source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	51969634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	B1,C55,D8
typical_cds_rare	Chr1	51969635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	4	B46,B89,C3,D8
typical_cds_rare	Chr1	51969640	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	B1,C55,D8
typical_cds_rare	Chr1	51969656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	C25,C30,D3
typical_cds_rare	Chr1	51969674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	5	B13,B140,C26,C55,D8
typical_cds_rare	Chr1	51969709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B83
lof_cds	Chr1	51969794	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	B129,B59
typical_cds_rare	Chr1	51969794	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	B129,B59
lof_cds	Chr1	51969964	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	9	A16,A2,A8,B44,C16,C20,C68,C72,D1
lof_cds	Chr1	51969968	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	9	A16,A2,A8,B44,C16,C20,C68,C72,D1
lof_cds	Chr1	51969970	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	35	A16,A2,A8,B100,B115,B120,B134,B135,B19,B22,B28,B40,B42,B43,B44,B47,B54,B62,B95,B97,C16,C19,C2,C20,C22,C28,C34,C46,C48,C55,C59,C68,C72,D1,D3
lof_cds	Chr1	51969972	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	35	A16,A2,A8,B100,B115,B120,B134,B135,B19,B22,B28,B40,B42,B43,B44,B54,B62,B63,B95,B97,C16,C19,C2,C20,C22,C28,C34,C46,C48,C55,C59,C68,C72,D1,D3
lof_cds	Chr1	51969983	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	21	A21,A5,B134,B14,B18,B25,B34,B4,B51,B57,B60,B89,C31,C53,C60,C70,C76,C78,D10,D6,D9
lof_cds	Chr1	51969984	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	31	A16,A2,A8,B1,B100,B115,B120,B135,B19,B22,B28,B40,B43,B44,B47,B54,B63,B95,C19,C20,C28,C39,C42,C46,C48,C55,C61,C68,C72,D1,D3
lof_cds	Chr1	51969987	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	54	A16,A2,A21,A5,A8,B1,B100,B115,B120,B134,B135,B14,B18,B19,B22,B25,B28,B34,B4,B40,B43,B44,B47,B51,B54,B57,B60,B63,B89,B95,C19,C20,C22,C28,C31,C39,C42,C46,C48,C53,C55,C59,C60,C61,C68,C70,C72,C76,C78,D1,D10,D3,D6,D9
lof_cds	Chr1	51970001	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	9	A2,B1,B100,B115,B120,B135,B72,C39,C61
lof_cds	Chr1	51970036	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	23	A21,A5,B14,B18,B19,B25,B34,B4,B40,B51,B57,B87,B89,C31,C53,C60,C70,C76,C78,D10,D6,D8,D9
lof_cds	Chr1	51970057	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	32	A2,A8,B1,B100,B104,B114,B115,B127,B135,B15,B18,B19,B22,B43,B47,B51,B54,B63,B71,B78,B90,C20,C22,C28,C39,C42,C46,C85,C87,D1,D3,D8
typical_cds_rare	Chr1	51970076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	B104,D10
typical_cds_rare	Chr1	51970080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	B127,B15,D1
typical_cds_rare	Chr1	51970244	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	4	B5,B7,B73,B80
lof_cds	Chr1	51970415	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	42	A7,A9,B108,B11,B136,B137,B140,B15,B19,B20,B24,B25,B26,B29,B3,B37,B38,B4,B5,B58,B6,B63,B69,B7,B74,B75,B8,B82,C12,C16,C21,C24,C30,C44,C47,C5,C71,C72,C9,D11,D2,D3
typical_cds_rare	Chr1	51970418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	5	B67,B76,B80,C16,C75
typical_cds_rare	Chr1	51970426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	B51,B67,B97
typical_cds_rare	Chr1	51970449	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	5	B19,B4,B51,B67,C86
lof_cds	Chr1	51970465	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	15	A9,B11,B137,B38,B5,B58,B69,B7,B82,C16,C30,C47,C5,C72,C9
lof_cds	Chr1	51970469	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	15	A9,B11,B137,B38,B5,B58,B69,B7,B82,C16,C30,C47,C5,C72,C9
lof_cds	Chr1	51970596	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	C44
typical_cds_rare	Chr1	51970596	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	C44
typical_cds_rare	Chr1	51970607	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	5	B114,B99,C15,C72,C73
lof_cds	Chr1	51970867	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B3
typical_cds_rare	Chr1	51970867	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B3
typical_cds_rare	Chr1	51970916	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	B119,C17,D4
typical_cds_rare	Chr1	51970997	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	B72,B95,C47
typical_cds_rare	Chr1	51971037	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	4	B112,B36,C10,C50
typical_cds_rare	Chr1	51971039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	B36,D10
typical_cds_rare	Chr1	51971061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	C18,C46
typical_cds_rare	Chr1	51971069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B36
lof_cds	Chr1	51971075	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B36
typical_cds_rare	Chr1	51971075	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B36
lof_cds	Chr1	51971106	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	15	A10,A2,B132,B15,B19,B85,B98,C10,C12,C20,C23,C59,C75,C81,D10
lof_cds	Chr1	51971163	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	8	B132,C10,C12,C20,C23,C59,C75,C81
lof_cds	Chr1	51971166	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	8	B132,C10,C12,C20,C23,C59,C75,C81
typical_cds_rare	Chr1	51971168	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	5	B18,B32,B87,C40,C74
lof_cds	Chr1	51971174	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	9	B132,C10,C12,C20,C23,C59,C75,C81,D10
lof_cds	Chr1	51971179	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	9	B132,C10,C12,C20,C23,C59,C75,C81,D10
typical_cds_rare	Chr1	51971214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	C44
typical_cds_rare	Chr1	51971336	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	4	A5,B12,C61,C78
typical_cds_rare	Chr1	51971366	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	A5,C61,C78
typical_cds_rare	Chr1	51971439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	B60,B77
lof_cds	Chr1	51971453	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B60
typical_cds_rare	Chr1	51971453	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B60
typical_cds_rare	Chr1	51971556	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	B103,B105,B75
typical_cds_rare	Chr1	51971577	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	B104,D10
lof_cds	Chr1	51971581	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	14	A19,A25,B10,B102,B119,B137,B17,B28,B29,B62,B67,B74,C30,C45
typical_cds_rare	Chr1	51971601	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	C48
typical_cds_rare	Chr1	51971645	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	C44
typical_cds_rare	Chr1	51971675	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	4	B106,B53,B78,C15
typical_cds_rare	Chr1	51971730	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	D11
typical_cds_rare	Chr1	51971893	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	2	B37,C48
typical_cds_rare	Chr1	51972067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	3	A5,C61,C78
lof_cds	Chr1	51972208	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B45
typical_cds_rare	Chr1	51972208	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	B45
typical_cds_rare	Chr1	51972239	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009734	SmilChr01G003328	131009734	rna-XM_057937143.1	1	C58