source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	50943127	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	94	A13,A15,A18,A2,A22,A24,A25,A5,A9,B10,B103,B109,B113,B115,B119,B120,B127,B129,B13,B131,B132,B135,B136,B137,B138,B140,B19,B20,B26,B27,B29,B3,B30,B31,B33,B37,B38,B39,B4,B45,B48,B50,B54,B56,B58,B61,B64,B65,B67,B70,B76,B81,B84,B85,B88,B89,B94,C1,C11,C12,C13,C16,C17,C18,C19,C2,C20,C21,C22,C25,C26,C27,C30,C33,C35,C36,C43,C46,C49,C51,C52,C64,C66,C69,C78,C80,C85,C9,D10,D11,D2,D6,D7,D9
typical_cds_rare	Chr1	50943169	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B123
typical_cds_rare	Chr1	50943312	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B113
lof_cds	Chr1	50943343	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	10	A20,B91,B92,C52,C6,C60,C65,C79,C84,D3
lof_cds	Chr1	50943345	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	10	A20,B91,B92,C52,C6,C60,C65,C79,C84,D3
typical_cds_rare	Chr1	50943635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	4	B113,B124,C40,C65
typical_cds_rare	Chr1	50943828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B25,B28,B84,B98,C79
typical_cds_rare	Chr1	50943877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B78
lof_cds	Chr1	50943893	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	4	B121,B132,B17,C74
typical_cds_rare	Chr1	50943893	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	4	B121,B132,B17,C74
lof_cds	Chr1	50943896	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	4	B121,B132,B17,C74
typical_cds_rare	Chr1	50943896	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	4	B121,B132,B17,C74
lof_cds	Chr1	50943901	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B121
typical_cds_rare	Chr1	50943901	A	AG	INDEL	1bp_insertion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B121
typical_cds_rare	Chr1	50943954	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B123
typical_cds_rare	Chr1	50944042	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B9
typical_cds_rare	Chr1	50944050	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B18
lof_cds	Chr1	50944086	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	11	B105,B18,B28,B32,B46,B89,C34,C37,C8,D4,D8
typical_cds_rare	Chr1	50944099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B3
lof_cds	Chr1	50944128	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	17	A10,A7,B111,B130,B24,B28,B49,B60,B72,B80,B81,B86,B99,C7,C79,C84,C86
typical_cds_rare	Chr1	50944233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B123
lof_cds	Chr1	50944241	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	9	B28,B46,C14,C33,C34,C37,C74,C79,D4
typical_cds_rare	Chr1	50944253	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B55,B82,B86,C44,D10
lof_cds	Chr1	50944319	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	17	B122,B137,B14,B2,B38,B39,B47,B70,B71,B98,C15,C2,C45,C85,D10,D4,D9
typical_cds_rare	Chr1	50944528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B66,C39,D10
typical_cds_rare	Chr1	50944536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B66,C39,D10
lof_cds	Chr1	50944539	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B66,C39,D10
typical_cds_rare	Chr1	50944539	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B66,C39,D10
lof_cds	Chr1	50944540	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B66,B70,C39,C45,D10
typical_cds_rare	Chr1	50944540	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B66,B70,C39,C45,D10
lof_cds	Chr1	50944544	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B66,B70,C39,C45,D10
typical_cds_rare	Chr1	50944544	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B66,B70,C39,C45,D10
lof_cds	Chr1	50944549	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	C18,C49
typical_cds_rare	Chr1	50944549	G	GC	INDEL	1bp_insertion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	C18,C49
typical_cds_rare	Chr1	50944558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B39,B70,B98,C15,C45
typical_cds_rare	Chr1	50944628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	C45
lof_cds	Chr1	50944639	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	25	A18,B105,B12,B128,B132,B135,B15,B16,B17,B18,B26,B28,B32,B46,B49,B75,B89,C14,C21,C23,C74,C79,C8,D4,D8
typical_cds_rare	Chr1	50944656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B18,C23
typical_cds_rare	Chr1	50944670	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B18,C23
lof_cds	Chr1	50944756	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	8	B131,B55,B66,B82,B86,C39,C44,D10
lof_cds	Chr1	50944760	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	8	B131,B55,B66,B82,B86,C39,C44,D10
lof_cds	Chr1	50944768	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	8	B131,B55,B66,B82,B86,C39,C44,D10
lof_cds	Chr1	50944775	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	8	B131,B55,B66,B82,B86,C39,C44,D10
lof_cds	Chr1	50944829	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B121,B44
typical_cds_rare	Chr1	50944829	GC	G	INDEL	1bp_deletion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B121,B44
lof_cds	Chr1	50944852	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	8	A2,B19,B89,B94,B96,C21,C55,C60
lof_cds	Chr1	50944856	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B94,C26,C60
typical_cds_rare	Chr1	50944856	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B94,C26,C60
typical_cds_rare	Chr1	50944867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B55,B86,C39
lof_cds	Chr1	50944868	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B19,C21
typical_cds_rare	Chr1	50944868	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B19,C21
lof_cds	Chr1	50944869	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B19,C21
typical_cds_rare	Chr1	50944869	GT	G	INDEL	1bp_deletion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B19,C21
lof_cds	Chr1	50944898	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B55,B86,C39
typical_cds_rare	Chr1	50944898	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	3	B55,B86,C39
typical_cds_rare	Chr1	50944909	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	2	B55,C39
lof_cds	Chr1	50944930	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	27	A18,B105,B12,B128,B132,B135,B15,B16,B17,B18,B26,B28,B32,B46,B49,B75,B76,B89,C14,C21,C34,C37,C74,C79,C8,D4,D8
lof_cds	Chr1	50945006	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B102
typical_cds_rare	Chr1	50945006	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B102
typical_cds_rare	Chr1	50945063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B109,B78,C6,C8,C82
lof_cds	Chr1	50945076	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B89
typical_cds_rare	Chr1	50945076	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	1	B89
lof_cds	Chr1	50945134	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	40	A1,B102,B107,B109,B11,B131,B134,B25,B33,B35,B37,B55,B57,B66,B70,B74,B78,B79,B82,B83,B85,B89,C17,C29,C3,C39,C41,C42,C44,C57,C59,C6,C76,C8,C81,C82,D1,D10,D6,D8
typical_cds_rare	Chr1	50945207	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	5	B105,B135,B16,B26,B75
lof_cds	Chr1	50945257	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC130990956	SmilChr01G003216	130990956	rna-XM_057915174.1,rna-XM_057915175.1,rna-XM_057915179.1,rna-XM_057915183.1	20	B102,B107,B11,B134,B25,B35,B57,B79,B88,B89,C17,C29,C39,C41,C42,C57,C6,C60,D1,D6