source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	49516710	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B8
lof_cds	Chr1	49516712	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	18	A13,A9,B129,B14,B18,B2,B4,B52,B58,B73,B89,B91,C18,C19,C34,C51,C8,C87
typical_cds_rare	Chr1	49516717	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	5	B11,B123,B79,C39,D4
typical_cds_rare	Chr1	49516845	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	C43
typical_cds_rare	Chr1	49516857	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	3	B112,B82,C48
typical_cds_rare	Chr1	49516888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B55
typical_cds_rare	Chr1	49516896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	D3
typical_cds_rare	Chr1	49516918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	5	A9,B140,C17,C63,C75
typical_cds_rare	Chr1	49517031	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B104
lof_cds	Chr1	49517035	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	27	A16,A18,B11,B114,B118,B12,B132,B137,B2,B50,B65,B67,B71,B79,B82,B93,C18,C20,C26,C50,C73,C81,C86,C87,D4,D5,D8
lof_cds	Chr1	49517044	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	D10
typical_cds_rare	Chr1	49517044	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	D10
lof_cds	Chr1	49517046	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	69	A11,A15,A16,A19,A22,B1,B102,B105,B106,B107,B108,B117,B120,B122,B124,B127,B129,B130,B27,B28,B3,B35,B36,B39,B45,B46,B51,B57,B59,B62,B64,B70,B73,B75,B78,B81,B89,B9,B90,B92,B99,C1,C10,C12,C16,C20,C21,C27,C29,C30,C32,C33,C35,C36,C41,C42,C44,C51,C63,C64,C66,C67,C68,C74,C83,C86,D3,D8,D9
lof_cds	Chr1	49517197	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B63
typical_cds_rare	Chr1	49517197	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B63
lof_cds	Chr1	49517215	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	9	B11,B2,B50,B53,B71,B93,C20,C81,D8
typical_cds_rare	Chr1	49517261	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	4	B127,B67,B8,D10
typical_cds_rare	Chr1	49517267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	C82
lof_cds	Chr1	49517283	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	29	A1,A2,A21,A3,B10,B100,B119,B123,B126,B132,B18,B25,B4,B46,B47,B50,B55,B74,C11,C22,C33,C47,C60,C67,C69,C77,C80,C82,C85
lof_cds	Chr1	49517405	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	15	A13,A22,A9,B136,B31,B50,B6,B73,B88,C18,C51,C69,C80,C9,D8
typical_cds_rare	Chr1	49517420	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B140
typical_cds_rare	Chr1	49517448	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	A13,C60
typical_cds_rare	Chr1	49517449	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	B114,B53
typical_cds_rare	Chr1	49517461	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	5	A19,B123,B3,C15,C4
typical_cds_rare	Chr1	49517462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	B8,C75
typical_cds_rare	Chr1	49517463	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B8
lof_cds	Chr1	49517496	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	6	B107,B62,B95,C36,C42,D6
lof_cds	Chr1	49517502	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	6	B11,B2,B50,B53,B71,C20
lof_cds	Chr1	49517531	TTA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	59	A11,A15,A16,A20,A22,B102,B105,B106,B107,B108,B117,B120,B122,B124,B130,B134,B23,B27,B35,B38,B45,B46,B51,B59,B62,B64,B68,B70,B73,B75,B78,B89,B9,B90,B99,C10,C12,C13,C15,C16,C2,C20,C29,C30,C36,C41,C42,C44,C63,C64,C66,C67,C72,C74,C86,C9,D7,D8,D9
typical_cds_rare	Chr1	49517696	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	3	B129,C33,C83
typical_cds_rare	Chr1	49517711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B101
typical_cds_rare	Chr1	49517761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B101
typical_cds_rare	Chr1	49517863	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	B34,C29
typical_cds_rare	Chr1	49517961	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	A13,C60
lof_cds	Chr1	49518060	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	5	B135,B25,B35,B41,C61
typical_cds_rare	Chr1	49518060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	5	B135,B25,B35,B41,C61
typical_cds_rare	Chr1	49518183	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	A13,C60
typical_cds_rare	Chr1	49518206	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	B28,B72
typical_cds_rare	Chr1	49518225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	5	B135,B25,B35,B41,C61
typical_cds_rare	Chr1	49518226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	5	B135,B25,B35,B41,C61
typical_cds_rare	Chr1	49518229	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	C60
typical_cds_rare	Chr1	49518561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B101
typical_cds_rare	Chr1	49518565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B131
typical_cds_rare	Chr1	49518574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	4	B109,B131,B36,D4
typical_cds_rare	Chr1	49519145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	A13,C60
lof_cds	Chr1	49519166	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	34	A10,A13,B10,B103,B111,B137,B19,B33,B35,B53,B56,B60,B69,B7,B71,B72,B76,B80,B86,B96,B99,C13,C22,C28,C35,C45,C53,C54,C62,C7,C79,C84,D5,D7
lof_cds	Chr1	49519241	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	B8,C57
typical_cds_rare	Chr1	49519241	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	B8,C57
lof_cds	Chr1	49519507	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B32
typical_cds_rare	Chr1	49519507	C	CCT	INDEL	2bp_insertion	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B32
lof_cds	Chr1	49519516	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	A21
typical_cds_rare	Chr1	49519516	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	A21
typical_cds_rare	Chr1	49519647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	A13,C60
lof_cds	Chr1	49519652	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	33	A10,A13,B10,B103,B111,B118,B137,B19,B33,B35,B53,B60,B69,B7,B71,B72,B76,B80,B86,B96,B99,C22,C28,C35,C45,C53,C54,C62,C7,C79,C84,D5,D7
typical_cds_rare	Chr1	49519668	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	A7,C52
typical_cds_rare	Chr1	49519686	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	B101
typical_cds_rare	Chr1	49519950	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	3	B105,B8,C57
typical_cds_rare	Chr1	49520166	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	2	A14,B15
typical_cds_rare	Chr1	49520250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	C82
lof_cds	Chr1	49520273	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	11	B134,B139,B37,B4,B61,B87,B95,C21,C70,C76,D9
typical_cds_rare	Chr1	49520287	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	D10
typical_cds_rare	Chr1	49520288	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009330	SmilChr01G003067	131009330	rna-XM_057936634.1	1	D10