29,C38,C45,C51,C54,C77
typical_cds_rare	Chr1	49451419	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	A20,A23,B67,B98,C48
typical_cds_rare	Chr1	49451421	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	3	A20,A23,B67
typical_cds_rare	Chr1	49451433	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	A3,C62
lof_cds	Chr1	49451491	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	14	A9,B109,B115,B120,B121,B130,B134,B140,B53,B78,C11,C33,C51,C63
typical_cds_rare	Chr1	49451516	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B47,B85,C26,C56
typical_cds_rare	Chr1	49451519	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	B21,B47,B85,C26,C56
typical_cds_rare	Chr1	49451544	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B8,C57
typical_cds_rare	Chr1	49451561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	A20,A8,B122,B18,C56
typical_cds_rare	Chr1	49451642	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B12,B122,C23,C54
typical_cds_rare	Chr1	49451653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	4	B12,B122,C23,C54
typical_cds_rare	Chr1	49451677	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	D3,D6
typical_cds_rare	Chr1	49451724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	2	B40,B48
lof_cds	Chr1	49451737	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	141	A1,A11,A14,A16,A18,A2,A20,A21,A3,A4,A5,A7,B1,B10,B101,B106,B110,B115,B117,B118,B119,B12,B120,B121,B122,B126,B129,B13,B130,B131,B132,B134,B137,B138,B15,B16,B17,B25,B27,B29,B3,B33,B34,B35,B36,B37,B38,B40,B41,B43,B46,B49,B5,B50,B51,B52,B53,B55,B57,B58,B6,B60,B61,B63,B65,B67,B69,B7,B70,B71,B72,B74,B75,B76,B8,B80,B82,B84,B87,B88,B9,B93,B98,B99,C12,C13,C14,C15,C16,C17,C18,C2,C20,C23,C24,C25,C27,C28,C29,C3,C35,C37,C38,C42,C44,C45,C47,C48,C49,C5,C51,C53,C54,C55,C56,C58,C59,C6,C60,C63,C65,C67,C69,C7,C70,C71,C72,C74,C76,C78,C80,C81,C82,C83,C84,C86,C9,D1,D10,D2,D5
lof_cds	Chr1	49451751	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	208	A1,A10,A11,A13,A14,A15,A16,A19,A20,A21,A22,A23,A25,A3,A4,A5,A7,A8,A9,B10,B100,B101,B102,B103,B104,B105,B107,B108,B109,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B15,B17,B18,B19,B2,B20,B21,B23,B25,B27,B28,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B47,B48,B5,B51,B52,B53,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B70,B71,B72,B73,B75,B77,B78,B79,B8,B80,B81,B82,B83,B85,B86,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C18,C19,C2,C21,C23,C25,C26,C27,C28,C29,C32,C34,C35,C36,C37,C38,C39,C41,C42,C44,C45,C46,C47,C5,C51,C53,C54,C56,C57,C58,C59,C6,C61,C62,C63,C64,C65,C66,C67,C68,C69,C70,C71,C72,C74,C75,C76,C78,C79,C8,C81,C83,C84,C85,C86,C87,C9,D1,D2,D3,D5,D6,D7,D8,D9
lof_cds	Chr1	49451797	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	123	A11,A14,A16,A18,A2,A20,A21,A22,A3,A4,A5,A7,A8,B1,B10,B101,B106,B112,B115,B117,B118,B119,B12,B120,B121,B129,B13,B130,B131,B132,B134,B138,B140,B15,B16,B17,B25,B27,B28,B33,B35,B37,B38,B4,B40,B41,B43,B45,B46,B49,B51,B53,B54,B57,B58,B6,B61,B62,B65,B69,B7,B70,B72,B74,B75,B76,B80,B82,B87,B88,B9,B90,B92,B93,B95,C12,C13,C14,C15,C16,C17,C18,C25,C27,C29,C33,C37,C38,C39,C41,C42,C45,C48,C49,C5,C54,C55,C56,C57,C58,C59,C60,C64,C65,C66,C7,C70,C71,C72,C76,C77,C78,C8,C80,C81,C83,C84,C86,C9,D1,D2,D4,D7
lof_cds	Chr1	49451812	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	20	A2,A8,B1,B10,B17,B25,B35,B38,B40,B49,B58,B6,B65,B82,C12,C29,C48,C55,C66,C76
typical_cds_rare	Chr1	49451828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	5	B12,B28,C14,C37,C41
typical_cds_rare	Chr1	49451913	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130989576	SmilChr01G003048	130989576	rna-XM_057913560.1	1	B25