source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	49735584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	C75
lof_cds	Chr1	49735588	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	11	B113,B115,B39,B51,B75,C40,C42,C53,C55,C74,C9
lof_cds	Chr1	49735594	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	11	B113,B115,B39,B51,B75,C40,C42,C53,C55,C74,C9
typical_cds_rare	Chr1	49735623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	C87
typical_cds_rare	Chr1	49735629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	A22,B106,C11,C69
typical_cds_rare	Chr1	49735641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	5	A22,B108,B49,B58,C23
typical_cds_rare	Chr1	49735658	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B114
lof_cds	Chr1	49735668	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	67	A15,A18,A22,A24,A4,B1,B103,B105,B109,B115,B121,B123,B127,B129,B130,B136,B19,B3,B32,B34,B36,B37,B44,B45,B46,B47,B48,B50,B59,B61,B62,B66,B7,B77,B82,B85,B9,B91,B94,B97,C10,C19,C2,C26,C41,C43,C45,C51,C54,C55,C58,C60,C61,C63,C65,C70,C71,C74,C8,C81,C82,C9,D1,D11,D4,D7,D8
lof_cds	Chr1	49735669	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	66	A15,A18,A22,A24,A4,B1,B103,B105,B109,B115,B121,B123,B127,B129,B130,B136,B19,B3,B32,B34,B36,B37,B44,B45,B46,B47,B48,B50,B59,B61,B62,B66,B7,B77,B82,B85,B9,B91,B94,B97,C10,C19,C26,C41,C43,C45,C51,C54,C55,C58,C60,C61,C63,C65,C70,C71,C74,C8,C81,C82,C9,D1,D11,D4,D7,D8
typical_cds_rare	Chr1	49735678	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	C25,D6
typical_cds_rare	Chr1	49735680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	C33
lof_cds	Chr1	49735682	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B19
typical_cds_rare	Chr1	49735682	G	GGT	INDEL	2bp_insertion	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B19
lof_cds	Chr1	49735688	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B19
typical_cds_rare	Chr1	49735688	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B19
typical_cds_rare	Chr1	49735691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	B63,B74,C46
typical_cds_rare	Chr1	49735733	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	A10,D11
typical_cds_rare	Chr1	49735735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	B74,C13,C46,D7
typical_cds_rare	Chr1	49735753	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	B140,C59,C9
typical_cds_rare	Chr1	49735768	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B122
typical_cds_rare	Chr1	49735770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B108,C23
typical_cds_rare	Chr1	49735781	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	A22,B12,C27,C71
typical_cds_rare	Chr1	49735785	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	B56,B66,C28,C85
typical_cds_rare	Chr1	49735790	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B114,B23
typical_cds_rare	Chr1	49735791	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	5	A13,B121,B86,C39,D7
typical_cds_rare	Chr1	49735813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	A21,B125,D5
typical_cds_rare	Chr1	49735817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	B108,B8,C23
typical_cds_rare	Chr1	49735837	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B106,C8
typical_cds_rare	Chr1	49735847	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	B140,B30,C54,D1
typical_cds_rare	Chr1	49735860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	C38,D5
typical_cds_rare	Chr1	49735877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	B59,B63,B86,C53
typical_cds_rare	Chr1	49735882	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B82,C19
typical_cds_rare	Chr1	49735889	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	C1,D4
typical_cds_rare	Chr1	49735930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	5	A21,B108,C39,C74,D5
typical_cds_rare	Chr1	49735942	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B57
typical_cds_rare	Chr1	49735949	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	A18,B18,C42,C57
typical_cds_rare	Chr1	49735951	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	C18,C36
lof_cds	Chr1	49735953	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B65
typical_cds_rare	Chr1	49735953	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B65
typical_cds_rare	Chr1	49735960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B23,B4
typical_cds_rare	Chr1	49735972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B23,B4
typical_cds_rare	Chr1	49735983	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	5	B131,B59,B63,B86,C53
typical_cds_rare	Chr1	49735986	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	A3,B10,B29
typical_cds_rare	Chr1	49735994	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	D5
typical_cds_rare	Chr1	49736005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B82,C19
typical_cds_rare	Chr1	49736084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B91,C43
lof_cds	Chr1	49736091	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	7	B10,B109,B19,B24,B29,B58,C10
typical_cds_rare	Chr1	49736110	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B16
lof_cds	Chr1	49736111	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	30	A13,A19,A23,B10,B106,B107,B109,B12,B121,B19,B22,B34,B38,B39,B44,B5,B54,B55,B61,B62,B86,B91,C27,C34,C36,C39,C43,C77,C79,D7
typical_cds_rare	Chr1	49736117	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	5	B109,B33,B58,C14,C2
typical_cds_rare	Chr1	49736123	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	5	A21,B11,B125,C62,C7
typical_cds_rare	Chr1	49736124	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	2	B40,C60
lof_cds	Chr1	49736127	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	12	A23,A25,B128,B22,B48,C11,C12,C29,C40,C51,C69,D5
typical_cds_rare	Chr1	49736139	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	B16,B28,C19,C76
lof_cds	Chr1	49736142	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	A18,B18,C57
typical_cds_rare	Chr1	49736142	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	A18,B18,C57
typical_cds_rare	Chr1	49736152	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	A16,A8,B140,C35
typical_cds_rare	Chr1	49736162	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B63
typical_cds_rare	Chr1	49736173	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	C41
typical_cds_rare	Chr1	49736175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B66
typical_cds_rare	Chr1	49736186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	3	A15,C8,D1
lof_cds	Chr1	49737029	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	9	A2,A24,B56,B62,B94,B96,C23,C4,C86
typical_cds_rare	Chr1	49737031	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	5	A6,B115,B4,C14,C7
lof_cds	Chr1	49737041	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	24	A18,A19,A21,A7,B112,B123,B128,B13,B140,B17,B3,B35,B46,B69,B70,B86,C16,C21,C47,C55,C65,C66,C8,C82
typical_cds_rare	Chr1	49737046	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	4	B70,C16,C21,C65
lof_cds	Chr1	49737058	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	8	A5,B10,B129,B28,B32,B47,B83,C62
typical_cds_rare	Chr1	49737106	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990003	SmilChr01G003092	130990003	rna-XM_057914189.1	1	B37